RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 EPHA10Q5JZY3 1008 aa20.93■□□□□ 0.94
DDX41-213ENST00000512027 SRCIN1Q9C0H9 1055 aa20.93■□□□□ 0.94
DDX41-213ENST00000512027 GRM8O00222 908 aa20.92■□□□□ 0.94
DDX41-213ENST00000512027 ITGA6P23229 1130 aa20.92■□□□□ 0.94
DDX41-213ENST00000512027 EPS15P42566 896 aa20.92■□□□□ 0.94
DDX41-213ENST00000512027 APLP1P51693 650 aa20.92■□□□□ 0.94
DDX41-213ENST00000512027 FOXO4P98177 505 aa20.92■□□□□ 0.94
DDX41-213ENST00000512027 CHADLQ6NUI6 762 aa20.92■□□□□ 0.94
DDX41-213ENST00000512027 SMC4Q9NTJ3 1288 aa20.92■□□□□ 0.94
DDX41-213ENST00000512027 PODXL2Q9NZ53 605 aa20.92■□□□□ 0.94
DDX41-213ENST00000512027 ALDH1L1O75891 902 aa20.91■□□□□ 0.94
DDX41-213ENST00000512027 CSF1RP07333 972 aa20.91■□□□□ 0.94
DDX41-213ENST00000512027 CIAPIN1Q6FI81 312 aa20.91■□□□□ 0.94
DDX41-213ENST00000512027 KCNQ5Q9NR82 932 aa20.91■□□□□ 0.94
DDX41-213ENST00000512027 GGA1Q9UJY5 639 aa20.91■□□□□ 0.94
DDX41-213ENST00000512027 CHMP3Q9Y3E7 222 aa20.91■□□□□ 0.94
DDX41-213ENST00000512027 XDHP47989 1333 aa20.9■□□□□ 0.94
DDX41-213ENST00000512027 GMPSP49915 693 aaPredicted RBP20.9■□□□□ 0.94
DDX41-213ENST00000512027 HNRNPUQ00839 825 aaKnown RBP eCLIP20.9■□□□□ 0.94
DDX41-213ENST00000512027 EYA3Q99504 573 aa20.9■□□□□ 0.94
DDX41-213ENST00000512027 C9orf78Q9NZ63 289 aaPredicted RBP20.9■□□□□ 0.94
DDX41-213ENST00000512027 MINPP1Q9UNW1 487 aa20.9■□□□□ 0.94
DDX41-213ENST00000512027 CLEC11AQ9Y240 323 aa20.9■□□□□ 0.94
DDX41-213ENST00000512027 PTPRCP08575 1304 aa20.89■□□□□ 0.93
DDX41-213ENST00000512027 ECE2O60344 883 aa20.89■□□□□ 0.93
DDX41-213ENST00000512027 LMOD1P29536 600 aaPredicted RBP20.89■□□□□ 0.93
DDX41-213ENST00000512027 ALDH1L2Q3SY69 923 aa20.89■□□□□ 0.93
DDX41-213ENST00000512027 LDHDQ86WU2 507 aa20.89■□□□□ 0.93
DDX41-213ENST00000512027 BSDC1Q9NW68 430 aaPredicted RBP20.89■□□□□ 0.93
DDX41-213ENST00000512027 SHTN1A0MZ66 631 aa20.88■□□□□ 0.93
DDX41-213ENST00000512027 NBPF7P0C2Y1 421 aaPredicted RBP20.88■□□□□ 0.93
DDX41-213ENST00000512027 IGHMBP2P38935 993 aaKnown RBP20.88■□□□□ 0.93
DDX41-213ENST00000512027 LMBR1LQ6UX01 489 aa20.88■□□□□ 0.93
DDX41-213ENST00000512027 SUCLG2Q96I99 432 aa20.88■□□□□ 0.93
DDX41-213ENST00000512027 PSME4Q14997 1843 aa20.88■□□□□ 0.93
DDX41-213ENST00000512027 ZC3H12CQ9C0D7 883 aaKnown RBP20.87■□□□□ 0.93
DDX41-213ENST00000512027 GPRC5DQ9NZD1 345 aa20.87■□□□□ 0.93
DDX41-213ENST00000512027 ZBTB12Q9Y330 459 aaPredicted RBP20.87■□□□□ 0.93
DDX41-213ENST00000512027 ANKRD18BA2A2Z9 1011 aa20.86■□□□□ 0.93
DDX41-213ENST00000512027 PSMD14O00487 310 aa20.86■□□□□ 0.93
DDX41-213ENST00000512027 MAP1SQ66K74 1059 aaPredicted RBP20.86■□□□□ 0.93
DDX41-213ENST00000512027 KAZALD1Q96I82 304 aa20.86■□□□□ 0.93
DDX41-213ENST00000512027 ZNF594Q96JF6 807 aaPredicted RBP20.86■□□□□ 0.93
DDX41-213ENST00000512027 ZNF646O15015 1829 aaPredicted RBP20.85■□□□□ 0.93
DDX41-213ENST00000512027 ATP2B4P23634 1241 aa20.85■□□□□ 0.93
DDX41-213ENST00000512027 TNIP1Q15025 636 aa20.85■□□□□ 0.93
DDX41-213ENST00000512027 PNMA8AQ86V59 439 aaPredicted RBP20.85■□□□□ 0.93
DDX41-213ENST00000512027 MPHOSPH8Q99549 860 aa20.85■□□□□ 0.93
DDX41-213ENST00000512027 KLRK1P26718 216 aa20.84■□□□□ 0.93
DDX41-213ENST00000512027 CCT4P50991 539 aaKnown RBP20.84■□□□□ 0.93
DDX41-213ENST00000512027 IFIT5Q13325 482 aaKnown RBP20.84■□□□□ 0.93
DDX41-213ENST00000512027 NOB1Q9ULX3 412 aaKnown RBP20.84■□□□□ 0.93
DDX41-213ENST00000512027 G3V3G9 751 aa20.83■□□□□ 0.93
DDX41-213ENST00000512027 SNAP23O00161 211 aa20.83■□□□□ 0.93
DDX41-213ENST00000512027 CT47B1P0C2W7 299 aaPredicted RBP20.83■□□□□ 0.93
DDX41-213ENST00000512027 RARSP54136 660 aaKnown RBP20.83■□□□□ 0.93
DDX41-213ENST00000512027 CHRNDQ07001 517 aa20.83■□□□□ 0.93
DDX41-213ENST00000512027 DCAF8Q5TAQ9 597 aa20.83■□□□□ 0.93
DDX41-213ENST00000512027 TXNRD3Q86VQ6 643 aa20.83■□□□□ 0.93
DDX41-213ENST00000512027 DNAJC5GQ8N7S2 189 aa20.83■□□□□ 0.93
DDX41-213ENST00000512027 HELBQ8NG08 1087 aaPredicted RBP20.83■□□□□ 0.93
DDX41-213ENST00000512027 UTYO14607 1347 aa20.82■□□□□ 0.92
DDX41-213ENST00000512027 BICC1Q9H694 974 aaKnown RBP20.82■□□□□ 0.92
DDX41-213ENST00000512027 ADARB2Q9NS39 739 aaKnown RBP20.82■□□□□ 0.92
DDX41-213ENST00000512027 MED23Q9ULK4 1368 aa20.82■□□□□ 0.92
DDX41-213ENST00000512027 PASKQ96RG2 1323 aa20.81■□□□□ 0.92
DDX41-213ENST00000512027 TAF5LO75529 589 aa20.81■□□□□ 0.92
DDX41-213ENST00000512027 ITGBL1O95965 494 aaPredicted RBP20.81■□□□□ 0.92
DDX41-213ENST00000512027 FMR1Q06787 632 aaKnown RBP eCLIP20.81■□□□□ 0.92
DDX41-213ENST00000512027 MICALL2Q8IY33 904 aa20.81■□□□□ 0.92
DDX41-213ENST00000512027 TRPM4Q8TD43 1214 aa20.81■□□□□ 0.92
DDX41-213ENST00000512027 CNOT7Q9UIV1 285 aaKnown RBP20.81■□□□□ 0.92
DDX41-213ENST00000512027 CCDC57Q2TAC2 916 aa20.8■□□□□ 0.92
DDX41-213ENST00000512027 USP50Q70EL3 339 aaPredicted RBP20.8■□□□□ 0.92
DDX41-213ENST00000512027 CNTROBQ8N137 903 aa20.8■□□□□ 0.92
DDX41-213ENST00000512027 ANKRD44Q8N8A2 993 aa20.8■□□□□ 0.92
DDX41-213ENST00000512027 USP44Q9H0E7 712 aa20.8■□□□□ 0.92
DDX41-213ENST00000512027 ZNF804BA4D1E1 1349 aa20.79■□□□□ 0.92
DDX41-213ENST00000512027 EGFRP00533 1210 aa20.79■□□□□ 0.92
DDX41-213ENST00000512027 HIRAP54198 1017 aaPredicted RBP20.79■□□□□ 0.92
DDX41-213ENST00000512027 TAF7LQ5H9L4 462 aa20.79■□□□□ 0.92
DDX41-213ENST00000512027 ANKRD2Q9GZV1 360 aa20.79■□□□□ 0.92
DDX41-213ENST00000512027 SAMD7Q7Z3H4 446 aa20.78■□□□□ 0.92
DDX41-213ENST00000512027 PUS3Q9BZE2 481 aaKnown RBP20.78■□□□□ 0.92
DDX41-213ENST00000512027 TNNQ9UQP3 1299 aa20.78■□□□□ 0.92
DDX41-213ENST00000512027 LEMD3Q9Y2U8 911 aa20.78■□□□□ 0.92
DDX41-213ENST00000512027 PLIN1O60240 522 aa20.77■□□□□ 0.92
DDX41-213ENST00000512027 BCAR3O75815 825 aa20.77■□□□□ 0.92
DDX41-213ENST00000512027 VIL1P09327 827 aaKnown RBP20.77■□□□□ 0.92
DDX41-213ENST00000512027 KCNJ4P48050 445 aa20.77■□□□□ 0.92
DDX41-213ENST00000512027 BRPF1P55201 1214 aaPredicted RBP20.77■□□□□ 0.92
DDX41-213ENST00000512027 TBC1D10BQ4KMP7 808 aaPredicted RBP20.77■□□□□ 0.92
DDX41-213ENST00000512027 LDHAL6AQ6ZMR3 332 aa20.77■□□□□ 0.92
DDX41-213ENST00000512027 KLRG1Q96E93 195 aa20.77■□□□□ 0.92
DDX41-213ENST00000512027 CNNM1Q9NRU3 951 aa20.77■□□□□ 0.92
DDX41-213ENST00000512027 TRPM7Q96QT4 1865 aa20.76■□□□□ 0.91
DDX41-213ENST00000512027 TRAF5O00463 557 aa20.76■□□□□ 0.91
DDX41-213ENST00000512027 RABL6Q3YEC7 729 aaPredicted RBP20.76■□□□□ 0.91
DDX41-213ENST00000512027 DPF2Q92785 391 aa20.76■□□□□ 0.91
DDX41-213ENST00000512027 FBXW7Q969H0 707 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms