RNA–Protein interactions for RNA: ENST00000512944.5

EXOC3-209, Transcript of exocyst complex component 3, human

APPRIS P1 TSL 1 (best) BASIC

Gene EXOC3, Length 2,825 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EXOC3-209	ENST00000512944	CCDC8	Q9H0W5	538 aa	Predicted RBP	30.06	■■■□□ 2.4
EXOC3-209	ENST00000512944	KCNA6	P17658	529 aa		30.06	■■■□□ 2.4
EXOC3-209	ENST00000512944	ADD1	P35611	737 aa	Known RBP	30.06	■■■□□ 2.4
EXOC3-209	ENST00000512944	CEP57L1	Q8IYX8	460 aa		30.06	■■■□□ 2.4
EXOC3-209	ENST00000512944	KIN	O60870	393 aa	Known RBP	30.05	■■■□□ 2.4
EXOC3-209	ENST00000512944	OSBPL5	Q9H0X9	879 aa	Predicted RBP	30.05	■■■□□ 2.4
EXOC3-209	ENST00000512944	ROBO2	Q9HCK4	1378 aa		30.05	■■■□□ 2.4
EXOC3-209	ENST00000512944	PNMA6A	P0CW24	399 aa	Predicted RBP	30.05	■■■□□ 2.4
EXOC3-209	ENST00000512944	FOSB	P53539	338 aa		30.05	■■■□□ 2.4
EXOC3-209	ENST00000512944	PDE4C	Q08493	712 aa		30.05	■■■□□ 2.4
EXOC3-209	ENST00000512944	CCDC93	Q567U6	631 aa		30.05	■■■□□ 2.4
EXOC3-209	ENST00000512944	BOLA2	Q9H3K6	86 aa		30.05	■■■□□ 2.4
EXOC3-209	ENST00000512944	TRERF1	Q96PN7	1200 aa		30.04	■■■□□ 2.4
EXOC3-209	ENST00000512944	HMG20B	Q9P0W2	317 aa		30.04	■■■□□ 2.4
EXOC3-209	ENST00000512944	HSP90B1	P14625	803 aa	Known RBP	30.04	■■■□□ 2.4
EXOC3-209	ENST00000512944	HNRNPH2	P55795	449 aa	Known RBP	30.04	■■■□□ 2.4
EXOC3-209	ENST00000512944	ARHGAP29	Q52LW3	1261 aa		30.04	■■■□□ 2.4
EXOC3-209	ENST00000512944	EAF2	Q96CJ1	260 aa	Predicted RBP	30.04	■■■□□ 2.4
EXOC3-209	ENST00000512944	RCOR1	Q9UKL0	485 aa		30.04	■■■□□ 2.4
EXOC3-209	ENST00000512944	MED23	Q9ULK4	1368 aa		30.04	■■■□□ 2.4
EXOC3-209	ENST00000512944	PLA2G4A	P47712	749 aa		30.03	■■■□□ 2.4
EXOC3-209	ENST00000512944	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	30.03	■■■□□ 2.4	5e-7	■■□□□ 12.5
EXOC3-209	ENST00000512944	TOPAZ1	Q8N9V7	1692 aa		30.03	■■■□□ 2.4
EXOC3-209	ENST00000512944	DNAJC2	Q99543	621 aa	Known RBP	30.03	■■■□□ 2.4
EXOC3-209	ENST00000512944	TLR7	Q9NYK1	1049 aa	Known RBP	30.03	■■■□□ 2.4
EXOC3-209	ENST00000512944	C9orf78	Q9NZ63	289 aa	Predicted RBP	30.03	■■■□□ 2.4
EXOC3-209	ENST00000512944	TSGA10IP	Q3SY00	556 aa		30.02	■■■□□ 2.4
EXOC3-209	ENST00000512944	IMPACT	Q9P2X3	320 aa		30.02	■■■□□ 2.4
EXOC3-209	ENST00000512944		Q6ZUG5	572 aa		30.01	■■■□□ 2.4
EXOC3-209	ENST00000512944	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	30.01	■■■□□ 2.4
EXOC3-209	ENST00000512944	ARMCX5	Q6P1M9	558 aa		30.01	■■■□□ 2.39
EXOC3-209	ENST00000512944	ENGASE	Q8NFI3	743 aa		30.01	■■■□□ 2.39
EXOC3-209	ENST00000512944	SASH1	O94885	1247 aa		30	■■■□□ 2.39
EXOC3-209	ENST00000512944	FAM160A1	Q05DH4	1040 aa		30	■■■□□ 2.39
EXOC3-209	ENST00000512944	MAPK8IP2	Q13387	824 aa	Predicted RBP	30	■■■□□ 2.39
EXOC3-209	ENST00000512944	GORAB	Q5T7V8	394 aa		30	■■■□□ 2.39
EXOC3-209	ENST00000512944	NAT10	Q9H0A0	1025 aa	Known RBP	30	■■■□□ 2.39
EXOC3-209	ENST00000512944	MYH15	Q9Y2K3	1946 aa		30	■■■□□ 2.39
EXOC3-209	ENST00000512944	SLC20A2	Q08357	652 aa		30	■■■□□ 2.39
EXOC3-209	ENST00000512944	EIF4A1	P60842	406 aa	Known RBP	30	■■■□□ 2.39
EXOC3-209	ENST00000512944	TMC6	Q7Z403	805 aa		30	■■■□□ 2.39
EXOC3-209	ENST00000512944	NEK1	Q96PY6	1258 aa		30	■■■□□ 2.39
EXOC3-209	ENST00000512944	USP28	Q96RU2	1077 aa		30	■■■□□ 2.39
EXOC3-209	ENST00000512944	FSIP1	Q8NA03	581 aa		29.99	■■■□□ 2.39
EXOC3-209	ENST00000512944	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	29.99	■■■□□ 2.39
EXOC3-209	ENST00000512944	PSD	A5PKW4	1024 aa	Predicted RBP	29.99	■■■□□ 2.39
EXOC3-209	ENST00000512944	TAF5L	O75529	589 aa		29.99	■■■□□ 2.39
EXOC3-209	ENST00000512944	SMC2	O95347	1197 aa		29.98	■■■□□ 2.39
EXOC3-209	ENST00000512944	SCRN1	Q12765	414 aa		29.98	■■■□□ 2.39
EXOC3-209	ENST00000512944	CCDC150	Q8NCX0	1101 aa		29.98	■■■□□ 2.39
EXOC3-209	ENST00000512944	XPO4	Q9C0E2	1151 aa	Known RBP	29.98	■■■□□ 2.39
EXOC3-209	ENST00000512944	NUTM2G	Q5VZR2	741 aa		29.98	■■■□□ 2.39
EXOC3-209	ENST00000512944	RBM33	Q96EV2	1170 aa	Known RBP	29.98	■■■□□ 2.39
EXOC3-209	ENST00000512944	KRT32	Q14532	448 aa		29.97	■■■□□ 2.39
EXOC3-209	ENST00000512944	JCAD	Q9P266	1359 aa		29.97	■■■□□ 2.39
EXOC3-209	ENST00000512944	SFPQ	P23246	707 aa	Known RBP eCLIP	29.97	■■■□□ 2.39
EXOC3-209	ENST00000512944	LTV1	Q96GA3	475 aa	Predicted RBP	29.97	■■■□□ 2.39
EXOC3-209	ENST00000512944	LRRC2	Q9BYS8	371 aa		29.97	■■■□□ 2.39
EXOC3-209	ENST00000512944	IFNK	Q9P0W0	207 aa		29.97	■■■□□ 2.39
EXOC3-209	ENST00000512944	ZRANB2	O95218	330 aa	Known RBP eCLIP	29.96	■■■□□ 2.39
EXOC3-209	ENST00000512944	ME1	P48163	572 aa		29.96	■■■□□ 2.39
EXOC3-209	ENST00000512944	POLR3G	O15318	223 aa	Predicted RBP	29.96	■■■□□ 2.39
EXOC3-209	ENST00000512944	G3BP1	Q13283	466 aa	Known RBP eCLIP	29.96	■■■□□ 2.39
EXOC3-209	ENST00000512944	HOMER1	Q86YM7	354 aa		29.96	■■■□□ 2.39
EXOC3-209	ENST00000512944	TMCO3	Q6UWJ1	677 aa		29.95	■■■□□ 2.39
EXOC3-209	ENST00000512944	IPO4	Q8TEX9	1081 aa	Known RBP	29.95	■■■□□ 2.39
EXOC3-209	ENST00000512944	SMARCC2	Q8TAQ2	1214 aa		29.95	■■■□□ 2.39
EXOC3-209	ENST00000512944	EDC3	Q96F86	508 aa	Known RBP	29.95	■■■□□ 2.39
EXOC3-209	ENST00000512944	KCNQ3	O43525	872 aa		29.95	■■■□□ 2.38
EXOC3-209	ENST00000512944	UBXN4	Q92575	508 aa		29.95	■■■□□ 2.38
EXOC3-209	ENST00000512944	ORC3	Q9UBD5	711 aa	Predicted RBP	29.95	■■■□□ 2.38
EXOC3-209	ENST00000512944	MAP3K2	Q9Y2U5	619 aa		29.95	■■■□□ 2.38
EXOC3-209	ENST00000512944	USPL1	Q5W0Q7	1092 aa		29.94	■■■□□ 2.38
EXOC3-209	ENST00000512944	ARGLU1	Q9NWB6	273 aa	Predicted RBP	29.94	■■■□□ 2.38
EXOC3-209	ENST00000512944	CWF19L2	Q2TBE0	894 aa	Known RBP	29.94	■■■□□ 2.38
EXOC3-209	ENST00000512944	NAA16	Q6N069	864 aa	Predicted RBP	29.94	■■■□□ 2.38
EXOC3-209	ENST00000512944	SDF4	Q9BRK5	362 aa		29.94	■■■□□ 2.38
EXOC3-209	ENST00000512944	DNAI1	Q9UI46	699 aa		29.93	■■■□□ 2.38
EXOC3-209	ENST00000512944	TEX35	Q5T0J7	233 aa		29.93	■■■□□ 2.38
EXOC3-209	ENST00000512944	USHBP1	Q8N6Y0	703 aa		29.93	■■■□□ 2.38
EXOC3-209	ENST00000512944	NEK11	Q8NG66	645 aa		29.93	■■■□□ 2.38
EXOC3-209	ENST00000512944	SIL1	Q9H173	461 aa		29.93	■■■□□ 2.38
EXOC3-209	ENST00000512944	COL15A1	P39059	1388 aa		29.92	■■■□□ 2.38
EXOC3-209	ENST00000512944	DPCR1	Q3MIW9	517 aa		29.92	■■■□□ 2.38
EXOC3-209	ENST00000512944	NSUN7	Q8NE18	718 aa	Known RBP	29.92	■■■□□ 2.38
EXOC3-209	ENST00000512944	HOXC9	P31274	260 aa		29.92	■■■□□ 2.38
EXOC3-209	ENST00000512944	ZNF396	Q96N95	335 aa	Predicted RBP	29.92	■■■□□ 2.38
EXOC3-209	ENST00000512944	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	29.91	■■■□□ 2.38
EXOC3-209	ENST00000512944	ETF1	P62495	437 aa	Known RBP	29.91	■■■□□ 2.38
EXOC3-209	ENST00000512944	NWD1	Q149M9	1564 aa		29.91	■■■□□ 2.38
EXOC3-209	ENST00000512944	ALDH1L1	O75891	902 aa		29.91	■■■□□ 2.38
EXOC3-209	ENST00000512944	KCNJ6	P48051	423 aa		29.91	■■■□□ 2.38
EXOC3-209	ENST00000512944	TUBB4A	P04350	444 aa		29.91	■■■□□ 2.38
EXOC3-209	ENST00000512944	HOXB7	P09629	217 aa		29.91	■■■□□ 2.38
EXOC3-209	ENST00000512944	RAD51AP2	Q09MP3	1159 aa		29.91	■■■□□ 2.38
EXOC3-209	ENST00000512944	FMR1NB	Q8N0W7	255 aa	Predicted RBP	29.91	■■■□□ 2.38
EXOC3-209	ENST00000512944	LGR6	Q9HBX8	967 aa		29.91	■■■□□ 2.38
EXOC3-209	ENST00000512944	NRDC	O43847	1150 aa		29.9	■■■□□ 2.38
EXOC3-209	ENST00000512944	SEC31A	O94979	1220 aa	Known RBP	29.9	■■■□□ 2.38
EXOC3-209	ENST00000512944	TPM4	P67936	248 aa		29.9	■■■□□ 2.38

Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms