RNA–Protein interactions for RNA: ENST00000511241.5

LINC01088-207, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2

Gene LINC01088, Length 679 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-207ENST00000511241 NDFIP2Q9NV92 336 aa11.74□□□□□ -0.53
LINC01088-207ENST00000511241 POLIQ9UNA4 740 aa11.74□□□□□ -0.53
LINC01088-207ENST00000511241 RTCBQ9Y3I0 505 aaKnown RBP11.74□□□□□ -0.53
LINC01088-207ENST00000511241 TRAPPC8Q9Y2L5 1435 aa11.74□□□□□ -0.53
LINC01088-207ENST00000511241 ATP10AO60312 1499 aa11.73□□□□□ -0.53
LINC01088-207ENST00000511241 TNP2Q05952 138 aa11.73□□□□□ -0.53
LINC01088-207ENST00000511241 PDE3BQ13370 1112 aa11.73□□□□□ -0.53
LINC01088-207ENST00000511241 GTPBP3Q969Y2 492 aaKnown RBP11.73□□□□□ -0.53
LINC01088-207ENST00000511241 LMTK3Q96Q04 1460 aa11.73□□□□□ -0.53
LINC01088-207ENST00000511241 ATXN7L1Q9ULK2 861 aaPredicted RBP11.73□□□□□ -0.53
LINC01088-207ENST00000511241 FNDC3AQ9Y2H6 1198 aaKnown RBP11.73□□□□□ -0.53
LINC01088-207ENST00000511241 CCDC18Q5T9S5 1454 aa11.72□□□□□ -0.53
LINC01088-207ENST00000511241 KHNYNO15037 678 aaKnown RBP11.72□□□□□ -0.53
LINC01088-207ENST00000511241 CEBPAP49715 358 aaPredicted RBP11.72□□□□□ -0.53
LINC01088-207ENST00000511241 EHHADHQ08426 723 aa11.72□□□□□ -0.53
LINC01088-207ENST00000511241 RGL4Q8IZJ4 473 aa11.72□□□□□ -0.53
LINC01088-207ENST00000511241 VWA5B2Q8N398 1253 aa11.72□□□□□ -0.53
LINC01088-207ENST00000511241 TTC16Q8NEE8 873 aa11.72□□□□□ -0.53
LINC01088-207ENST00000511241 ASB16Q96NS5 453 aa11.72□□□□□ -0.53
LINC01088-207ENST00000511241 TRERF1Q96PN7 1200 aa11.72□□□□□ -0.53
LINC01088-207ENST00000511241 KCNH4Q9UQ05 1017 aa11.72□□□□□ -0.53
LINC01088-207ENST00000511241 FYCO1Q9BQS8 1478 aa11.71□□□□□ -0.53
LINC01088-207ENST00000511241 CDC14CA4D256 554 aa11.71□□□□□ -0.53
LINC01088-207ENST00000511241 BNIP3LO60238 219 aa11.71□□□□□ -0.53
LINC01088-207ENST00000511241 MAPTP10636 758 aaKnown RBP11.71□□□□□ -0.53
LINC01088-207ENST00000511241 NUDT16Q96DE0 195 aaKnown RBP11.71□□□□□ -0.53
LINC01088-207ENST00000511241 CDC42BPBQ9Y5S2 1711 aa11.71□□□□□ -0.54
LINC01088-207ENST00000511241 ZNF518AQ6AHZ1 1483 aa11.7□□□□□ -0.54
LINC01088-207ENST00000511241 C9orf84Q5VXU9 1444 aa11.7□□□□□ -0.54
LINC01088-207ENST00000511241 DNAJC14Q6Y2X3 702 aaPredicted RBP11.7□□□□□ -0.54
LINC01088-207ENST00000511241 GJD3Q8N144 294 aa11.7□□□□□ -0.54
LINC01088-207ENST00000511241 CMTR1Q8N1G2 835 aaKnown RBP11.7□□□□□ -0.54
LINC01088-207ENST00000511241 DMRTB1Q96MA1 342 aa11.7□□□□□ -0.54
LINC01088-207ENST00000511241 MARK1Q9P0L2 795 aa11.7□□□□□ -0.54
LINC01088-207ENST00000511241 PREX2Q70Z35 1606 aa11.69□□□□□ -0.54
LINC01088-207ENST00000511241 DCDC2BA2VCK2 349 aa11.69□□□□□ -0.54
LINC01088-207ENST00000511241 FAM129BQ96TA1 746 aa11.69□□□□□ -0.54
LINC01088-207ENST00000511241 KDM5CP41229 1560 aa11.69□□□□□ -0.54
LINC01088-207ENST00000511241 ABCC1P33527 1531 aa11.69□□□□□ -0.54
LINC01088-207ENST00000511241 DIP2CQ9Y2E4 1556 aa11.68□□□□□ -0.54
LINC01088-207ENST00000511241 EGFRP00533 1210 aa11.68□□□□□ -0.54
LINC01088-207ENST00000511241 HNRNPMP52272 730 aaKnown RBP eCLIP11.68□□□□□ -0.54
LINC01088-207ENST00000511241 SFSWAPQ12872 951 aaKnown RBP11.68□□□□□ -0.54
LINC01088-207ENST00000511241 TMC1Q8TDI8 760 aa11.68□□□□□ -0.54
LINC01088-207ENST00000511241 ABHD17AQ96GS6 310 aa11.68□□□□□ -0.54
LINC01088-207ENST00000511241 EFCC1Q9HA90 598 aa11.68□□□□□ -0.54
LINC01088-207ENST00000511241 KCNMB2Q9Y691 235 aa11.68□□□□□ -0.54
LINC01088-207ENST00000511241 GPATCH8Q9UKJ3 1502 aaKnown RBP11.67□□□□□ -0.54
LINC01088-207ENST00000511241 H3BM21 787 aa11.67□□□□□ -0.54
LINC01088-207ENST00000511241 GRNP28799 593 aaKnown RBP11.67□□□□□ -0.54
LINC01088-207ENST00000511241 FAM182BQ5T319 152 aa11.67□□□□□ -0.54
LINC01088-207ENST00000511241 XKR5Q6UX68 686 aa11.67□□□□□ -0.54
LINC01088-207ENST00000511241 ABCA6Q8N139 1617 aa11.67□□□□□ -0.54
LINC01088-207ENST00000511241 LOC105371045A0A1W2PR82 267 aa11.66□□□□□ -0.54
LINC01088-207ENST00000511241 FGFR3P22607 806 aa11.66□□□□□ -0.54
LINC01088-207ENST00000511241 C8orf34Q49A92 452 aa11.66□□□□□ -0.54
LINC01088-207ENST00000511241 PDE12Q6L8Q7 609 aaKnown RBP11.66□□□□□ -0.54
LINC01088-207ENST00000511241 TMC7Q7Z402 723 aa11.66□□□□□ -0.54
LINC01088-207ENST00000511241 GGNBP2Q9H3C7 697 aa11.66□□□□□ -0.54
LINC01088-207ENST00000511241 USP20Q9Y2K6 914 aa11.66□□□□□ -0.54
LINC01088-207ENST00000511241 FER1L4A9Z1Z3 1794 aa11.66□□□□□ -0.54
LINC01088-207ENST00000511241 CDC42BPAQ5VT25 1732 aa11.66□□□□□ -0.54
LINC01088-207ENST00000511241 ZNF644Q9H582 1327 aaPredicted RBP11.65□□□□□ -0.54
LINC01088-207ENST00000511241 MLH3Q9UHC1 1453 aa11.65□□□□□ -0.54
LINC01088-207ENST00000511241 ANKRD33BA6NCL7 494 aa11.65□□□□□ -0.54
LINC01088-207ENST00000511241 UBAP1LF5GYI3 381 aa11.65□□□□□ -0.54
LINC01088-207ENST00000511241 XYLBO75191 536 aa11.65□□□□□ -0.54
LINC01088-207ENST00000511241 RGS22Q8NE09 1264 aa11.65□□□□□ -0.54
LINC01088-207ENST00000511241 SLC16A10Q8TF71 515 aa11.65□□□□□ -0.54
LINC01088-207ENST00000511241 CEP162Q5TB80 1403 aa11.65□□□□□ -0.54
LINC01088-207ENST00000511241 SAMD9LQ8IVG5 1584 aa11.65□□□□□ -0.54
LINC01088-207ENST00000511241 NEFLP07196 543 aa11.64□□□□□ -0.55
LINC01088-207ENST00000511241 CCINQ13939 588 aa11.64□□□□□ -0.55
LINC01088-207ENST00000511241 COL19A1Q14993 1142 aa11.64□□□□□ -0.55
LINC01088-207ENST00000511241 ALKBH8Q96BT7 664 aaKnown RBP11.64□□□□□ -0.55
LINC01088-207ENST00000511241 STRN4Q9NRL3 753 aa11.64□□□□□ -0.55
LINC01088-207ENST00000511241 ITSN2Q9NZM3 1697 aa11.64□□□□□ -0.55
LINC01088-207ENST00000511241 SYCP2Q9BX26 1530 aa11.64□□□□□ -0.55
LINC01088-207ENST00000511241 GPR25O00155 361 aa11.63□□□□□ -0.55
LINC01088-207ENST00000511241 TERTO14746 1132 aaKnown RBP11.63□□□□□ -0.55
LINC01088-207ENST00000511241 VSIG8P0DPA2 414 aa11.63□□□□□ -0.55
LINC01088-207ENST00000511241 TRIP4Q15650 581 aaPredicted RBP11.63□□□□□ -0.55
LINC01088-207ENST00000511241 GSX2Q9BZM3 304 aa11.63□□□□□ -0.55
LINC01088-207ENST00000511241 CFDP1Q9UEE9 299 aaPredicted RBP11.63□□□□□ -0.55
LINC01088-207ENST00000511241 MTUS2Q5JR59 1369 aa11.63□□□□□ -0.55
LINC01088-207ENST00000511241 KIDINS220Q9ULH0 1771 aa11.62□□□□□ -0.55
LINC01088-207ENST00000511241 TREHO43280 583 aa11.62□□□□□ -0.55
LINC01088-207ENST00000511241 IGHA2P01877 340 aa11.62□□□□□ -0.55
LINC01088-207ENST00000511241 VEGFBP49765 207 aa11.62□□□□□ -0.55
LINC01088-207ENST00000511241 CCNB3Q8WWL7 1395 aa11.62□□□□□ -0.55
LINC01088-207ENST00000511241 SPAG9O60271 1321 aaKnown RBP11.61□□□□□ -0.55
LINC01088-207ENST00000511241 CD33P20138 364 aa11.61□□□□□ -0.55
LINC01088-207ENST00000511241 PLCB3Q01970 1234 aa11.61□□□□□ -0.55
LINC01088-207ENST00000511241 SPEM2Q0P670 501 aa11.61□□□□□ -0.55
LINC01088-207ENST00000511241 ZNF438Q7Z4V0 828 aa11.61□□□□□ -0.55
LINC01088-207ENST00000511241 NLRP13Q86W25 1043 aa11.61□□□□□ -0.55
LINC01088-207ENST00000511241 HCN2Q9UL51 889 aa11.61□□□□□ -0.55
LINC01088-207ENST00000511241 REREQ9P2R6 1566 aa11.6□□□□□ -0.55
LINC01088-207ENST00000511241 GPR182O15218 404 aa11.6□□□□□ -0.55
LINC01088-207ENST00000511241 NEUROD1Q13562 356 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms