RNA–Protein interactions for RNA: ENST00000512070.6

TRIO-218, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 8,907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-218ENST00000512070 ORC3Q9UBD5 711 aaPredicted RBP16.42■□□□□ 0.22
TRIO-218ENST00000512070 DNA2P51530 1060 aa16.42■□□□□ 0.22
TRIO-218ENST00000512070 MYO1BO43795 1136 aa16.42■□□□□ 0.22
TRIO-218ENST00000512070 PRG4Q92954 1404 aaPredicted RBP16.42■□□□□ 0.22
TRIO-218ENST00000512070 TNNC1P63316 161 aa16.42■□□□□ 0.22
TRIO-218ENST00000512070 TBC1D9Q6ZT07 1266 aa16.42■□□□□ 0.22
TRIO-218ENST00000512070 CNGA4Q8IV77 575 aa16.42■□□□□ 0.22
TRIO-218ENST00000512070 CALM1P0DP23 149 aa16.42■□□□□ 0.22
TRIO-218ENST00000512070 CALM2P0DP24 149 aa16.42■□□□□ 0.22
TRIO-218ENST00000512070 CALM3P0DP25 149 aa16.42■□□□□ 0.22
TRIO-218ENST00000512070 HDAC1Q13547 482 aaPredicted RBP16.42■□□□□ 0.22
TRIO-218ENST00000512070 ESR2Q92731 530 aa16.42■□□□□ 0.22
TRIO-218ENST00000512070 TRIM7Q9C029 511 aa16.42■□□□□ 0.22
TRIO-218ENST00000512070 CPSF2Q9P2I0 782 aaKnown RBP16.42■□□□□ 0.22
TRIO-218ENST00000512070 MTUS1Q9ULD2 1270 aa16.42■□□□□ 0.22
TRIO-218ENST00000512070 SNX16P57768 344 aa16.41■□□□□ 0.22
TRIO-218ENST00000512070 MRPS9P82933 396 aaKnown RBP16.41■□□□□ 0.22
TRIO-218ENST00000512070 TTC31Q49AM3 519 aaPredicted RBP16.41■□□□□ 0.22
TRIO-218ENST00000512070 CAPN2P17655 700 aa16.41■□□□□ 0.22
TRIO-218ENST00000512070 NCBP1Q09161 790 aaKnown RBP16.41■□□□□ 0.22
TRIO-218ENST00000512070 HDXQ7Z353 690 aa16.41■□□□□ 0.22
TRIO-218ENST00000512070 MRPS27Q92552 414 aaKnown RBP16.41■□□□□ 0.22
TRIO-218ENST00000512070 NBPF11Q86T75 865 aa16.41■□□□□ 0.22
TRIO-218ENST00000512070 CPLX3Q8WVH0 158 aa16.41■□□□□ 0.22
TRIO-218ENST00000512070 ATRIPQ8WXE1 791 aa16.41■□□□□ 0.22
TRIO-218ENST00000512070 DHX37Q8IY37 1157 aaKnown RBP16.41■□□□□ 0.22
TRIO-218ENST00000512070 BICD1Q96G01 975 aa16.41■□□□□ 0.22
TRIO-218ENST00000512070 CWC25Q9NXE8 425 aaPredicted RBP16.41■□□□□ 0.22
TRIO-218ENST00000512070 TSPY2A6NKD2 308 aa16.4■□□□□ 0.22
TRIO-218ENST00000512070 GNAT2P19087 354 aa16.4■□□□□ 0.22
TRIO-218ENST00000512070 RTL9Q8NET4 1388 aa16.4■□□□□ 0.22
TRIO-218ENST00000512070 SMC1BQ8NDV3 1235 aa16.4■□□□□ 0.22
TRIO-218ENST00000512070 NOLC1Q14978 699 aaKnown RBP eCLIP16.4■□□□□ 0.22
TRIO-218ENST00000512070 TTC22Q5TAA0 569 aa16.4■□□□□ 0.22
TRIO-218ENST00000512070 TRIM14Q14142 442 aa16.4■□□□□ 0.22
TRIO-218ENST00000512070 CPLX4Q7Z7G2 160 aa16.4■□□□□ 0.22
TRIO-218ENST00000512070 PPFIBP2Q8ND30 876 aa16.4■□□□□ 0.22
TRIO-218ENST00000512070 SAMM50Q9Y512 469 aa16.4■□□□□ 0.22
TRIO-218ENST00000512070 SSFA2P28290 1259 aa16.4■□□□□ 0.22
TRIO-218ENST00000512070 VCX3BQ9H321 246 aa16.4■□□□□ 0.22
TRIO-218ENST00000512070 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.4■□□□□ 0.22
TRIO-218ENST00000512070 WTAPQ15007 396 aa16.4■□□□□ 0.22
TRIO-218ENST00000512070 SNX21Q969T3 373 aa16.4■□□□□ 0.22
TRIO-218ENST00000512070 CCDC160A6NGH7 325 aa16.39■□□□□ 0.22
TRIO-218ENST00000512070 ATP11AP98196 1134 aa16.39■□□□□ 0.22
TRIO-218ENST00000512070 STMN2Q93045 179 aa16.39■□□□□ 0.22
TRIO-218ENST00000512070 PUF60Q9UHX1 559 aaKnown RBP16.39■□□□□ 0.22
TRIO-218ENST00000512070 SCAF11Q99590 1463 aaKnown RBP16.39■□□□□ 0.21
TRIO-218ENST00000512070 MCM6Q14566 821 aa16.39■□□□□ 0.21
TRIO-218ENST00000512070 CACNA2D3Q8IZS8 1091 aa16.39■□□□□ 0.21
TRIO-218ENST00000512070 CCDC82Q8N4S0 544 aa16.39■□□□□ 0.21
TRIO-218ENST00000512070 NUDT16Q96DE0 195 aaKnown RBP16.39■□□□□ 0.21
TRIO-218ENST00000512070 PPP1R42Q7Z4L9 355 aa16.39■□□□□ 0.21
TRIO-218ENST00000512070 BRAPQ7Z569 592 aa16.39■□□□□ 0.21
TRIO-218ENST00000512070 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.39■□□□□ 0.211e-6■■■□□ 15.9
TRIO-218ENST00000512070 WDR78Q5VTH9 848 aa16.39■□□□□ 0.21
TRIO-218ENST00000512070 CCDC42Q96M95 316 aa16.39■□□□□ 0.21
TRIO-218ENST00000512070 LUC7L2Q9Y383 392 aaKnown RBP16.39■□□□□ 0.21
TRIO-218ENST00000512070 ZBTB43O43298 467 aa16.39■□□□□ 0.21
TRIO-218ENST00000512070 SYT1P21579 422 aa16.39■□□□□ 0.21
TRIO-218ENST00000512070 PPM1FP49593 454 aaPredicted RBP16.39■□□□□ 0.21
TRIO-218ENST00000512070 CCDC26Q8TAB7 109 aa16.39■□□□□ 0.21
TRIO-218ENST00000512070 FAM76AQ8TAV0 307 aa16.39■□□□□ 0.21
TRIO-218ENST00000512070 HAUS2Q9NVX0 235 aa16.39■□□□□ 0.21
TRIO-218ENST00000512070 NCOA1Q15788 1441 aa16.39■□□□□ 0.21
TRIO-218ENST00000512070 ASXL1Q8IXJ9 1541 aa16.38■□□□□ 0.21
TRIO-218ENST00000512070 FLIIQ13045 1269 aa16.38■□□□□ 0.21
TRIO-218ENST00000512070 ZKSCAN5Q9Y2L8 839 aa16.38■□□□□ 0.21
TRIO-218ENST00000512070 MICU3Q86XE3 530 aa16.38■□□□□ 0.21
TRIO-218ENST00000512070 AFAP1Q8N556 730 aa16.38■□□□□ 0.21
TRIO-218ENST00000512070 GSTA5Q7RTV2 222 aa16.38■□□□□ 0.21
TRIO-218ENST00000512070 AFAP1L2Q8N4X5 818 aa16.38■□□□□ 0.21
TRIO-218ENST00000512070 RRS1Q15050 365 aaKnown RBP16.38■□□□□ 0.21
TRIO-218ENST00000512070 POTEDQ86YR6 584 aa16.38■□□□□ 0.21
TRIO-218ENST00000512070 PPP1R1BQ9UD71 204 aaPredicted RBP16.38■□□□□ 0.21
TRIO-218ENST00000512070 VWA3BQ502W6 1294 aa16.38■□□□□ 0.21
TRIO-218ENST00000512070 C6orf50Q9HD87 102 aa16.38■□□□□ 0.21
TRIO-218ENST00000512070 STK24Q9Y6E0 443 aa16.38■□□□□ 0.21
TRIO-218ENST00000512070 CIB2O75838 187 aa16.37■□□□□ 0.21
TRIO-218ENST00000512070 CCDC94Q9BW85 323 aaPredicted RBP16.37■□□□□ 0.21
TRIO-218ENST00000512070 PRDM10Q9NQV6 1147 aa16.37■□□□□ 0.21
TRIO-218ENST00000512070 SH2D4BQ5SQS7 431 aa16.37■□□□□ 0.21
TRIO-218ENST00000512070 ARHGAP24Q8N264 748 aa16.37■□□□□ 0.21
TRIO-218ENST00000512070 VCXQ9H320 206 aa16.37■□□□□ 0.21
TRIO-218ENST00000512070 RSPH14Q9UHP6 348 aa16.37■□□□□ 0.21
TRIO-218ENST00000512070 SPDYE4A6NLX3 237 aa16.37■□□□□ 0.21
TRIO-218ENST00000512070 ANO6Q4KMQ2 910 aa16.37■□□□□ 0.21
TRIO-218ENST00000512070 CFAP157Q5JU67 520 aa16.37■□□□□ 0.21
TRIO-218ENST00000512070 NAP1L4Q99733 375 aaKnown RBP16.37■□□□□ 0.21
TRIO-218ENST00000512070 CCT2P78371 535 aaKnown RBP16.37■□□□□ 0.21
TRIO-218ENST00000512070 CALCOCO2Q13137 446 aa16.37■□□□□ 0.21
TRIO-218ENST00000512070 GIGYF1O75420 1035 aaPredicted RBP16.37■□□□□ 0.21
TRIO-218ENST00000512070 HS2ST1Q7LGA3 356 aa16.37■□□□□ 0.21
TRIO-218ENST00000512070 NEK11Q8NG66 645 aa16.37■□□□□ 0.21
TRIO-218ENST00000512070 TRMT112Q9UI30 125 aaKnown RBP16.37■□□□□ 0.21
TRIO-218ENST00000512070 NPHP3Q7Z494 1330 aa16.37■□□□□ 0.21
TRIO-218ENST00000512070 BIN1O00499 593 aa16.36■□□□□ 0.21
TRIO-218ENST00000512070 TRIM27P14373 513 aa16.36■□□□□ 0.21
TRIO-218ENST00000512070 RPL13P26373 211 aaKnown RBP16.36■□□□□ 0.21
TRIO-218ENST00000512070 PSMC4P43686 418 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms