RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 RPS12P25398 132 aaKnown RBP18.9■□□□□ 0.62
CCHCR1-229ENST00000512418 ZEB1P37275 1124 aaPredicted RBP18.9■□□□□ 0.62
CCHCR1-229ENST00000512418 MAP2K1Q02750 393 aaPredicted RBP18.9■□□□□ 0.62
CCHCR1-229ENST00000512418 TWISTNBQ3B726 338 aaPredicted RBP18.9■□□□□ 0.62
CCHCR1-229ENST00000512418 PAXIP1Q6ZW49 1069 aaPredicted RBP18.9■□□□□ 0.62
CCHCR1-229ENST00000512418 GLIS2Q9BZE0 524 aaPredicted RBP18.9■□□□□ 0.62
CCHCR1-229ENST00000512418 ZC3H12CQ9C0D7 883 aaKnown RBP18.9■□□□□ 0.62
CCHCR1-229ENST00000512418 ANKIB1Q9P2G1 1089 aa18.9■□□□□ 0.62
CCHCR1-229ENST00000512418 SHTN1A0MZ66 631 aa18.89■□□□□ 0.61
CCHCR1-229ENST00000512418 NEXNQ0ZGT2 675 aa18.89■□□□□ 0.61
CCHCR1-229ENST00000512418 DOK7Q18PE1 504 aa18.89■□□□□ 0.61
CCHCR1-229ENST00000512418 JARID2Q92833 1246 aaPredicted RBP18.89■□□□□ 0.61
CCHCR1-229ENST00000512418 CAPNS2Q96L46 248 aa18.89■□□□□ 0.61
CCHCR1-229ENST00000512418 GPR101Q96P66 508 aaPredicted RBP18.89■□□□□ 0.61
CCHCR1-229ENST00000512418 MRS2Q9HD23 443 aa18.89■□□□□ 0.61
CCHCR1-229ENST00000512418 RTL9Q8NET4 1388 aa18.89■□□□□ 0.61
CCHCR1-229ENST00000512418 CAPN15O75808 1086 aa18.88■□□□□ 0.61
CCHCR1-229ENST00000512418 UFL1O94874 794 aa18.88■□□□□ 0.61
CCHCR1-229ENST00000512418 CELF2O95319 508 aaKnown RBP18.88■□□□□ 0.61
CCHCR1-229ENST00000512418 IGKV5-2P06315 115 aa18.88■□□□□ 0.61
CCHCR1-229ENST00000512418 CDC37L1Q7L3B6 337 aa18.88■□□□□ 0.61
CCHCR1-229ENST00000512418 ANKRD18AQ8IVF6 992 aa18.88■□□□□ 0.61
CCHCR1-229ENST00000512418 CCDC85AQ96PX6 553 aaPredicted RBP18.88■□□□□ 0.61
CCHCR1-229ENST00000512418 GGA1Q9UJY5 639 aa18.88■□□□□ 0.61
CCHCR1-229ENST00000512418 CTSWP56202 376 aa18.87■□□□□ 0.61
CCHCR1-229ENST00000512418 CYP4F22Q6NT55 531 aa18.87■□□□□ 0.61
CCHCR1-229ENST00000512418 SAPCD2Q86UD0 394 aa18.87■□□□□ 0.61
CCHCR1-229ENST00000512418 SCN9AQ15858 1988 aa18.86■□□□□ 0.61
CCHCR1-229ENST00000512418 MYH3P11055 1940 aa18.86■□□□□ 0.61
CCHCR1-229ENST00000512418 XDHP47989 1333 aa18.86■□□□□ 0.61
CCHCR1-229ENST00000512418 ANP32CO43423 234 aa18.86■□□□□ 0.61
CCHCR1-229ENST00000512418 SAMD7Q7Z3H4 446 aa18.86■□□□□ 0.61
CCHCR1-229ENST00000512418 HHIPL1Q96JK4 782 aa18.86■□□□□ 0.61
CCHCR1-229ENST00000512418 CDC5LQ99459 802 aaKnown RBP18.86■□□□□ 0.61
CCHCR1-229ENST00000512418 KCNQ5Q9NR82 932 aa18.86■□□□□ 0.61
CCHCR1-229ENST00000512418 FANCIQ9NVI1 1328 aa18.85■□□□□ 0.61
CCHCR1-229ENST00000512418 NEURL1BA8MQ27 555 aa18.85■□□□□ 0.61
CCHCR1-229ENST00000512418 G3V3G9 751 aa18.85■□□□□ 0.61
CCHCR1-229ENST00000512418 SLC4A2P04920 1241 aa18.85■□□□□ 0.61
CCHCR1-229ENST00000512418 GRM1Q13255 1194 aa18.85■□□□□ 0.61
CCHCR1-229ENST00000512418 CWF19L2Q2TBE0 894 aaKnown RBP18.85■□□□□ 0.61
CCHCR1-229ENST00000512418 DCAF8Q5TAQ9 597 aa18.85■□□□□ 0.61
CCHCR1-229ENST00000512418 G2E3Q7L622 706 aa18.85■□□□□ 0.61
CCHCR1-229ENST00000512418 ZNF408Q9H9D4 720 aa18.85■□□□□ 0.61
CCHCR1-229ENST00000512418 EGFRP00533 1210 aa18.84■□□□□ 0.61
CCHCR1-229ENST00000512418 VIL1P09327 827 aaKnown RBP18.84■□□□□ 0.61
CCHCR1-229ENST00000512418 LBX1P52954 281 aa18.84■□□□□ 0.61
CCHCR1-229ENST00000512418 TBC1D10BQ4KMP7 808 aaPredicted RBP18.84■□□□□ 0.61
CCHCR1-229ENST00000512418 TTLL11Q8NHH1 800 aa18.84■□□□□ 0.61
CCHCR1-229ENST00000512418 ZNF609O15014 1411 aa18.83■□□□□ 0.61
CCHCR1-229ENST00000512418 HSPA8P11142 646 aaKnown RBP18.83■□□□□ 0.6
CCHCR1-229ENST00000512418 ATP2B4P23634 1241 aa18.83■□□□□ 0.6
CCHCR1-229ENST00000512418 MAP2K2P36507 400 aa18.83■□□□□ 0.6
CCHCR1-229ENST00000512418 FLIIQ13045 1269 aa18.83■□□□□ 0.6
CCHCR1-229ENST00000512418 BEGAINQ9BUH8 593 aa18.83■□□□□ 0.6
CCHCR1-229ENST00000512418 GREM2Q9H772 168 aa18.83■□□□□ 0.6
CCHCR1-229ENST00000512418 PSME4Q14997 1843 aa18.83■□□□□ 0.6
CCHCR1-229ENST00000512418 ZNF316A6NFI3 1004 aaPredicted RBP18.82■□□□□ 0.6
CCHCR1-229ENST00000512418 KIF4BQ2VIQ3 1234 aa18.82■□□□□ 0.6
CCHCR1-229ENST00000512418 UBE3BQ7Z3V4 1068 aa18.82■□□□□ 0.6
CCHCR1-229ENST00000512418 KRT26Q7Z3Y9 468 aa18.82■□□□□ 0.6
CCHCR1-229ENST00000512418 USP48Q86UV5 1035 aa18.82■□□□□ 0.6
CCHCR1-229ENST00000512418 WDR63Q8IWG1 891 aa18.82■□□□□ 0.6
CCHCR1-229ENST00000512418 BSDC1Q9NW68 430 aaPredicted RBP18.82■□□□□ 0.6
CCHCR1-229ENST00000512418 CACNA1FO60840 1977 aa18.82■□□□□ 0.6
CCHCR1-229ENST00000512418 H7C1W4 665 aa18.81■□□□□ 0.6
CCHCR1-229ENST00000512418 FKBP5Q13451 457 aaPredicted RBP18.81■□□□□ 0.6
CCHCR1-229ENST00000512418 RBM26Q5T8P6 1007 aaKnown RBP18.81■□□□□ 0.6
CCHCR1-229ENST00000512418 AGBL3Q8NEM8 1001 aa18.81■□□□□ 0.6
CCHCR1-229ENST00000512418 DCPSQ96C86 337 aaKnown RBP18.81■□□□□ 0.6
CCHCR1-229ENST00000512418 SPEF2Q9C093 1822 aa18.81■□□□□ 0.6
CCHCR1-229ENST00000512418 MED23Q9ULK4 1368 aa18.81■□□□□ 0.6
CCHCR1-229ENST00000512418 GCKRQ14397 625 aa18.8■□□□□ 0.6
CCHCR1-229ENST00000512418 RSBN1LQ6PCB5 846 aaPredicted RBP18.8■□□□□ 0.6
CCHCR1-229ENST00000512418 PODNQ7Z5L7 613 aa18.8■□□□□ 0.6
CCHCR1-229ENST00000512418 MYH16Q9H6N6 1097 aa18.8■□□□□ 0.6
CCHCR1-229ENST00000512418 MINPP1Q9UNW1 487 aa18.8■□□□□ 0.6
CCHCR1-229ENST00000512418 AOC2O75106 756 aa18.79■□□□□ 0.6
CCHCR1-229ENST00000512418 LINS1Q8NG48 757 aa18.79■□□□□ 0.6
CCHCR1-229ENST00000512418 DNAAF4Q8WXU2 420 aa18.79■□□□□ 0.6
CCHCR1-229ENST00000512418 PLA2G12BQ9BX93 195 aa18.79■□□□□ 0.6
CCHCR1-229ENST00000512418 SALL2Q9Y467 1007 aaPredicted RBP18.79■□□□□ 0.6
CCHCR1-229ENST00000512418 VAMP4O75379 141 aa18.78■□□□□ 0.6
CCHCR1-229ENST00000512418 IGHMBP2P38935 993 aaKnown RBP18.78■□□□□ 0.6
CCHCR1-229ENST00000512418 ZNF280AP59817 542 aaPredicted RBP18.78■□□□□ 0.6
CCHCR1-229ENST00000512418 GGA3Q9NZ52 723 aa18.78■□□□□ 0.6
CCHCR1-229ENST00000512418 POLR2AP24928 1970 aaKnown RBP18.77■□□□□ 0.6
CCHCR1-229ENST00000512418 USP17L3A6NCW0 530 aa18.77■□□□□ 0.6
CCHCR1-229ENST00000512418 USP17L4A6NCW7 530 aa18.77■□□□□ 0.6
CCHCR1-229ENST00000512418 ADM5C9JUS6 153 aa18.77■□□□□ 0.6
CCHCR1-229ENST00000512418 CCT4P50991 539 aaKnown RBP18.77■□□□□ 0.6
CCHCR1-229ENST00000512418 CASP7P55210 303 aa18.77■□□□□ 0.6
CCHCR1-229ENST00000512418 HUNKP57058 714 aa18.77■□□□□ 0.6
CCHCR1-229ENST00000512418 EXOSC9Q06265 439 aaKnown RBP18.77■□□□□ 0.6
CCHCR1-229ENST00000512418 DLK2Q6UY11 383 aa18.77■□□□□ 0.6
CCHCR1-229ENST00000512418 USP17L1Q7RTZ2 530 aa18.77■□□□□ 0.6
CCHCR1-229ENST00000512418 SULF1Q8IWU6 871 aa18.77■□□□□ 0.6
CCHCR1-229ENST00000512418 GMLQ99445 158 aa18.77■□□□□ 0.6
CCHCR1-229ENST00000512418 CA12O43570 354 aa18.76■□□□□ 0.59
CCHCR1-229ENST00000512418 USP17L8P0C7I0 530 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms