RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 AXIN2Q9Y2T1 843 aa11.52□□□□□ -0.57
POLR2J3-215ENST00000511313 CCDC196A0A1B0GTZ2 297 aa11.52□□□□□ -0.57
POLR2J3-215ENST00000511313 KDRP35968 1356 aa11.52□□□□□ -0.57
POLR2J3-215ENST00000511313 IDH1O75874 414 aaKnown RBP11.52□□□□□ -0.57
POLR2J3-215ENST00000511313 OSBPP22059 807 aa11.52□□□□□ -0.57
POLR2J3-215ENST00000511313 BIN2Q9UBW5 565 aaPredicted RBP11.52□□□□□ -0.57
POLR2J3-215ENST00000511313 USP17L3A6NCW0 530 aa11.51□□□□□ -0.57
POLR2J3-215ENST00000511313 USP17L4A6NCW7 530 aa11.51□□□□□ -0.57
POLR2J3-215ENST00000511313 EYA2O00167 538 aa11.51□□□□□ -0.57
POLR2J3-215ENST00000511313 GNAQP50148 359 aa11.51□□□□□ -0.57
POLR2J3-215ENST00000511313 USP17L1Q7RTZ2 530 aa11.51□□□□□ -0.57
POLR2J3-215ENST00000511313 CCDC12Q8WUD4 166 aaPredicted RBP11.51□□□□□ -0.57
POLR2J3-215ENST00000511313 UBAC1Q9BSL1 405 aa11.51□□□□□ -0.57
POLR2J3-215ENST00000511313 ZNRF3Q9ULT6 936 aa11.51□□□□□ -0.57
POLR2J3-215ENST00000511313 CDKL5O76039 1030 aa11.51□□□□□ -0.57
POLR2J3-215ENST00000511313 IARSP41252 1262 aaKnown RBP11.51□□□□□ -0.57
POLR2J3-215ENST00000511313 FKBP8Q14318 412 aa11.51□□□□□ -0.57
POLR2J3-215ENST00000511313 PPP2R3BQ9Y5P8 575 aa11.51□□□□□ -0.57
POLR2J3-215ENST00000511313 ST18O60284 1047 aa11.51□□□□□ -0.57
POLR2J3-215ENST00000511313 U3KPZ7 1027 aaPredicted RBP11.51□□□□□ -0.57
POLR2J3-215ENST00000511313 SYNE4Q8N205 404 aa11.5□□□□□ -0.57
POLR2J3-215ENST00000511313 IL17REQ8NFR9 667 aa11.5□□□□□ -0.57
POLR2J3-215ENST00000511313 WASF1Q92558 559 aa11.5□□□□□ -0.57
POLR2J3-215ENST00000511313 ITGA6P23229 1130 aa11.5□□□□□ -0.57
POLR2J3-215ENST00000511313 USP14P54578 494 aa11.5□□□□□ -0.57
POLR2J3-215ENST00000511313 CCDC174Q6PII3 467 aa11.5□□□□□ -0.57
POLR2J3-215ENST00000511313 RIMBP2O15034 1052 aa11.5□□□□□ -0.57
POLR2J3-215ENST00000511313 RRP1P56182 461 aaKnown RBP11.5□□□□□ -0.57
POLR2J3-215ENST00000511313 IMMTQ16891 758 aaKnown RBP11.5□□□□□ -0.57
POLR2J3-215ENST00000511313 FAM182BQ5T319 152 aa11.5□□□□□ -0.57
POLR2J3-215ENST00000511313 GOLGA6L4A6NEF3 574 aa11.49□□□□□ -0.57
POLR2J3-215ENST00000511313 PTMSP20962 102 aa11.49□□□□□ -0.57
POLR2J3-215ENST00000511313 RBM26Q5T8P6 1007 aaKnown RBP11.49□□□□□ -0.57
POLR2J3-215ENST00000511313 ANKRD1Q15327 319 aa11.49□□□□□ -0.57
POLR2J3-215ENST00000511313 ANP32BQ92688 251 aaKnown RBP11.49□□□□□ -0.57
POLR2J3-215ENST00000511313 CCDC102AQ96A19 550 aa11.49□□□□□ -0.57
POLR2J3-215ENST00000511313 NAPBQ9H115 298 aa11.49□□□□□ -0.57
POLR2J3-215ENST00000511313 GLT8D2Q9H1C3 349 aa11.49□□□□□ -0.57
POLR2J3-215ENST00000511313 KRI1Q8N9T8 703 aaKnown RBP11.49□□□□□ -0.57
POLR2J3-215ENST00000511313 R3HCC1Q9Y3T6 440 aaKnown RBP11.49□□□□□ -0.57
POLR2J3-215ENST00000511313 SLIT3O75094 1523 aa11.49□□□□□ -0.57
POLR2J3-215ENST00000511313 CA12O43570 354 aa11.48□□□□□ -0.57
POLR2J3-215ENST00000511313 KIF5BP33176 963 aa11.48□□□□□ -0.57
POLR2J3-215ENST00000511313 ZNF710Q8N1W2 664 aa11.48□□□□□ -0.57
POLR2J3-215ENST00000511313 ZNF408Q9H9D4 720 aa11.48□□□□□ -0.57
POLR2J3-215ENST00000511313 EIF5P55010 431 aaKnown RBP11.48□□□□□ -0.57
POLR2J3-215ENST00000511313 ATP2B2Q01814 1243 aa11.48□□□□□ -0.57
POLR2J3-215ENST00000511313 TRIM22Q8IYM9 498 aa11.48□□□□□ -0.57
POLR2J3-215ENST00000511313 TMTC2Q8N394 836 aa11.48□□□□□ -0.57
POLR2J3-215ENST00000511313 THUMPD2Q9BTF0 503 aaKnown RBP11.48□□□□□ -0.57
POLR2J3-215ENST00000511313 HMGB1P09429 215 aaKnown RBP11.48□□□□□ -0.57
POLR2J3-215ENST00000511313 BSDC1Q9NW68 430 aaPredicted RBP11.48□□□□□ -0.57
POLR2J3-215ENST00000511313 BCL9O00512 1426 aa11.48□□□□□ -0.57
POLR2J3-215ENST00000511313 CIAO1O76071 339 aa11.48□□□□□ -0.57
POLR2J3-215ENST00000511313 CAPN2P17655 700 aa11.48□□□□□ -0.57
POLR2J3-215ENST00000511313 CNNM2Q9H8M5 875 aa11.48□□□□□ -0.57
POLR2J3-215ENST00000511313 C22orf23Q9BZE7 217 aa11.47□□□□□ -0.57
POLR2J3-215ENST00000511313 SIL1Q9H173 461 aa11.47□□□□□ -0.57
POLR2J3-215ENST00000511313 RNF216Q9NWF9 866 aaPredicted RBP11.47□□□□□ -0.57
POLR2J3-215ENST00000511313 USP17L8P0C7I0 530 aa11.47□□□□□ -0.57
POLR2J3-215ENST00000511313 NFIXQ14938 502 aa11.47□□□□□ -0.57
POLR2J3-215ENST00000511313 CAMKK2Q96RR4 588 aa11.47□□□□□ -0.57
POLR2J3-215ENST00000511313 GPR108Q9NPR9 543 aa11.47□□□□□ -0.57
POLR2J3-215ENST00000511313 IRX3P78415 501 aaPredicted RBP11.47□□□□□ -0.57
POLR2J3-215ENST00000511313 GRM1Q13255 1194 aa11.47□□□□□ -0.57
POLR2J3-215ENST00000511313 AGBL3Q8NEM8 1001 aa11.47□□□□□ -0.57
POLR2J3-215ENST00000511313 SLC10A4Q96EP9 437 aa11.47□□□□□ -0.57
POLR2J3-215ENST00000511313 SEC63Q9UGP8 760 aaKnown RBP11.47□□□□□ -0.57
POLR2J3-215ENST00000511313 COG6Q9Y2V7 657 aa11.47□□□□□ -0.57
POLR2J3-215ENST00000511313 ZNF804BA4D1E1 1349 aa11.47□□□□□ -0.57
POLR2J3-215ENST00000511313 TRIM21P19474 475 aaKnown RBP11.47□□□□□ -0.57
POLR2J3-215ENST00000511313 MCTP2Q6DN12 878 aa11.47□□□□□ -0.57
POLR2J3-215ENST00000511313 CDC37L1Q7L3B6 337 aa11.47□□□□□ -0.57
POLR2J3-215ENST00000511313 HSCBQ8IWL3 235 aa11.47□□□□□ -0.57
POLR2J3-215ENST00000511313 DHX36Q9H2U1 1008 aaKnown RBP11.47□□□□□ -0.57
POLR2J3-215ENST00000511313 ATP6V1DQ9Y5K8 247 aa11.47□□□□□ -0.57
POLR2J3-215ENST00000511313 ECHDC1Q9NTX5 307 aa11.46□□□□□ -0.58
POLR2J3-215ENST00000511313 TTLL5Q6EMB2 1281 aa11.45□□□□□ -0.58
POLR2J3-215ENST00000511313 FAM184AQ8NB25 1140 aa11.45□□□□□ -0.58
POLR2J3-215ENST00000511313 RASSF8Q8NHQ8 419 aa11.45□□□□□ -0.58
POLR2J3-215ENST00000511313 PHACTR3Q96KR7 559 aa11.45□□□□□ -0.58
POLR2J3-215ENST00000511313 CCDC85AQ96PX6 553 aaPredicted RBP11.45□□□□□ -0.58
POLR2J3-215ENST00000511313 ATP6V0A2Q9Y487 856 aa11.45□□□□□ -0.58
POLR2J3-215ENST00000511313 WDR78Q5VTH9 848 aa11.45□□□□□ -0.58
POLR2J3-215ENST00000511313 NLRP10Q86W26 655 aa11.45□□□□□ -0.58
POLR2J3-215ENST00000511313 TMEM106CQ9BVX2 250 aa11.45□□□□□ -0.58
POLR2J3-215ENST00000511313 ARHGEF28Q8N1W1 1705 aaKnown RBP11.45□□□□□ -0.58
POLR2J3-215ENST00000511313 HCLS1P14317 486 aaPredicted RBP11.45□□□□□ -0.58
POLR2J3-215ENST00000511313 EVI5LQ96CN4 794 aa11.45□□□□□ -0.58
POLR2J3-215ENST00000511313 CCDC17Q96LX7 622 aa11.45□□□□□ -0.58
POLR2J3-215ENST00000511313 CCDC69A6NI79 296 aa11.45□□□□□ -0.58
POLR2J3-215ENST00000511313 FKBP1BP68106 108 aa11.45□□□□□ -0.58
POLR2J3-215ENST00000511313 PPP4R3AQ6IN85 833 aa11.45□□□□□ -0.58
POLR2J3-215ENST00000511313 USP50Q70EL3 339 aaPredicted RBP11.45□□□□□ -0.58
POLR2J3-215ENST00000511313 COL23A1Q86Y22 540 aaPredicted RBP11.45□□□□□ -0.58
POLR2J3-215ENST00000511313 ADARB2Q9NS39 739 aaKnown RBP11.45□□□□□ -0.58
POLR2J3-215ENST00000511313 C9orf131Q5VYM1 1079 aa11.44□□□□□ -0.58
POLR2J3-215ENST00000511313 SSH1Q8WYL5 1049 aa11.44□□□□□ -0.58
POLR2J3-215ENST00000511313 C21orf2O43822 256 aa11.44□□□□□ -0.58
POLR2J3-215ENST00000511313 ATP8B2P98198 1209 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms