RNA–Protein interactions for RNA: ENST00000512147.5

CLDND1-225, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-225ENST00000512147 HDGFL2Q7Z4V5 671 aaPredicted RBP8.82□□□□□ -1
CLDND1-225ENST00000512147 NBPF5PQ86XG9 351 aaPredicted RBP8.82□□□□□ -1
CLDND1-225ENST00000512147 NUTM1Q86Y26 1132 aa8.82□□□□□ -1
CLDND1-225ENST00000512147 TMX4Q9H1E5 349 aaPredicted RBP8.82□□□□□ -1
CLDND1-225ENST00000512147 BIN2Q9UBW5 565 aaPredicted RBP8.82□□□□□ -1
CLDND1-225ENST00000512147 TIMELESSQ9UNS1 1208 aa8.82□□□□□ -1
CLDND1-225ENST00000512147 ZNF646O15015 1829 aaPredicted RBP8.82□□□□□ -1
CLDND1-225ENST00000512147 GNRH1P01148 92 aa8.81□□□□□ -1
CLDND1-225ENST00000512147 NECAB2Q7Z6G3 386 aa8.81□□□□□ -1
CLDND1-225ENST00000512147 PPM1EQ8WY54 764 aa8.81□□□□□ -1
CLDND1-225ENST00000512147 PAWRQ96IZ0 340 aaKnown RBP8.81□□□□□ -1
CLDND1-225ENST00000512147 KCNH6Q9H252 994 aa8.81□□□□□ -1
CLDND1-225ENST00000512147 TTYH1Q9H313 450 aaPredicted RBP8.81□□□□□ -1
CLDND1-225ENST00000512147 C11orf16Q9NQ32 467 aa8.81□□□□□ -1
CLDND1-225ENST00000512147 A0A1W2PP64 1363 aa8.81□□□□□ -1
CLDND1-225ENST00000512147 NF2P35240 595 aa8.8□□□□□ -1
CLDND1-225ENST00000512147 UBXN2AP68543 259 aa8.8□□□□□ -1
CLDND1-225ENST00000512147 RRS1Q15050 365 aaKnown RBP8.8□□□□□ -1
CLDND1-225ENST00000512147 KIF4BQ2VIQ3 1234 aa8.8□□□□□ -1
CLDND1-225ENST00000512147 HSP90AB2PQ58FF8 381 aa8.8□□□□□ -1
CLDND1-225ENST00000512147 SUPT20HQ8NEM7 779 aa8.8□□□□□ -1
CLDND1-225ENST00000512147 KIF24Q5T7B8 1368 aa8.8□□□□□ -1
CLDND1-225ENST00000512147 COL2A1P02458 1487 aaPredicted RBP8.8□□□□□ -1
CLDND1-225ENST00000512147 TJP1Q07157 1748 aa8.8□□□□□ -1
CLDND1-225ENST00000512147 GRK4P32298 578 aa8.79□□□□□ -1
CLDND1-225ENST00000512147 PTPN12Q05209 780 aaKnown RBP8.79□□□□□ -1
CLDND1-225ENST00000512147 ANGEL2Q5VTE6 544 aaKnown RBP8.79□□□□□ -1
CLDND1-225ENST00000512147 TPTE2Q6XPS3 522 aa8.79□□□□□ -1
CLDND1-225ENST00000512147 NFATC2IPQ8NCF5 419 aa8.79□□□□□ -1
CLDND1-225ENST00000512147 FBXL18Q96ME1 805 aa8.79□□□□□ -1
CLDND1-225ENST00000512147 TBC1D2BQ9UPU7 963 aa8.79□□□□□ -1
CLDND1-225ENST00000512147 PRR33A8MZF0 331 aa8.78□□□□□ -1
CLDND1-225ENST00000512147 TCERG1O14776 1098 aaKnown RBP8.78□□□□□ -1
CLDND1-225ENST00000512147 MDM2Q00987 491 aaPredicted RBP8.78□□□□□ -1
CLDND1-225ENST00000512147 ARMC9Q7Z3E5 817 aa8.78□□□□□ -1
CLDND1-225ENST00000512147 NPM2Q86SE8 214 aaKnown RBP8.78□□□□□ -1
CLDND1-225ENST00000512147 SLC10A4Q96EP9 437 aa8.78□□□□□ -1
CLDND1-225ENST00000512147 TRIM47Q96LD4 638 aa8.78□□□□□ -1
CLDND1-225ENST00000512147 UIMC1Q96RL1 719 aa8.78□□□□□ -1
CLDND1-225ENST00000512147 EDC4Q6P2E9 1401 aaKnown RBP8.78□□□□□ -1
CLDND1-225ENST00000512147 ZBTB48P10074 688 aaPredicted RBP8.77□□□□□ -1.01
CLDND1-225ENST00000512147 BMP1P13497 986 aa8.77□□□□□ -1.01
CLDND1-225ENST00000512147 RPS12P25398 132 aaKnown RBP8.77□□□□□ -1.01
CLDND1-225ENST00000512147 ACAP1Q15027 740 aa8.77□□□□□ -1.01
CLDND1-225ENST00000512147 RAET1EQ8TD07 263 aa8.77□□□□□ -1.01
CLDND1-225ENST00000512147 ZNF330Q9Y3S2 320 aaPredicted RBP8.77□□□□□ -1.01
CLDND1-225ENST00000512147 KMT2BQ9UMN6 2715 aaPredicted RBP8.77□□□□□ -1.01
CLDND1-225ENST00000512147 ASTN2O75129 1339 aaPredicted RBP8.77□□□□□ -1.01
CLDND1-225ENST00000512147 ANKRD11Q6UB99 2663 aaPredicted RBP8.77□□□□□ -1.01
CLDND1-225ENST00000512147 TMC1Q8TDI8 760 aa8.76□□□□□ -1.01
CLDND1-225ENST00000512147 ZFYVE28Q9HCC9 887 aa8.76□□□□□ -1.01
CLDND1-225ENST00000512147 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.76□□□□□ -1.01
CLDND1-225ENST00000512147 RIPOR2Q9Y4F9 1068 aa8.76□□□□□ -1.01
CLDND1-225ENST00000512147 GTF2E1P29083 439 aaPredicted RBP8.75□□□□□ -1.01
CLDND1-225ENST00000512147 SMAD3P84022 425 aaKnown RBP8.75□□□□□ -1.01
CLDND1-225ENST00000512147 SCARF1Q14162 830 aa8.75□□□□□ -1.01
CLDND1-225ENST00000512147 AAK1Q2M2I8 961 aa8.75□□□□□ -1.01
CLDND1-225ENST00000512147 PRAMEF18Q5VWM3 479 aa8.75□□□□□ -1.01
CLDND1-225ENST00000512147 LBHD1Q9BQE6 289 aaPredicted RBP8.75□□□□□ -1.01
CLDND1-225ENST00000512147 UNC93B1Q9H1C4 597 aa8.75□□□□□ -1.01
CLDND1-225ENST00000512147 TSPYL2Q9H2G4 693 aaPredicted RBP8.75□□□□□ -1.01
CLDND1-225ENST00000512147 TERF2IPQ9NYB0 399 aa8.75□□□□□ -1.01
CLDND1-225ENST00000512147 TAOK2Q9UL54 1235 aa8.75□□□□□ -1.01
CLDND1-225ENST00000512147 TCF20Q9UGU0 1960 aaKnown RBP8.75□□□□□ -1.01
CLDND1-225ENST00000512147 ALPK3Q96L96 1907 aa8.74□□□□□ -1.01
CLDND1-225ENST00000512147 ST20-MTHFSA0A0A6YYL1 179 aa8.74□□□□□ -1.01
CLDND1-225ENST00000512147 PSMD14O00487 310 aa8.74□□□□□ -1.01
CLDND1-225ENST00000512147 WDHD1O75717 1129 aaPredicted RBP8.74□□□□□ -1.01
CLDND1-225ENST00000512147 HOXD10P28358 340 aa8.74□□□□□ -1.01
CLDND1-225ENST00000512147 MTHFSP49914 203 aa8.74□□□□□ -1.01
CLDND1-225ENST00000512147 LACTBP83111 547 aaPredicted RBP8.74□□□□□ -1.01
CLDND1-225ENST00000512147 KIAA2012Q0VF49 1180 aa8.74□□□□□ -1.01
CLDND1-225ENST00000512147 PRKG1Q13976 671 aa8.74□□□□□ -1.01
CLDND1-225ENST00000512147 LDLRAD1Q5T700 205 aa8.74□□□□□ -1.01
CLDND1-225ENST00000512147 RPGRQ92834 1020 aaKnown RBP8.74□□□□□ -1.01
CLDND1-225ENST00000512147 DEFB118Q96PH6 123 aa8.74□□□□□ -1.01
CLDND1-225ENST00000512147 ARHGAP39Q9C0H5 1083 aa8.74□□□□□ -1.01
CLDND1-225ENST00000512147 STARD3NLO95772 234 aa8.73□□□□□ -1.01
CLDND1-225ENST00000512147 GRIN2CQ14957 1233 aa8.73□□□□□ -1.01
CLDND1-225ENST00000512147 TAF1CQ15572 869 aaPredicted RBP8.73□□□□□ -1.01
CLDND1-225ENST00000512147 NBPF3Q9H094 633 aa8.73□□□□□ -1.01
CLDND1-225ENST00000512147 PTPRZ1P23471 2315 aaPredicted RBP8.72□□□□□ -1.01
CLDND1-225ENST00000512147 CHD6Q8TD26 2715 aa8.72□□□□□ -1.01
CLDND1-225ENST00000512147 YDJCA8MPS7 323 aa8.72□□□□□ -1.01
CLDND1-225ENST00000512147 PI4K2BG5E9Z4 385 aa8.72□□□□□ -1.01
CLDND1-225ENST00000512147 ZEB1P37275 1124 aaPredicted RBP8.72□□□□□ -1.01
CLDND1-225ENST00000512147 CSPP1Q1MSJ5 1256 aa8.72□□□□□ -1.01
CLDND1-225ENST00000512147 CRY2Q49AN0 593 aa8.72□□□□□ -1.01
CLDND1-225ENST00000512147 AKNAD1Q5T1N1 836 aa8.72□□□□□ -1.01
CLDND1-225ENST00000512147 POTEEQ6S8J3 1075 aa8.72□□□□□ -1.01
CLDND1-225ENST00000512147 DIS3LQ8TF46 1054 aaKnown RBP8.72□□□□□ -1.01
CLDND1-225ENST00000512147 WNK4Q96J92 1243 aa8.72□□□□□ -1.01
CLDND1-225ENST00000512147 PHOX2BQ99453 314 aa8.72□□□□□ -1.01
CLDND1-225ENST00000512147 GAS2L1Q99501 681 aaPredicted RBP8.72□□□□□ -1.01
CLDND1-225ENST00000512147 PTPN18Q99952 460 aa8.72□□□□□ -1.01
CLDND1-225ENST00000512147 RTFDC1Q9BY42 306 aaPredicted RBP8.72□□□□□ -1.01
CLDND1-225ENST00000512147 SRRDQ9UH36 339 aa8.72□□□□□ -1.01
CLDND1-225ENST00000512147 DACH1Q9UI36 760 aa8.72□□□□□ -1.01
CLDND1-225ENST00000512147 ANGEL1Q9UNK9 670 aaKnown RBP8.72□□□□□ -1.01
CLDND1-225ENST00000512147 TPRP12270 2363 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms