RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 MPHOSPH8Q99549 860 aa15.52■□□□□ 0.08
PDPN-210ENST00000513143 PUS3Q9BZE2 481 aaKnown RBP15.52■□□□□ 0.08
PDPN-210ENST00000513143 RIPOR2Q9Y4F9 1068 aa15.52■□□□□ 0.08
PDPN-210ENST00000513143 CD2APQ9Y5K6 639 aa15.52■□□□□ 0.08
PDPN-210ENST00000513143 CHRNA5P30532 468 aa15.51■□□□□ 0.07
PDPN-210ENST00000513143 ALDH1B1P30837 517 aa15.51■□□□□ 0.07
PDPN-210ENST00000513143 IL15P40933 162 aaPredicted RBP15.51■□□□□ 0.07
PDPN-210ENST00000513143 LRRC24Q50LG9 513 aa15.51■□□□□ 0.07
PDPN-210ENST00000513143 ERC1Q8IUD2 1116 aa15.51■□□□□ 0.07
PDPN-210ENST00000513143 BSDC1Q9NW68 430 aaPredicted RBP15.51■□□□□ 0.07
PDPN-210ENST00000513143 CACNA1SQ13698 1873 aa15.51■□□□□ 0.07
PDPN-210ENST00000513143 BBOX1O75936 387 aa15.5■□□□□ 0.07
PDPN-210ENST00000513143 SASH1O94885 1247 aa15.5■□□□□ 0.07
PDPN-210ENST00000513143 OS9Q13438 667 aaPredicted RBP15.5■□□□□ 0.07
PDPN-210ENST00000513143 KIF1BPQ96EK5 621 aa15.5■□□□□ 0.07
PDPN-210ENST00000513143 CNNM1Q9NRU3 951 aa15.5■□□□□ 0.07
PDPN-210ENST00000513143 A0A1B0GUL6 1792 aa15.5■□□□□ 0.07
PDPN-210ENST00000513143 KCNA3P22001 575 aa15.49■□□□□ 0.07
PDPN-210ENST00000513143 RHPN1Q8TCX5 695 aa15.49■□□□□ 0.07
PDPN-210ENST00000513143 CNKSR1Q969H4 720 aa15.49■□□□□ 0.07
PDPN-210ENST00000513143 ZNF622Q969S3 477 aaKnown RBP eCLIP15.49■□□□□ 0.07
PDPN-210ENST00000513143 LRRCC1Q9C099 1032 aa15.49■□□□□ 0.07
PDPN-210ENST00000513143 SLX4Q8IY92 1834 aa15.49■□□□□ 0.07
PDPN-210ENST00000513143 BRCA1P38398 1863 aaKnown RBP15.49■□□□□ 0.07
PDPN-210ENST00000513143 A0A0G2JLW4 131 aa15.48■□□□□ 0.07
PDPN-210ENST00000513143 APBB1O00213 710 aa15.48■□□□□ 0.07
PDPN-210ENST00000513143 MYCNP04198 464 aaPredicted RBP15.48■□□□□ 0.07
PDPN-210ENST00000513143 DPEP1P16444 411 aa15.48■□□□□ 0.07
PDPN-210ENST00000513143 NUCB1Q02818 461 aa15.48■□□□□ 0.07
PDPN-210ENST00000513143 ANKRD45Q5TZF3 282 aa15.48■□□□□ 0.07
PDPN-210ENST00000513143 TMC4Q7Z404 712 aa15.48■□□□□ 0.07
PDPN-210ENST00000513143 MROH5Q6ZUA9 1318 aa15.48■□□□□ 0.07
PDPN-210ENST00000513143 LRRC37AA6NMS7 1700 aa15.48■□□□□ 0.07
PDPN-210ENST00000513143 CEP126Q9P2H0 1117 aa15.47■□□□□ 0.07
PDPN-210ENST00000513143 PPP1R1BQ9UD71 204 aaPredicted RBP15.47■□□□□ 0.07
PDPN-210ENST00000513143 MINPP1Q9UNW1 487 aa15.47■□□□□ 0.07
PDPN-210ENST00000513143 PPEF1O14829 653 aaPredicted RBP15.46■□□□□ 0.07
PDPN-210ENST00000513143 CHRNDQ07001 517 aa15.46■□□□□ 0.07
PDPN-210ENST00000513143 TFCP2Q12800 502 aa15.46■□□□□ 0.07
PDPN-210ENST00000513143 METTL24Q5JXM2 366 aa15.46■□□□□ 0.07
PDPN-210ENST00000513143 CHD1LQ86WJ1 897 aa15.46■□□□□ 0.07
PDPN-210ENST00000513143 VGLL2Q8N8G2 317 aa15.46■□□□□ 0.07
PDPN-210ENST00000513143 GPR108Q9NPR9 543 aa15.46■□□□□ 0.07
PDPN-210ENST00000513143 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.46■□□□□ 0.07
PDPN-210ENST00000513143 SMARCA5O60264 1052 aaPredicted RBP15.45■□□□□ 0.06
PDPN-210ENST00000513143 PDE8BO95263 885 aa15.45■□□□□ 0.06
PDPN-210ENST00000513143 PRPF40BQ6NWY9 871 aaKnown RBP15.45■□□□□ 0.06
PDPN-210ENST00000513143 SP8Q8IXZ3 490 aa15.45■□□□□ 0.06
PDPN-210ENST00000513143 KLHL34Q8N239 644 aa15.45■□□□□ 0.06
PDPN-210ENST00000513143 TTLL6Q8N841 843 aa15.45■□□□□ 0.06
PDPN-210ENST00000513143 IL1RAPL2Q9NP60 686 aa15.45■□□□□ 0.06
PDPN-210ENST00000513143 ZBTB47Q9UFB7 747 aaPredicted RBP15.45■□□□□ 0.06
PDPN-210ENST00000513143 ATP6V0A2Q9Y487 856 aa15.45■□□□□ 0.06
PDPN-210ENST00000513143 CLASRPQ8N2M8 674 aaKnown RBP15.44■□□□□ 0.06
PDPN-210ENST00000513143 LNPKQ9C0E8 428 aa15.44■□□□□ 0.06
PDPN-210ENST00000513143 ANKRD2Q9GZV1 360 aa15.44■□□□□ 0.06
PDPN-210ENST00000513143 PIM2Q9P1W9 311 aa15.44■□□□□ 0.06
PDPN-210ENST00000513143 TNNI3KQ59H18 835 aa15.43■□□□□ 0.06
PDPN-210ENST00000513143 NLGN2Q8NFZ4 835 aa15.43■□□□□ 0.06
PDPN-210ENST00000513143 HELBQ8NG08 1087 aaPredicted RBP15.43■□□□□ 0.06
PDPN-210ENST00000513143 C7orf43Q8WVR3 580 aa15.43■□□□□ 0.06
PDPN-210ENST00000513143 FHDC1Q9C0D6 1143 aaPredicted RBP15.43■□□□□ 0.06
PDPN-210ENST00000513143 AKAP2Q9Y2D5 859 aa15.43■□□□□ 0.06
PDPN-210ENST00000513143 FPGT-TNNI3KV9GXZ4 949 aa15.43■□□□□ 0.06
PDPN-210ENST00000513143 LTBP1Q14766 1721 aa15.43■□□□□ 0.06
PDPN-210ENST00000513143 TAF5LO75529 589 aa15.43■□□□□ 0.06
PDPN-210ENST00000513143 FGFR2P21802 821 aa15.43■□□□□ 0.06
PDPN-210ENST00000513143 SLC51AQ86UW1 340 aa15.43■□□□□ 0.06
PDPN-210ENST00000513143 EAF2Q96CJ1 260 aaPredicted RBP15.43■□□□□ 0.06
PDPN-210ENST00000513143 PODXL2Q9NZ53 605 aa15.43■□□□□ 0.06
PDPN-210ENST00000513143 ZNF609O15014 1411 aa15.42■□□□□ 0.06
PDPN-210ENST00000513143 XDHP47989 1333 aa15.42■□□□□ 0.06
PDPN-210ENST00000513143 A0A1B0GUL7 405 aa15.42■□□□□ 0.06
PDPN-210ENST00000513143 GPSM2P81274 684 aa15.42■□□□□ 0.06
PDPN-210ENST00000513143 UBE4AQ14139 1066 aa15.42■□□□□ 0.06
PDPN-210ENST00000513143 PUM3Q15397 648 aaKnown RBP15.42■□□□□ 0.06
PDPN-210ENST00000513143 AACSQ86V21 672 aa15.42■□□□□ 0.06
PDPN-210ENST00000513143 C16orf71Q8IYS4 520 aaPredicted RBP15.42■□□□□ 0.06
PDPN-210ENST00000513143 SYT17Q9BSW7 474 aa15.42■□□□□ 0.06
PDPN-210ENST00000513143 ARAP2Q8WZ64 1704 aa15.41■□□□□ 0.06
PDPN-210ENST00000513143 PDE4AP27815 886 aa15.41■□□□□ 0.06
PDPN-210ENST00000513143 TIMM10P62072 90 aa15.41■□□□□ 0.06
PDPN-210ENST00000513143 ATP2B3Q16720 1220 aa15.41■□□□□ 0.06
PDPN-210ENST00000513143 DALRD3Q5D0E6 543 aaKnown RBP15.41■□□□□ 0.06
PDPN-210ENST00000513143 CC2D2BQ6DHV5 1058 aa15.41■□□□□ 0.06
PDPN-210ENST00000513143 LPIN2Q92539 896 aa15.41■□□□□ 0.06
PDPN-210ENST00000513143 TMX4Q9H1E5 349 aaPredicted RBP15.41■□□□□ 0.06
PDPN-210ENST00000513143 ANKIB1Q9P2G1 1089 aa15.41■□□□□ 0.06
PDPN-210ENST00000513143 ARFGEF1Q9Y6D6 1849 aa15.4■□□□□ 0.06
PDPN-210ENST00000513143 SALL3Q9BXA9 1300 aa15.4■□□□□ 0.06
PDPN-210ENST00000513143 GRIPAP1Q4V328 841 aa15.4■□□□□ 0.06
PDPN-210ENST00000513143 OLFM4Q6UX06 510 aa15.4■□□□□ 0.06
PDPN-210ENST00000513143 CCDC8Q9H0W5 538 aaPredicted RBP15.4■□□□□ 0.06
PDPN-210ENST00000513143 BCL11AQ9H165 835 aa15.4■□□□□ 0.06
PDPN-210ENST00000513143 NSFL1CQ9UNZ2 370 aaKnown RBP15.4■□□□□ 0.06
PDPN-210ENST00000513143 LEMD3Q9Y2U8 911 aa15.4■□□□□ 0.06
PDPN-210ENST00000513143 SNED1Q8TER0 1413 aa15.39■□□□□ 0.05
PDPN-210ENST00000513143 ZNF804BA4D1E1 1349 aa15.39■□□□□ 0.05
PDPN-210ENST00000513143 WTIPA6NIX2 430 aaPredicted RBP15.39■□□□□ 0.05
PDPN-210ENST00000513143 SNAP23O00161 211 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms