RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 FZD9O00144 591 aa7.53□□□□□ -1.2
RNF4-217ENST00000511892 APLP1P51693 650 aa7.53□□□□□ -1.2
RNF4-217ENST00000511892 HTRA3P83110 453 aa7.53□□□□□ -1.2
RNF4-217ENST00000511892 TRIM28Q13263 835 aaKnown RBP7.53□□□□□ -1.2
RNF4-217ENST00000511892 PDAP1Q13442 181 aaKnown RBP7.53□□□□□ -1.2
RNF4-217ENST00000511892 SMC1BQ8NDV3 1235 aa7.53□□□□□ -1.2
RNF4-217ENST00000511892 FAM89AQ96GI7 184 aa7.53□□□□□ -1.2
RNF4-217ENST00000511892 ATP6V0A2Q9Y487 856 aa7.53□□□□□ -1.2
RNF4-217ENST00000511892 DUOX1Q9NRD9 1551 aa7.53□□□□□ -1.2
RNF4-217ENST00000511892 IL16Q14005 1332 aa7.52□□□□□ -1.2
RNF4-217ENST00000511892 G3V3G9 751 aa7.52□□□□□ -1.21
RNF4-217ENST00000511892 GRIPAP1Q4V328 841 aa7.52□□□□□ -1.21
RNF4-217ENST00000511892 IFNLR1Q8IU57 520 aaPredicted RBP7.52□□□□□ -1.21
RNF4-217ENST00000511892 SP8Q8IXZ3 490 aa7.52□□□□□ -1.21
RNF4-217ENST00000511892 SPOCK2Q92563 424 aa7.52□□□□□ -1.21
RNF4-217ENST00000511892 HS3ST6Q96QI5 342 aa7.52□□□□□ -1.21
RNF4-217ENST00000511892 PSME4Q14997 1843 aa7.52□□□□□ -1.21
RNF4-217ENST00000511892 SCN9AQ15858 1988 aa7.51□□□□□ -1.21
RNF4-217ENST00000511892 TRPM7Q96QT4 1865 aa7.51□□□□□ -1.21
RNF4-217ENST00000511892 CCER2I3L3R5 266 aa7.51□□□□□ -1.21
RNF4-217ENST00000511892 BBOX1O75936 387 aa7.51□□□□□ -1.21
RNF4-217ENST00000511892 GRAPQ13588 217 aa7.51□□□□□ -1.21
RNF4-217ENST00000511892 SF3B3Q15393 1217 aaKnown RBP7.51□□□□□ -1.21
RNF4-217ENST00000511892 TWISTNBQ3B726 338 aaPredicted RBP7.51□□□□□ -1.21
RNF4-217ENST00000511892 RTL5Q5HYW3 569 aaPredicted RBP7.51□□□□□ -1.21
RNF4-217ENST00000511892 CCDC30Q5VVM6 783 aa7.51□□□□□ -1.21
RNF4-217ENST00000511892 DDX46Q7L014 1031 aaKnown RBP7.51□□□□□ -1.21
RNF4-217ENST00000511892 RIC3Q7Z5B4 369 aa7.51□□□□□ -1.21
RNF4-217ENST00000511892 GRAPLQ8TC17 118 aaPredicted RBP7.51□□□□□ -1.21
RNF4-217ENST00000511892 MYD88Q99836 296 aa7.51□□□□□ -1.21
RNF4-217ENST00000511892 TAF1DQ9H5J8 278 aaPredicted RBP7.51□□□□□ -1.21
RNF4-217ENST00000511892 SALL2Q9Y467 1007 aaPredicted RBP7.51□□□□□ -1.21
RNF4-217ENST00000511892 FANCIQ9NVI1 1328 aa7.51□□□□□ -1.21
RNF4-217ENST00000511892 IRS4O14654 1257 aaPredicted RBP7.5□□□□□ -1.21
RNF4-217ENST00000511892 IGKV5-2P06315 115 aa7.5□□□□□ -1.21
RNF4-217ENST00000511892 G2E3Q7L622 706 aa7.5□□□□□ -1.21
RNF4-217ENST00000511892 WDR63Q8IWG1 891 aa7.5□□□□□ -1.21
RNF4-217ENST00000511892 GPC2Q8N158 579 aa7.5□□□□□ -1.21
RNF4-217ENST00000511892 LARGE2Q8N3Y3 721 aa7.5□□□□□ -1.21
RNF4-217ENST00000511892 ZBTB38Q8NAP3 1195 aaPredicted RBP7.5□□□□□ -1.21
RNF4-217ENST00000511892 CCDC191Q8NCU4 936 aa7.5□□□□□ -1.21
RNF4-217ENST00000511892 JDP2Q8WYK2 163 aa7.5□□□□□ -1.21
RNF4-217ENST00000511892 JARID2Q92833 1246 aaPredicted RBP7.5□□□□□ -1.21
RNF4-217ENST00000511892 CELF1Q92879 486 aaKnown RBP7.5□□□□□ -1.21
RNF4-217ENST00000511892 METTL22Q9BUU2 404 aaPredicted RBP7.5□□□□□ -1.21
RNF4-217ENST00000511892 RTFDC1Q9BY42 306 aaPredicted RBP7.5□□□□□ -1.21
RNF4-217ENST00000511892 MAP3K2Q9Y2U5 619 aa7.5□□□□□ -1.21
RNF4-217ENST00000511892 A0A1B0GUL6 1792 aa7.5□□□□□ -1.21
RNF4-217ENST00000511892 ZNF646O15015 1829 aaPredicted RBP7.5□□□□□ -1.21
RNF4-217ENST00000511892 IQCA1LA6NCM1 817 aa7.49□□□□□ -1.21
RNF4-217ENST00000511892 PPIP5K2O43314 1243 aa7.49□□□□□ -1.21
RNF4-217ENST00000511892 VAMP4O75379 141 aa7.49□□□□□ -1.21
RNF4-217ENST00000511892 DDX58O95786 925 aaKnown RBP7.49□□□□□ -1.21
RNF4-217ENST00000511892 AOC3Q16853 763 aa7.49□□□□□ -1.21
RNF4-217ENST00000511892 DPP8Q6V1X1 898 aaPredicted RBP7.49□□□□□ -1.21
RNF4-217ENST00000511892 KSR2Q6VAB6 950 aa7.49□□□□□ -1.21
RNF4-217ENST00000511892 FAM9BQ8IZU0 186 aa7.49□□□□□ -1.21
RNF4-217ENST00000511892 MPNDQ8N594 471 aa7.49□□□□□ -1.21
RNF4-217ENST00000511892 CHMP4AQ9BY43 222 aa7.49□□□□□ -1.21
RNF4-217ENST00000511892 VPS33BQ9H267 617 aa7.49□□□□□ -1.21
RNF4-217ENST00000511892 SEC31BQ9NQW1 1179 aa7.49□□□□□ -1.21
RNF4-217ENST00000511892 CWC25Q9NXE8 425 aaPredicted RBP7.49□□□□□ -1.21
RNF4-217ENST00000511892 BOLA1Q9Y3E2 137 aa7.49□□□□□ -1.21
RNF4-217ENST00000511892 PI4KAP2A4QPH2 592 aa7.48□□□□□ -1.21
RNF4-217ENST00000511892 PCCAP05165 728 aaPredicted RBP7.48□□□□□ -1.21
RNF4-217ENST00000511892 EPHX2P34913 555 aa7.48□□□□□ -1.21
RNF4-217ENST00000511892 SCNN1DP51172 638 aa7.48□□□□□ -1.21
RNF4-217ENST00000511892 EIF6P56537 245 aaKnown RBP7.48□□□□□ -1.21
RNF4-217ENST00000511892 EXOSC9Q06265 439 aaKnown RBP7.48□□□□□ -1.21
RNF4-217ENST00000511892 KIAA2012Q0VF49 1180 aa7.48□□□□□ -1.21
RNF4-217ENST00000511892 TMC4Q7Z404 712 aa7.48□□□□□ -1.21
RNF4-217ENST00000511892 LDHDQ86WU2 507 aa7.48□□□□□ -1.21
RNF4-217ENST00000511892 NIM1KQ8IY84 436 aa7.48□□□□□ -1.21
RNF4-217ENST00000511892 PI4KAP1Q8N8J0 262 aa7.48□□□□□ -1.21
RNF4-217ENST00000511892 KLRG1Q96E93 195 aa7.48□□□□□ -1.21
RNF4-217ENST00000511892 STK31Q9BXU1 1019 aa7.48□□□□□ -1.21
RNF4-217ENST00000511892 KRTAP3-3Q9BYR6 98 aa7.48□□□□□ -1.21
RNF4-217ENST00000511892 KRTAP3-2Q9BYR7 98 aa7.48□□□□□ -1.21
RNF4-217ENST00000511892 TMX4Q9H1E5 349 aaPredicted RBP7.48□□□□□ -1.21
RNF4-217ENST00000511892 HACL1Q9UJ83 578 aa7.48□□□□□ -1.21
RNF4-217ENST00000511892 GJA3Q9Y6H8 435 aa7.48□□□□□ -1.21
RNF4-217ENST00000511892 PASKQ96RG2 1323 aa7.48□□□□□ -1.21
RNF4-217ENST00000511892 YDJCA8MPS7 323 aa7.47□□□□□ -1.21
RNF4-217ENST00000511892 NEURL1BA8MQ27 555 aa7.47□□□□□ -1.21
RNF4-217ENST00000511892 PDE8AO60658 829 aa7.47□□□□□ -1.21
RNF4-217ENST00000511892 ITGBL1O95965 494 aaPredicted RBP7.47□□□□□ -1.21
RNF4-217ENST00000511892 EPS15P42566 896 aa7.47□□□□□ -1.21
RNF4-217ENST00000511892 RPS8P62241 208 aaKnown RBP7.47□□□□□ -1.21
RNF4-217ENST00000511892 GPSM2P81274 684 aa7.47□□□□□ -1.21
RNF4-217ENST00000511892 CXCL9Q07325 125 aa7.47□□□□□ -1.21
RNF4-217ENST00000511892 CWF19L2Q2TBE0 894 aaKnown RBP7.47□□□□□ -1.21
RNF4-217ENST00000511892 EAPPQ56P03 285 aaPredicted RBP7.47□□□□□ -1.21
RNF4-217ENST00000511892 JMYQ8N9B5 988 aa7.47□□□□□ -1.21
RNF4-217ENST00000511892 SUPT20HQ8NEM7 779 aa7.47□□□□□ -1.21
RNF4-217ENST00000511892 CCDC85AQ96PX6 553 aaPredicted RBP7.47□□□□□ -1.21
RNF4-217ENST00000511892 POLLQ9UGP5 575 aa7.47□□□□□ -1.21
RNF4-217ENST00000511892 ZNRF3Q9ULT6 936 aa7.47□□□□□ -1.21
RNF4-217ENST00000511892 ZNF521Q96K83 1311 aa7.47□□□□□ -1.21
RNF4-217ENST00000511892 CDHR2Q9BYE9 1310 aa7.47□□□□□ -1.21
RNF4-217ENST00000511892 H7C1W4 665 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms