RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 MAP3K15Q6ZN16 1313 aa13.46□□□□□ -0.25
PDLIM5-217ENST00000512274 LAMB2P55268 1798 aa13.46□□□□□ -0.25
PDLIM5-217ENST00000512274 RIMBP2O15034 1052 aa13.46□□□□□ -0.25
PDLIM5-217ENST00000512274 HTATSF1O43719 755 aaKnown RBP13.46□□□□□ -0.25
PDLIM5-217ENST00000512274 FKTNO75072 461 aa13.46□□□□□ -0.25
PDLIM5-217ENST00000512274 NTSR2O95665 410 aa13.46□□□□□ -0.25
PDLIM5-217ENST00000512274 KIF4BQ2VIQ3 1234 aa13.46□□□□□ -0.25
PDLIM5-217ENST00000512274 KIF6Q6ZMV9 814 aa13.46□□□□□ -0.25
PDLIM5-217ENST00000512274 SP8Q8IXZ3 490 aa13.46□□□□□ -0.25
PDLIM5-217ENST00000512274 R3HDMLQ9H3Y0 253 aa13.46□□□□□ -0.25
PDLIM5-217ENST00000512274 KCNQ5Q9NR82 932 aa13.46□□□□□ -0.25
PDLIM5-217ENST00000512274 ERVV-1B6SEH8 477 aa13.45□□□□□ -0.26
PDLIM5-217ENST00000512274 EN2P19622 333 aaPredicted RBP13.45□□□□□ -0.26
PDLIM5-217ENST00000512274 RIPK4P57078 832 aa13.45□□□□□ -0.26
PDLIM5-217ENST00000512274 MCM10Q7L590 875 aa13.45□□□□□ -0.26
PDLIM5-217ENST00000512274 ZNF428Q96B54 188 aa13.45□□□□□ -0.26
PDLIM5-217ENST00000512274 SCAF8Q9UPN6 1271 aaKnown RBP13.45□□□□□ -0.26
PDLIM5-217ENST00000512274 UBE2Q2LH0YL09 131 aa13.44□□□□□ -0.26
PDLIM5-217ENST00000512274 MYL6BP14649 208 aa13.44□□□□□ -0.26
PDLIM5-217ENST00000512274 PPP1R42Q7Z4L9 355 aa13.44□□□□□ -0.26
PDLIM5-217ENST00000512274 ZNF34Q8IZ26 560 aa13.44□□□□□ -0.26
PDLIM5-217ENST00000512274 SPINK5Q9NQ38 1064 aaPredicted RBP13.44□□□□□ -0.26
PDLIM5-217ENST00000512274 SALL2Q9Y467 1007 aaPredicted RBP13.44□□□□□ -0.26
PDLIM5-217ENST00000512274 TRIM17Q9Y577 477 aa13.44□□□□□ -0.26
PDLIM5-217ENST00000512274 LAMB4A4D0S4 1761 aa13.43□□□□□ -0.26
PDLIM5-217ENST00000512274 DLG5Q8TDM6 1919 aa13.43□□□□□ -0.26
PDLIM5-217ENST00000512274 BBOX1O75936 387 aa13.43□□□□□ -0.26
PDLIM5-217ENST00000512274 ZNF853P0CG23 659 aa13.43□□□□□ -0.26
PDLIM5-217ENST00000512274 DCTN1Q14203 1278 aa13.43□□□□□ -0.26
PDLIM5-217ENST00000512274 DOK7Q18PE1 504 aa13.43□□□□□ -0.26
PDLIM5-217ENST00000512274 MIS18AQ9NYP9 233 aa13.43□□□□□ -0.26
PDLIM5-217ENST00000512274 IBTKQ9P2D0 1353 aaPredicted RBP13.43□□□□□ -0.26
PDLIM5-217ENST00000512274 TM4SF4P48230 202 aa13.42□□□□□ -0.26
PDLIM5-217ENST00000512274 RRP1P56182 461 aaKnown RBP13.42□□□□□ -0.26
PDLIM5-217ENST00000512274 TTLL12Q14166 644 aaPredicted RBP13.42□□□□□ -0.26
PDLIM5-217ENST00000512274 WASHC4Q2M389 1173 aa13.42□□□□□ -0.26
PDLIM5-217ENST00000512274 ANGEL2Q5VTE6 544 aaKnown RBP13.42□□□□□ -0.26
PDLIM5-217ENST00000512274 IFT57Q9NWB7 429 aa13.42□□□□□ -0.26
PDLIM5-217ENST00000512274 RBBP6Q7Z6E9 1792 aaKnown RBP13.42□□□□□ -0.26
PDLIM5-217ENST00000512274 DUOX1Q9NRD9 1551 aa13.41□□□□□ -0.26
PDLIM5-217ENST00000512274 ANKRD36CQ5JPF3 1778 aa13.41□□□□□ -0.26
PDLIM5-217ENST00000512274 ECE2O60344 883 aa13.41□□□□□ -0.26
PDLIM5-217ENST00000512274 HCLS1P14317 486 aaPredicted RBP13.41□□□□□ -0.26
PDLIM5-217ENST00000512274 SCARF1Q14162 830 aa13.41□□□□□ -0.26
PDLIM5-217ENST00000512274 PRAMEF18Q5VWM3 479 aa13.41□□□□□ -0.26
PDLIM5-217ENST00000512274 INTS3Q68E01 1043 aaKnown RBP13.41□□□□□ -0.26
PDLIM5-217ENST00000512274 RTF1Q92541 710 aaKnown RBP13.41□□□□□ -0.26
PDLIM5-217ENST00000512274 BABAM1Q9NWV8 329 aa13.41□□□□□ -0.26
PDLIM5-217ENST00000512274 C6orf229H3BNL8 230 aa13.4□□□□□ -0.26
PDLIM5-217ENST00000512274 RPS12P25398 132 aaKnown RBP13.4□□□□□ -0.26
PDLIM5-217ENST00000512274 GNAI1P63096 354 aa13.4□□□□□ -0.26
PDLIM5-217ENST00000512274 NOM1Q5C9Z4 860 aaKnown RBP13.4□□□□□ -0.26
PDLIM5-217ENST00000512274 DDX46Q7L014 1031 aaKnown RBP13.4□□□□□ -0.26
PDLIM5-217ENST00000512274 THUMPD2Q9BTF0 503 aaKnown RBP13.4□□□□□ -0.26
PDLIM5-217ENST00000512274 UTP14AQ9BVJ6 771 aaKnown RBP13.4□□□□□ -0.26
PDLIM5-217ENST00000512274 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.4□□□□□ -0.26
PDLIM5-217ENST00000512274 NSFL1CQ9UNZ2 370 aaKnown RBP13.4□□□□□ -0.26
PDLIM5-217ENST00000512274 RTL9Q8NET4 1388 aa13.4□□□□□ -0.26
PDLIM5-217ENST00000512274 FANCIQ9NVI1 1328 aa13.39□□□□□ -0.27
PDLIM5-217ENST00000512274 FKBP1BP68106 108 aa13.39□□□□□ -0.27
PDLIM5-217ENST00000512274 GRAPQ13588 217 aa13.39□□□□□ -0.27
PDLIM5-217ENST00000512274 NEUROD2Q15784 382 aa13.39□□□□□ -0.27
PDLIM5-217ENST00000512274 SLC10A5Q5PT55 438 aa13.39□□□□□ -0.27
PDLIM5-217ENST00000512274 GIGYF2Q6Y7W6 1299 aaKnown RBP13.39□□□□□ -0.27
PDLIM5-217ENST00000512274 OTOP1Q7RTM1 612 aa13.39□□□□□ -0.27
PDLIM5-217ENST00000512274 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.39□□□□□ -0.27
PDLIM5-217ENST00000512274 GRAPLQ8TC17 118 aaPredicted RBP13.39□□□□□ -0.27
PDLIM5-217ENST00000512274 SCN9AQ15858 1988 aa13.38□□□□□ -0.27
PDLIM5-217ENST00000512274 H0YGN5 161 aa13.38□□□□□ -0.27
PDLIM5-217ENST00000512274 PARP10Q53GL7 1025 aa13.38□□□□□ -0.27
PDLIM5-217ENST00000512274 DDX60Q8IY21 1712 aaKnown RBP13.37□□□□□ -0.27
PDLIM5-217ENST00000512274 SREBF2Q12772 1141 aa13.37□□□□□ -0.27
PDLIM5-217ENST00000512274 PRKG1Q13976 671 aa13.37□□□□□ -0.27
PDLIM5-217ENST00000512274 CHRDL2Q6WN34 429 aa13.37□□□□□ -0.27
PDLIM5-217ENST00000512274 OTUD5Q96G74 571 aa13.37□□□□□ -0.27
PDLIM5-217ENST00000512274 POLLQ9UGP5 575 aa13.37□□□□□ -0.27
PDLIM5-217ENST00000512274 TAF7Q15545 349 aaPredicted RBP13.36□□□□□ -0.27
PDLIM5-217ENST00000512274 TMEM106CQ9BVX2 250 aa13.36□□□□□ -0.27
PDLIM5-217ENST00000512274 PTPN22Q9Y2R2 807 aa13.36□□□□□ -0.27
PDLIM5-217ENST00000512274 LRRC37AA6NMS7 1700 aa13.36□□□□□ -0.27
PDLIM5-217ENST00000512274 MKI67P46013 3256 aaKnown RBP13.35□□□□□ -0.27
PDLIM5-217ENST00000512274 G3V3G9 751 aa13.35□□□□□ -0.27
PDLIM5-217ENST00000512274 CHL1O00533 1208 aa13.35□□□□□ -0.27
PDLIM5-217ENST00000512274 VIL1P09327 827 aaKnown RBP13.35□□□□□ -0.27
PDLIM5-217ENST00000512274 RARSP54136 660 aaKnown RBP13.35□□□□□ -0.27
PDLIM5-217ENST00000512274 GPSM2P81274 684 aa13.35□□□□□ -0.27
PDLIM5-217ENST00000512274 PTPN12Q05209 780 aaKnown RBP13.35□□□□□ -0.27
PDLIM5-217ENST00000512274 ALDH1L2Q3SY69 923 aa13.35□□□□□ -0.27
PDLIM5-217ENST00000512274 DCAF8Q5TAQ9 597 aa13.35□□□□□ -0.27
PDLIM5-217ENST00000512274 CD99L2Q8TCZ2 262 aa13.35□□□□□ -0.27
PDLIM5-217ENST00000512274 MYCP01106 439 aaPredicted RBP13.34□□□□□ -0.27
PDLIM5-217ENST00000512274 TCIRG1Q13488 830 aa13.34□□□□□ -0.27
PDLIM5-217ENST00000512274 AAMPQ13685 434 aa13.34□□□□□ -0.27
PDLIM5-217ENST00000512274 PDE3AQ14432 1141 aa13.34□□□□□ -0.27
PDLIM5-217ENST00000512274 CFHR5Q9BXR6 569 aa13.34□□□□□ -0.27
PDLIM5-217ENST00000512274 PPP4R2Q9NY27 417 aa13.34□□□□□ -0.27
PDLIM5-217ENST00000512274 RBM27Q9P2N5 1060 aaKnown RBP13.34□□□□□ -0.27
PDLIM5-217ENST00000512274 KIAA0100Q14667 2235 aaKnown RBP13.33□□□□□ -0.27
PDLIM5-217ENST00000512274 CELF1Q92879 486 aaKnown RBP13.33□□□□□ -0.28
PDLIM5-217ENST00000512274 EYA3Q99504 573 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms