RNA–Protein interactions for RNA: ENST00000509980.5

EXOSC9-208, Transcript of exosome component 9, human

TSL 2

Gene EXOSC9, Length 1,317 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EXOSC9-208	ENST00000509980	KIAA0100	Q14667	2235 aa	Known RBP	13.83	□□□□□ -0.2
EXOSC9-208	ENST00000509980	COL4A1	P02462	1669 aa		13.83	□□□□□ -0.2
EXOSC9-208	ENST00000509980	ECE2	O60344	883 aa		13.83	□□□□□ -0.2
EXOSC9-208	ENST00000509980	FKTN	O75072	461 aa		13.83	□□□□□ -0.2
EXOSC9-208	ENST00000509980	ANGEL2	Q5VTE6	544 aa	Known RBP	13.83	□□□□□ -0.2
EXOSC9-208	ENST00000509980	POLL	Q9UGP5	575 aa		13.83	□□□□□ -0.2
EXOSC9-208	ENST00000509980	ZNF609	O15014	1411 aa		13.83	□□□□□ -0.2
EXOSC9-208	ENST00000509980	RIMBP2	O15034	1052 aa		13.82	□□□□□ -0.2
EXOSC9-208	ENST00000509980	VIL1	P09327	827 aa	Known RBP	13.82	□□□□□ -0.2
EXOSC9-208	ENST00000509980	ZNF280A	P59817	542 aa	Predicted RBP	13.82	□□□□□ -0.2
EXOSC9-208	ENST00000509980	INTS3	Q68E01	1043 aa	Known RBP	13.82	□□□□□ -0.2
EXOSC9-208	ENST00000509980	MOB2	Q70IA6	237 aa		13.82	□□□□□ -0.2
EXOSC9-208	ENST00000509980	PNISR	Q8TF01	805 aa	Known RBP	13.82	□□□□□ -0.2
EXOSC9-208	ENST00000509980	R3HDML	Q9H3Y0	253 aa		13.82	□□□□□ -0.2
EXOSC9-208	ENST00000509980	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.82	□□□□□ -0.2
EXOSC9-208	ENST00000509980	CENPF	P49454	3210 aa		13.81	□□□□□ -0.2
EXOSC9-208	ENST00000509980	CEP290	O15078	2479 aa		13.81	□□□□□ -0.2
EXOSC9-208	ENST00000509980	SCARF1	Q14162	830 aa		13.81	□□□□□ -0.2
EXOSC9-208	ENST00000509980	PDIA6	Q15084	440 aa		13.81	□□□□□ -0.2
EXOSC9-208	ENST00000509980	DOK7	Q18PE1	504 aa		13.81	□□□□□ -0.2
EXOSC9-208	ENST00000509980	NLRP10	Q86W26	655 aa		13.81	□□□□□ -0.2
EXOSC9-208	ENST00000509980	PITPNM2	Q9BZ72	1349 aa		13.81	□□□□□ -0.2
EXOSC9-208	ENST00000509980	LAMB1	P07942	1786 aa		13.8	□□□□□ -0.2
EXOSC9-208	ENST00000509980	TRIOBP	Q9H2D6	2365 aa		13.8	□□□□□ -0.2
EXOSC9-208	ENST00000509980	BRCA2	P51587	3418 aa		13.8	□□□□□ -0.2
EXOSC9-208	ENST00000509980	UBE2Q2L	H0YL09	131 aa		13.8	□□□□□ -0.2
EXOSC9-208	ENST00000509980	GPSM2	P81274	684 aa		13.8	□□□□□ -0.2
EXOSC9-208	ENST00000509980	THUMPD2	Q9BTF0	503 aa	Known RBP	13.8	□□□□□ -0.2
EXOSC9-208	ENST00000509980	COLQ	Q9Y215	455 aa	Predicted RBP	13.8	□□□□□ -0.2
EXOSC9-208	ENST00000509980	C6orf229	H3BNL8	230 aa		13.79	□□□□□ -0.2
EXOSC9-208	ENST00000509980	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.79	□□□□□ -0.2
EXOSC9-208	ENST00000509980	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
EXOSC9-208	ENST00000509980	CELF1	Q92879	486 aa	Known RBP	13.79	□□□□□ -0.2
EXOSC9-208	ENST00000509980	CFAP53	Q96M91	514 aa		13.79	□□□□□ -0.2
EXOSC9-208	ENST00000509980	NUDC	Q9Y266	331 aa		13.79	□□□□□ -0.2
EXOSC9-208	ENST00000509980	SH3TC1	Q8TE82	1336 aa		13.79	□□□□□ -0.2
EXOSC9-208	ENST00000509980	SREBF2	Q12772	1141 aa		13.78	□□□□□ -0.2
EXOSC9-208	ENST00000509980	TBC1D16	Q8TBP0	767 aa		13.78	□□□□□ -0.2
EXOSC9-208	ENST00000509980	EYA3	Q99504	573 aa		13.78	□□□□□ -0.2
EXOSC9-208	ENST00000509980	TRMT112	Q9UI30	125 aa	Known RBP	13.78	□□□□□ -0.2
EXOSC9-208	ENST00000509980	CLSPN	Q9HAW4	1339 aa		13.78	□□□□□ -0.2
EXOSC9-208	ENST00000509980	PROSER3	Q2NL68	480 aa		13.77	□□□□□ -0.21
EXOSC9-208	ENST00000509980	HSP90AB3P	Q58FF7	597 aa		13.77	□□□□□ -0.21
EXOSC9-208	ENST00000509980	OTOP1	Q7RTM1	612 aa		13.77	□□□□□ -0.21
EXOSC9-208	ENST00000509980	AGBL3	Q8NEM8	1001 aa		13.77	□□□□□ -0.21
EXOSC9-208	ENST00000509980	NECTIN2	Q92692	538 aa		13.77	□□□□□ -0.21
EXOSC9-208	ENST00000509980	GML	Q99445	158 aa		13.77	□□□□□ -0.21
EXOSC9-208	ENST00000509980	TRIM17	Q9Y577	477 aa		13.77	□□□□□ -0.21
EXOSC9-208	ENST00000509980	ZNF646	O15015	1829 aa	Predicted RBP	13.76	□□□□□ -0.21
EXOSC9-208	ENST00000509980	EN2	P19622	333 aa	Predicted RBP	13.76	□□□□□ -0.21
EXOSC9-208	ENST00000509980	CNGB1	Q14028	1251 aa	Predicted RBP	13.76	□□□□□ -0.21
EXOSC9-208	ENST00000509980	SF3B3	Q15393	1217 aa	Known RBP	13.76	□□□□□ -0.21
EXOSC9-208	ENST00000509980	PRAMEF18	Q5VWM3	479 aa		13.76	□□□□□ -0.21
EXOSC9-208	ENST00000509980	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.76	□□□□□ -0.21
EXOSC9-208	ENST00000509980	MYOZ2	Q9NPC6	264 aa		13.76	□□□□□ -0.21
EXOSC9-208	ENST00000509980	SCAF8	Q9UPN6	1271 aa	Known RBP	13.76	□□□□□ -0.21
EXOSC9-208	ENST00000509980	ALDH1A1	P00352	501 aa		13.75	□□□□□ -0.21
EXOSC9-208	ENST00000509980	ANXA1	P04083	346 aa		13.75	□□□□□ -0.21
EXOSC9-208	ENST00000509980	MKRN3	Q13064	507 aa	Known RBP	13.75	□□□□□ -0.21
EXOSC9-208	ENST00000509980	TCIRG1	Q13488	830 aa		13.75	□□□□□ -0.21
EXOSC9-208	ENST00000509980	ARMC5	Q96C12	935 aa		13.75	□□□□□ -0.21
EXOSC9-208	ENST00000509980	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.75	□□□□□ -0.21
EXOSC9-208	ENST00000509980	USP17L8	P0C7I0	530 aa		13.74	□□□□□ -0.21
EXOSC9-208	ENST00000509980	PODXL2	Q9NZ53	605 aa		13.74	□□□□□ -0.21
EXOSC9-208	ENST00000509980	PTPN22	Q9Y2R2	807 aa		13.74	□□□□□ -0.21
EXOSC9-208	ENST00000509980	CUL9	Q8IWT3	2517 aa		13.74	□□□□□ -0.21
EXOSC9-208	ENST00000509980	DLL1	O00548	723 aa		13.73	□□□□□ -0.21
EXOSC9-208	ENST00000509980	PTPN12	Q05209	780 aa	Known RBP	13.73	□□□□□ -0.21
EXOSC9-208	ENST00000509980	TTLL12	Q14166	644 aa	Predicted RBP	13.73	□□□□□ -0.21
EXOSC9-208	ENST00000509980	SPRYD7	Q5W111	196 aa		13.73	□□□□□ -0.21
EXOSC9-208	ENST00000509980	COPS6	Q7L5N1	327 aa		13.73	□□□□□ -0.21
EXOSC9-208	ENST00000509980	OTUD5	Q96G74	571 aa		13.73	□□□□□ -0.21
EXOSC9-208	ENST00000509980	EIF2S2	P20042	333 aa	Known RBP	13.72	□□□□□ -0.21
EXOSC9-208	ENST00000509980	NBPF9	Q3BBW0	867 aa		13.72	□□□□□ -0.21
EXOSC9-208	ENST00000509980	LDLRAD1	Q5T700	205 aa		13.72	□□□□□ -0.21
EXOSC9-208	ENST00000509980	XAGE3	Q8WTP9	111 aa		13.72	□□□□□ -0.21
EXOSC9-208	ENST00000509980	RPS8	P62241	208 aa	Known RBP	13.71	□□□□□ -0.21
EXOSC9-208	ENST00000509980	IFNL1	Q8IU54	200 aa		13.71	□□□□□ -0.21
EXOSC9-208	ENST00000509980	RANBP2	P49792	3224 aa	Known RBP	13.71	□□□□□ -0.22
EXOSC9-208	ENST00000509980		G3V3G9	751 aa		13.7	□□□□□ -0.22
EXOSC9-208	ENST00000509980	UFL1	O94874	794 aa		13.7	□□□□□ -0.22
EXOSC9-208	ENST00000509980	NF2	P35240	595 aa		13.7	□□□□□ -0.22
EXOSC9-208	ENST00000509980	INHBE	P58166	350 aa		13.7	□□□□□ -0.22
EXOSC9-208	ENST00000509980	AIMP1	Q12904	312 aa	Known RBP	13.7	□□□□□ -0.22
EXOSC9-208	ENST00000509980	DCAF8	Q5TAQ9	597 aa		13.7	□□□□□ -0.22
EXOSC9-208	ENST00000509980	ZNF428	Q96B54	188 aa		13.7	□□□□□ -0.22
EXOSC9-208	ENST00000509980	FAM89A	Q96GI7	184 aa		13.7	□□□□□ -0.22
EXOSC9-208	ENST00000509980	ERO1A	Q96HE7	468 aa		13.7	□□□□□ -0.22
EXOSC9-208	ENST00000509980	MANSC4	A6NHS7	340 aa	Predicted RBP	13.69	□□□□□ -0.22
EXOSC9-208	ENST00000509980		H0YGN5	161 aa		13.69	□□□□□ -0.22
EXOSC9-208	ENST00000509980	PPP2R1A	P30153	589 aa		13.69	□□□□□ -0.22
EXOSC9-208	ENST00000509980	ARMC9	Q7Z3E5	817 aa		13.69	□□□□□ -0.22
EXOSC9-208	ENST00000509980	ISCA1	Q9BUE6	129 aa		13.69	□□□□□ -0.22
EXOSC9-208	ENST00000509980	USP17L3	A6NCW0	530 aa		13.68	□□□□□ -0.22
EXOSC9-208	ENST00000509980	USP17L4	A6NCW7	530 aa		13.68	□□□□□ -0.22
EXOSC9-208	ENST00000509980	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
EXOSC9-208	ENST00000509980	WNT10B	O00744	389 aa		13.68	□□□□□ -0.22
EXOSC9-208	ENST00000509980	CAP1	Q01518	475 aa		13.68	□□□□□ -0.22
EXOSC9-208	ENST00000509980	USP17L1	Q7RTZ2	530 aa		13.68	□□□□□ -0.22
EXOSC9-208	ENST00000509980	PODN	Q7Z5L7	613 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms