RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 LCE2DQ5TA82 110 aaPredicted RBP7.08□□□□□ -1.28
NEK1-204ENST00000509912 RGL4Q8IZJ4 473 aa7.08□□□□□ -1.28
NEK1-204ENST00000509912 AKAP12Q02952 1782 aa7.07□□□□□ -1.28
NEK1-204ENST00000509912 METP08581 1390 aa7.07□□□□□ -1.28
NEK1-204ENST00000509912 PARD3Q8TEW0 1356 aa7.07□□□□□ -1.28
NEK1-204ENST00000509912 LMO7Q8WWI1 1683 aa7.07□□□□□ -1.28
NEK1-204ENST00000509912 QRICH2Q9H0J4 1663 aa7.07□□□□□ -1.28
NEK1-204ENST00000509912 LDHBP07195 334 aaKnown RBP7.07□□□□□ -1.28
NEK1-204ENST00000509912 HMGB2P26583 209 aaKnown RBP7.07□□□□□ -1.28
NEK1-204ENST00000509912 NIF3L1Q9GZT8 377 aa7.07□□□□□ -1.28
NEK1-204ENST00000509912 EGFL7Q9UHF1 273 aa7.07□□□□□ -1.28
NEK1-204ENST00000509912 PARP4Q9UKK3 1724 aaKnown RBP7.06□□□□□ -1.28
NEK1-204ENST00000509912 DNM1Q05193 864 aaKnown RBP7.06□□□□□ -1.28
NEK1-204ENST00000509912 TJAP1Q5JTD0 557 aa7.06□□□□□ -1.28
NEK1-204ENST00000509912 SREK1Q8WXA9 508 aaKnown RBP7.06□□□□□ -1.28
NEK1-204ENST00000509912 IQSEC3Q9UPP2 1182 aaPredicted RBP7.06□□□□□ -1.28
NEK1-204ENST00000509912 KLK14Q9P0G3 267 aa7.06□□□□□ -1.28
NEK1-204ENST00000509912 USP20Q9Y2K6 914 aa7.06□□□□□ -1.28
NEK1-204ENST00000509912 NINLQ9Y2I6 1382 aa7.06□□□□□ -1.28
NEK1-204ENST00000509912 NRKQ7Z2Y5 1582 aa7.06□□□□□ -1.28
NEK1-204ENST00000509912 ESPNB1AK53 854 aa7.05□□□□□ -1.28
NEK1-204ENST00000509912 LZTS3O60299 673 aaPredicted RBP7.05□□□□□ -1.28
NEK1-204ENST00000509912 FZD6O60353 706 aa7.05□□□□□ -1.28
NEK1-204ENST00000509912 EHHADHQ08426 723 aa7.05□□□□□ -1.28
NEK1-204ENST00000509912 ORC1Q13415 861 aa7.05□□□□□ -1.28
NEK1-204ENST00000509912 MEX3CQ5U5Q3 659 aaKnown RBP7.05□□□□□ -1.28
NEK1-204ENST00000509912 CPDO75976 1380 aa7.05□□□□□ -1.28
NEK1-204ENST00000509912 MYCP01106 439 aaPredicted RBP7.05□□□□□ -1.28
NEK1-204ENST00000509912 ADD1P35611 737 aaKnown RBP7.05□□□□□ -1.28
NEK1-204ENST00000509912 ZC3H6P61129 1189 aaKnown RBP7.05□□□□□ -1.28
NEK1-204ENST00000509912 TRIM32Q13049 653 aa7.05□□□□□ -1.28
NEK1-204ENST00000509912 DHX38Q92620 1227 aaKnown RBP7.05□□□□□ -1.28
NEK1-204ENST00000509912 VTI1AQ96AJ9 217 aa7.05□□□□□ -1.28
NEK1-204ENST00000509912 ACBD3Q9H3P7 528 aa7.05□□□□□ -1.28
NEK1-204ENST00000509912 RREB1Q92766 1687 aa7.05□□□□□ -1.28
NEK1-204ENST00000509912 F6X3S4 739 aa7.05□□□□□ -1.28
NEK1-204ENST00000509912 ATF3P18847 181 aa7.05□□□□□ -1.28
NEK1-204ENST00000509912 RAD51AP2Q09MP3 1159 aa7.05□□□□□ -1.28
NEK1-204ENST00000509912 MRPL58Q14197 206 aaKnown RBP7.05□□□□□ -1.28
NEK1-204ENST00000509912 GIMAP6Q6P9H5 292 aa7.05□□□□□ -1.28
NEK1-204ENST00000509912 PI16Q6UXB8 463 aa7.05□□□□□ -1.28
NEK1-204ENST00000509912 BRPF3Q9ULD4 1205 aa7.05□□□□□ -1.28
NEK1-204ENST00000509912 TNS3Q68CZ2 1445 aa7.04□□□□□ -1.28
NEK1-204ENST00000509912 NPHP3Q7Z494 1330 aa7.04□□□□□ -1.28
NEK1-204ENST00000509912 TREHO43280 583 aa7.04□□□□□ -1.28
NEK1-204ENST00000509912 EPHA4P54764 986 aa7.04□□□□□ -1.28
NEK1-204ENST00000509912 ZNF394Q53GI3 561 aa7.04□□□□□ -1.28
NEK1-204ENST00000509912 BRINP3Q76B58 766 aa7.04□□□□□ -1.28
NEK1-204ENST00000509912 SLC9A9Q8IVB4 645 aa7.04□□□□□ -1.28
NEK1-204ENST00000509912 DRC1Q96MC2 740 aa7.04□□□□□ -1.28
NEK1-204ENST00000509912 HCN4Q9Y3Q4 1203 aa7.04□□□□□ -1.28
NEK1-204ENST00000509912 ROBO2Q9HCK4 1378 aa7.04□□□□□ -1.28
NEK1-204ENST00000509912 IGHA2P01877 340 aa7.04□□□□□ -1.28
NEK1-204ENST00000509912 SF3B2Q13435 895 aaKnown RBP7.04□□□□□ -1.28
NEK1-204ENST00000509912 C16orf46Q6P387 395 aa7.04□□□□□ -1.28
NEK1-204ENST00000509912 QTRT2Q9H974 415 aaKnown RBP7.04□□□□□ -1.28
NEK1-204ENST00000509912 CLSPNQ9HAW4 1339 aa7.04□□□□□ -1.28
NEK1-204ENST00000509912 RALGAPBQ86X10 1494 aa7.04□□□□□ -1.28
NEK1-204ENST00000509912 TNFRSF10BO14763 440 aa7.03□□□□□ -1.28
NEK1-204ENST00000509912 XPCQ01831 940 aaPredicted RBP7.03□□□□□ -1.28
NEK1-204ENST00000509912 RNF20Q5VTR2 975 aa7.03□□□□□ -1.28
NEK1-204ENST00000509912 VTI1BQ9UEU0 232 aa7.03□□□□□ -1.28
NEK1-204ENST00000509912 SSH2Q76I76 1423 aa7.03□□□□□ -1.28
NEK1-204ENST00000509912 ZNF831Q5JPB2 1677 aa7.03□□□□□ -1.28
NEK1-204ENST00000509912 MON2Q7Z3U7 1717 aa7.03□□□□□ -1.28
NEK1-204ENST00000509912 PPM1GO15355 546 aaPredicted RBP7.03□□□□□ -1.28
NEK1-204ENST00000509912 NR3C2P08235 984 aa7.03□□□□□ -1.28
NEK1-204ENST00000509912 DNAJA1P31689 397 aaKnown RBP7.03□□□□□ -1.28
NEK1-204ENST00000509912 ETFBKMTQ8IXQ9 262 aa7.03□□□□□ -1.28
NEK1-204ENST00000509912 MPHOSPH9Q99550 1183 aa7.03□□□□□ -1.28
NEK1-204ENST00000509912 POLIQ9UNA4 740 aa7.03□□□□□ -1.28
NEK1-204ENST00000509912 C1QTNF2Q9BXJ5 285 aa7.02□□□□□ -1.28
NEK1-204ENST00000509912 MRS2Q9HD23 443 aa7.02□□□□□ -1.28
NEK1-204ENST00000509912 AATKQ6ZMQ8 1374 aa7.02□□□□□ -1.29
NEK1-204ENST00000509912 CAMTA1Q9Y6Y1 1673 aa7.02□□□□□ -1.29
NEK1-204ENST00000509912 NDUFB5O43674 189 aa7.02□□□□□ -1.29
NEK1-204ENST00000509912 INHAP05111 366 aa7.02□□□□□ -1.29
NEK1-204ENST00000509912 EHBP1Q8NDI1 1231 aa7.02□□□□□ -1.29
NEK1-204ENST00000509912 PEAK1Q9H792 1746 aa7.02□□□□□ -1.29
NEK1-204ENST00000509912 COL18A1P39060 1754 aa7.02□□□□□ -1.29
NEK1-204ENST00000509912 GLI3P10071 1580 aa7.02□□□□□ -1.29
NEK1-204ENST00000509912 PNMA6FA0A0J9YX94 578 aa7.02□□□□□ -1.29
NEK1-204ENST00000509912 CICQ96RK0 1608 aaPredicted RBP7.01□□□□□ -1.29
NEK1-204ENST00000509912 GRM5P41594 1212 aa7.01□□□□□ -1.29
NEK1-204ENST00000509912 ZNF662Q6ZS27 426 aa7.01□□□□□ -1.29
NEK1-204ENST00000509912 METTL16Q86W50 562 aaKnown RBP7.01□□□□□ -1.29
NEK1-204ENST00000509912 PIK3R5Q8WYR1 880 aa7.01□□□□□ -1.29
NEK1-204ENST00000509912 TANGO6Q9C0B7 1094 aa7.01□□□□□ -1.29
NEK1-204ENST00000509912 ZNF232Q9UNY5 417 aa7.01□□□□□ -1.29
NEK1-204ENST00000509912 USP31Q70CQ4 1352 aa7.01□□□□□ -1.29
NEK1-204ENST00000509912 RNF223E7ERA6 249 aa7.01□□□□□ -1.29
NEK1-204ENST00000509912 CDK11BP21127 795 aaKnown RBP7.01□□□□□ -1.29
NEK1-204ENST00000509912 GTF2F1P35269 517 aaKnown RBP eCLIP7.01□□□□□ -1.29
NEK1-204ENST00000509912 ERVK-9P63128 1117 aa7.01□□□□□ -1.29
NEK1-204ENST00000509912 CBLBQ13191 982 aa7.01□□□□□ -1.29
NEK1-204ENST00000509912 C8orf34Q49A92 452 aa7.01□□□□□ -1.29
NEK1-204ENST00000509912 PRKD2Q9BZL6 878 aa7.01□□□□□ -1.29
NEK1-204ENST00000509912 CAPN10Q9HC96 672 aa7.01□□□□□ -1.29
NEK1-204ENST00000509912 EMILIN1Q9Y6C2 1016 aa7.01□□□□□ -1.29
NEK1-204ENST00000509912 SPATA31A3Q5VYP0 1347 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms