RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 MINDY4BA8MYZ0 360 aa12.49□□□□□ -0.41
CPNE4-209ENST00000512055 DTNBO60941 627 aa12.49□□□□□ -0.41
CPNE4-209ENST00000512055 NAA25Q14CX7 972 aa12.49□□□□□ -0.41
CPNE4-209ENST00000512055 PIBF1Q8WXW3 757 aa12.49□□□□□ -0.41
CPNE4-209ENST00000512055 CCDC97Q96F63 343 aaPredicted RBP12.49□□□□□ -0.41
CPNE4-209ENST00000512055 UBAC1Q9BSL1 405 aa12.49□□□□□ -0.41
CPNE4-209ENST00000512055 TEX13AQ9BXU3 409 aaPredicted RBP12.49□□□□□ -0.41
CPNE4-209ENST00000512055 RSPH14Q9UHP6 348 aa12.49□□□□□ -0.41
CPNE4-209ENST00000512055 TTC41PQ6P2S7 1318 aa12.49□□□□□ -0.41
CPNE4-209ENST00000512055 ZNF213O14771 459 aa12.49□□□□□ -0.41
CPNE4-209ENST00000512055 CCDC6Q16204 474 aa12.49□□□□□ -0.41
CPNE4-209ENST00000512055 MAP3K11Q16584 847 aa12.49□□□□□ -0.41
CPNE4-209ENST00000512055 MICALL1Q8N3F8 863 aa12.49□□□□□ -0.41
CPNE4-209ENST00000512055 BRF1Q92994 677 aa12.49□□□□□ -0.41
CPNE4-209ENST00000512055 ACSBG1Q96GR2 724 aa12.49□□□□□ -0.41
CPNE4-209ENST00000512055 GIGYF2Q6Y7W6 1299 aaKnown RBP12.49□□□□□ -0.41
CPNE4-209ENST00000512055 LUC7LQ9NQ29 371 aaKnown RBP12.49□□□□□ -0.41
CPNE4-209ENST00000512055 PPRC1Q5VV67 1664 aaKnown RBP12.49□□□□□ -0.41
CPNE4-209ENST00000512055 HSPA4P34932 840 aa12.49□□□□□ -0.41
CPNE4-209ENST00000512055 AK2P54819 239 aa12.49□□□□□ -0.41
CPNE4-209ENST00000512055 DHX8Q14562 1220 aaKnown RBP12.49□□□□□ -0.41
CPNE4-209ENST00000512055 ZSCAN23Q3MJ62 389 aa12.49□□□□□ -0.41
CPNE4-209ENST00000512055 CCDC183Q5T5S1 534 aa12.49□□□□□ -0.41
CPNE4-209ENST00000512055 SAMD1Q6SPF0 538 aaPredicted RBP12.49□□□□□ -0.41
CPNE4-209ENST00000512055 CKAP2LQ8IYA6 745 aa12.49□□□□□ -0.41
CPNE4-209ENST00000512055 ZNF496Q96IT1 587 aaPredicted RBP12.49□□□□□ -0.41
CPNE4-209ENST00000512055 NAPBQ9H115 298 aa12.49□□□□□ -0.41
CPNE4-209ENST00000512055 NLRP1Q9C000 1473 aa12.49□□□□□ -0.41
CPNE4-209ENST00000512055 SF3B2Q13435 895 aaKnown RBP12.48□□□□□ -0.41
CPNE4-209ENST00000512055 JAKMIP3Q5VZ66 844 aa12.48□□□□□ -0.41
CPNE4-209ENST00000512055 HOXB7P09629 217 aa12.48□□□□□ -0.41
CPNE4-209ENST00000512055 TTC31Q49AM3 519 aaPredicted RBP12.48□□□□□ -0.41
CPNE4-209ENST00000512055 SCAND2PQ9GZW5 306 aaPredicted RBP12.48□□□□□ -0.41
CPNE4-209ENST00000512055 PTPN14Q15678 1187 aa12.48□□□□□ -0.41
CPNE4-209ENST00000512055 CNPY2Q9Y2B0 182 aa12.48□□□□□ -0.41
CPNE4-209ENST00000512055 SLC3A2P08195 630 aaKnown RBP12.48□□□□□ -0.41
CPNE4-209ENST00000512055 GBP6Q6ZN66 633 aa12.48□□□□□ -0.41
CPNE4-209ENST00000512055 SUCLG2Q96I99 432 aa12.48□□□□□ -0.41
CPNE4-209ENST00000512055 SLC52A2Q9HAB3 445 aa12.48□□□□□ -0.41
CPNE4-209ENST00000512055 ZSCAN22P10073 491 aaPredicted RBP12.47□□□□□ -0.41
CPNE4-209ENST00000512055 MAP9Q49MG5 647 aa12.47□□□□□ -0.41
CPNE4-209ENST00000512055 JMYQ8N9B5 988 aa12.47□□□□□ -0.41
CPNE4-209ENST00000512055 URI1O94763 535 aaPredicted RBP12.47□□□□□ -0.41
CPNE4-209ENST00000512055 IFFO1Q0D2I5 559 aa12.47□□□□□ -0.41
CPNE4-209ENST00000512055 ARHGAP29Q52LW3 1261 aa12.47□□□□□ -0.41
CPNE4-209ENST00000512055 SIRT2Q8IXJ6 389 aa12.47□□□□□ -0.41
CPNE4-209ENST00000512055 FEZ2Q9UHY8 353 aaPredicted RBP12.47□□□□□ -0.41
CPNE4-209ENST00000512055 ZNF652Q9Y2D9 606 aa12.47□□□□□ -0.41
CPNE4-209ENST00000512055 IGSF1Q8N6C5 1336 aa12.47□□□□□ -0.41
CPNE4-209ENST00000512055 GOLGA8BA8MQT2 603 aa12.47□□□□□ -0.41
CPNE4-209ENST00000512055 CDKL5O76039 1030 aa12.47□□□□□ -0.41
CPNE4-209ENST00000512055 MAP3K12Q12852 859 aa12.47□□□□□ -0.41
CPNE4-209ENST00000512055 ALKQ9UM73 1620 aa12.47□□□□□ -0.41
CPNE4-209ENST00000512055 RNF168Q8IYW5 571 aaPredicted RBP12.47□□□□□ -0.41
CPNE4-209ENST00000512055 TXLNBQ8N3L3 684 aa12.47□□□□□ -0.41
CPNE4-209ENST00000512055 NGLY1Q96IV0 654 aa12.47□□□□□ -0.41
CPNE4-209ENST00000512055 PPP1R1BQ9UD71 204 aaPredicted RBP12.47□□□□□ -0.41
CPNE4-209ENST00000512055 A1BGP04217 495 aa12.46□□□□□ -0.41
CPNE4-209ENST00000512055 SLC5A1P13866 664 aa12.46□□□□□ -0.41
CPNE4-209ENST00000512055 C6orf163Q5TEZ5 329 aa12.46□□□□□ -0.41
CPNE4-209ENST00000512055 SPECC1LQ69YQ0 1117 aa12.46□□□□□ -0.41
CPNE4-209ENST00000512055 CTR9Q6PD62 1173 aa12.46□□□□□ -0.41
CPNE4-209ENST00000512055 BANK1Q8NDB2 785 aa12.46□□□□□ -0.41
CPNE4-209ENST00000512055 C8orf76Q96K31 380 aa12.46□□□□□ -0.41
CPNE4-209ENST00000512055 RBM28Q9NW13 759 aaKnown RBP12.46□□□□□ -0.41
CPNE4-209ENST00000512055 HMG20BQ9P0W2 317 aa12.46□□□□□ -0.41
CPNE4-209ENST00000512055 USP25Q9UHP3 1055 aa12.46□□□□□ -0.41
CPNE4-209ENST00000512055 QRICH2Q9H0J4 1663 aa12.46□□□□□ -0.41
CPNE4-209ENST00000512055 GIGYF1O75420 1035 aaPredicted RBP12.46□□□□□ -0.41
CPNE4-209ENST00000512055 IL15P40933 162 aaPredicted RBP12.46□□□□□ -0.41
CPNE4-209ENST00000512055 SOGA3Q5TF21 947 aa12.46□□□□□ -0.41
CPNE4-209ENST00000512055 CCDC144CPQ8IYA2 1237 aa12.46□□□□□ -0.41
CPNE4-209ENST00000512055 C10orf67Q8IYJ2 551 aa12.46□□□□□ -0.41
CPNE4-209ENST00000512055 NDUFB9Q9Y6M9 179 aa12.46□□□□□ -0.41
CPNE4-209ENST00000512055 TIMM10P62072 90 aa12.46□□□□□ -0.42
CPNE4-209ENST00000512055 MCMDC2Q4G0Z9 681 aa12.46□□□□□ -0.42
CPNE4-209ENST00000512055 USP48Q86UV5 1035 aa12.46□□□□□ -0.42
CPNE4-209ENST00000512055 CREB3L3Q68CJ9 461 aa12.46□□□□□ -0.42
CPNE4-209ENST00000512055 SPECC1Q5M775 1068 aa12.45□□□□□ -0.42
CPNE4-209ENST00000512055 TCHPQ9BT92 498 aa12.45□□□□□ -0.42
CPNE4-209ENST00000512055 METTL22Q9BUU2 404 aaPredicted RBP12.45□□□□□ -0.42
CPNE4-209ENST00000512055 INO80Q9ULG1 1556 aaPredicted RBP12.45□□□□□ -0.42
CPNE4-209ENST00000512055 KIF18AQ8NI77 898 aa12.45□□□□□ -0.42
CPNE4-209ENST00000512055 IQSEC3Q9UPP2 1182 aaPredicted RBP12.45□□□□□ -0.42
CPNE4-209ENST00000512055 ATP2B3Q16720 1220 aa12.45□□□□□ -0.42
CPNE4-209ENST00000512055 CHST3Q7LGC8 479 aa12.45□□□□□ -0.42
CPNE4-209ENST00000512055 CCDC148Q8NFR7 591 aa12.45□□□□□ -0.42
CPNE4-209ENST00000512055 PAG1Q9NWQ8 432 aa12.45□□□□□ -0.42
CPNE4-209ENST00000512055 TULP4Q9NRJ4 1543 aa12.45□□□□□ -0.42
CPNE4-209ENST00000512055 IGSF3O75054 1194 aa12.44□□□□□ -0.42
CPNE4-209ENST00000512055 ZPR1O75312 459 aa12.44□□□□□ -0.42
CPNE4-209ENST00000512055 HELBQ8NG08 1087 aaPredicted RBP12.44□□□□□ -0.42
CPNE4-209ENST00000512055 FAM89AQ96GI7 184 aa12.44□□□□□ -0.42
CPNE4-209ENST00000512055 FAM227BQ96M60 508 aa12.44□□□□□ -0.42
CPNE4-209ENST00000512055 CDK12Q9NYV4 1490 aaPredicted RBP12.44□□□□□ -0.42
CPNE4-209ENST00000512055 CAVIN4Q5BKX8 364 aa12.44□□□□□ -0.42
CPNE4-209ENST00000512055 BTG4Q9NY30 223 aa12.44□□□□□ -0.42
CPNE4-209ENST00000512055 USP16Q9Y5T5 823 aa12.44□□□□□ -0.42
CPNE4-209ENST00000512055 KIF24Q5T7B8 1368 aa12.44□□□□□ -0.42
CPNE4-209ENST00000512055 DNM1Q05193 864 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms