RNA–Protein interactions for RNA: ENST00000509818.5

SEC24D-209, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-209ENST00000509818 LDHAL6AQ6ZMR3 332 aa10.91□□□□□ -0.66
SEC24D-209ENST00000509818 CCDC85AQ96PX6 553 aaPredicted RBP10.91□□□□□ -0.66
SEC24D-209ENST00000509818 GREM2Q9H772 168 aa10.91□□□□□ -0.66
SEC24D-209ENST00000509818 CWC22Q9HCG8 908 aaKnown RBP10.91□□□□□ -0.66
SEC24D-209ENST00000509818 RIPOR2Q9Y4F9 1068 aa10.91□□□□□ -0.66
SEC24D-209ENST00000509818 CCDC171Q6TFL3 1326 aa10.91□□□□□ -0.66
SEC24D-209ENST00000509818 CCDC158Q5M9N0 1113 aa10.91□□□□□ -0.66
SEC24D-209ENST00000509818 LINC00116Q8NCU8 138 aa10.91□□□□□ -0.66
SEC24D-209ENST00000509818 KCNB2Q92953 911 aa10.91□□□□□ -0.66
SEC24D-209ENST00000509818 FAM227BQ96M60 508 aa10.91□□□□□ -0.66
SEC24D-209ENST00000509818 DNAJC2Q99543 621 aaKnown RBP10.91□□□□□ -0.66
SEC24D-209ENST00000509818 SNX14Q9Y5W7 946 aa10.91□□□□□ -0.66
SEC24D-209ENST00000509818 COL5A3P25940 1745 aaPredicted RBP10.91□□□□□ -0.66
SEC24D-209ENST00000509818 IFIT1P09914 478 aaKnown RBP10.9□□□□□ -0.66
SEC24D-209ENST00000509818 PTH1RQ03431 593 aa10.9□□□□□ -0.66
SEC24D-209ENST00000509818 METTL24Q5JXM2 366 aa10.9□□□□□ -0.66
SEC24D-209ENST00000509818 GORABQ5T7V8 394 aa10.9□□□□□ -0.66
SEC24D-209ENST00000509818 KBTBD3Q8NAB2 608 aa10.9□□□□□ -0.66
SEC24D-209ENST00000509818 MAP4K1Q92918 833 aa10.9□□□□□ -0.66
SEC24D-209ENST00000509818 CNNM1Q9NRU3 951 aa10.9□□□□□ -0.66
SEC24D-209ENST00000509818 FOXD4L1Q9NU39 408 aa10.9□□□□□ -0.66
SEC24D-209ENST00000509818 NIP7Q9Y221 180 aaKnown RBP eCLIP10.9□□□□□ -0.66
SEC24D-209ENST00000509818 ZKSCAN1P17029 563 aaPredicted RBP10.89□□□□□ -0.67
SEC24D-209ENST00000509818 KCNJ4P48050 445 aa10.89□□□□□ -0.67
SEC24D-209ENST00000509818 TTC39AQ5SRH9 613 aa10.89□□□□□ -0.67
SEC24D-209ENST00000509818 EDC3Q96F86 508 aaKnown RBP10.89□□□□□ -0.67
SEC24D-209ENST00000509818 XAGE2Q96GT9 111 aa10.89□□□□□ -0.67
SEC24D-209ENST00000509818 RTN4Q9NQC3 1192 aaKnown RBP10.89□□□□□ -0.67
SEC24D-209ENST00000509818 LRRC4BQ9NT99 713 aa10.89□□□□□ -0.67
SEC24D-209ENST00000509818 PAG1Q9NWQ8 432 aa10.89□□□□□ -0.67
SEC24D-209ENST00000509818 A0A0D9SFI3 127 aa10.89□□□□□ -0.67
SEC24D-209ENST00000509818 KCNQ4P56696 695 aa10.89□□□□□ -0.67
SEC24D-209ENST00000509818 RAB3GAP1Q15042 981 aa10.89□□□□□ -0.67
SEC24D-209ENST00000509818 NECTIN1Q15223 517 aa10.89□□□□□ -0.67
SEC24D-209ENST00000509818 ATP2B3Q16720 1220 aa10.89□□□□□ -0.67
SEC24D-209ENST00000509818 LRRFIP1Q32MZ4 808 aaKnown RBP10.89□□□□□ -0.67
SEC24D-209ENST00000509818 TM6SF1Q9BZW5 370 aa10.89□□□□□ -0.67
SEC24D-209ENST00000509818 MED23Q9ULK4 1368 aa10.88□□□□□ -0.67
SEC24D-209ENST00000509818 GOLIM4O00461 696 aa10.88□□□□□ -0.67
SEC24D-209ENST00000509818 RPS6KA4O75676 772 aa10.88□□□□□ -0.67
SEC24D-209ENST00000509818 NTSR2O95665 410 aa10.88□□□□□ -0.67
SEC24D-209ENST00000509818 HCLS1P14317 486 aaPredicted RBP10.88□□□□□ -0.67
SEC24D-209ENST00000509818 NUCB2P80303 420 aa10.88□□□□□ -0.67
SEC24D-209ENST00000509818 CCDC152Q4G0S7 254 aa10.88□□□□□ -0.67
SEC24D-209ENST00000509818 MCMDC2Q4G0Z9 681 aa10.88□□□□□ -0.67
SEC24D-209ENST00000509818 GLIPR1L2Q4G1C9 344 aa10.88□□□□□ -0.67
SEC24D-209ENST00000509818 RNF20Q5VTR2 975 aa10.88□□□□□ -0.67
SEC24D-209ENST00000509818 PRPF40BQ6NWY9 871 aaKnown RBP10.88□□□□□ -0.67
SEC24D-209ENST00000509818 DDX46Q7L014 1031 aaKnown RBP10.88□□□□□ -0.67
SEC24D-209ENST00000509818 RASEFQ8IZ41 740 aa10.88□□□□□ -0.67
SEC24D-209ENST00000509818 TMX3Q96JJ7 454 aa10.88□□□□□ -0.67
SEC24D-209ENST00000509818 HELLSQ9NRZ9 838 aa10.88□□□□□ -0.67
SEC24D-209ENST00000509818 RBM8AQ9Y5S9 174 aaKnown RBP10.88□□□□□ -0.67
SEC24D-209ENST00000509818 CASZ1Q86V15 1759 aa10.88□□□□□ -0.67
SEC24D-209ENST00000509818 MROH5Q6ZUA9 1318 aa10.88□□□□□ -0.67
SEC24D-209ENST00000509818 UTRNP46939 3433 aa10.87□□□□□ -0.67
SEC24D-209ENST00000509818 SPEF2Q9C093 1822 aa10.87□□□□□ -0.67
SEC24D-209ENST00000509818 FAM177BA6PVY3 158 aa10.87□□□□□ -0.67
SEC24D-209ENST00000509818 MCM4P33991 863 aa10.87□□□□□ -0.67
SEC24D-209ENST00000509818 CREB3L3Q68CJ9 461 aa10.87□□□□□ -0.67
SEC24D-209ENST00000509818 UPF3BQ9BZI7 483 aaKnown RBP10.87□□□□□ -0.67
SEC24D-209ENST00000509818 CCNL1Q9UK58 526 aaPredicted RBP10.87□□□□□ -0.67
SEC24D-209ENST00000509818 RTL9Q8NET4 1388 aa10.87□□□□□ -0.67
SEC24D-209ENST00000509818 ABCC12Q96J65 1359 aa10.87□□□□□ -0.67
SEC24D-209ENST00000509818 BCORQ6W2J9 1755 aa10.87□□□□□ -0.67
SEC24D-209ENST00000509818 TAF5LO75529 589 aa10.87□□□□□ -0.67
SEC24D-209ENST00000509818 PDE8BO95263 885 aa10.87□□□□□ -0.67
SEC24D-209ENST00000509818 PSMA5P28066 241 aa10.87□□□□□ -0.67
SEC24D-209ENST00000509818 SSFA2P28290 1259 aa10.87□□□□□ -0.67
SEC24D-209ENST00000509818 ADORA1P30542 326 aa10.87□□□□□ -0.67
SEC24D-209ENST00000509818 CUL4AQ13619 759 aa10.87□□□□□ -0.67
SEC24D-209ENST00000509818 ZNF827Q17R98 1081 aa10.87□□□□□ -0.67
SEC24D-209ENST00000509818 INTS4Q96HW7 963 aaKnown RBP10.87□□□□□ -0.67
SEC24D-209ENST00000509818 ZNF512BQ96KM6 892 aaPredicted RBP10.87□□□□□ -0.67
SEC24D-209ENST00000509818 GBP4Q96PP9 640 aa10.87□□□□□ -0.67
SEC24D-209ENST00000509818 HMG20BQ9P0W2 317 aa10.87□□□□□ -0.67
SEC24D-209ENST00000509818 NDUFB9Q9Y6M9 179 aa10.87□□□□□ -0.67
SEC24D-209ENST00000509818 RIC1Q4ADV7 1423 aa10.86□□□□□ -0.67
SEC24D-209ENST00000509818 RNF113AO15541 343 aaKnown RBP10.86□□□□□ -0.67
SEC24D-209ENST00000509818 SLC15A2Q16348 729 aa10.86□□□□□ -0.67
SEC24D-209ENST00000509818 TSGA10IPQ3SY00 556 aa10.86□□□□□ -0.67
SEC24D-209ENST00000509818 VGLL2Q8N8G2 317 aa10.86□□□□□ -0.67
SEC24D-209ENST00000509818 TNPO1Q92973 898 aaKnown RBP10.86□□□□□ -0.67
SEC24D-209ENST00000509818 TTC14Q96N46 770 aa10.86□□□□□ -0.67
SEC24D-209ENST00000509818 MPHOSPH8Q99549 860 aa10.86□□□□□ -0.67
SEC24D-209ENST00000509818 ZSWIM6Q9HCJ5 1215 aa10.86□□□□□ -0.67
SEC24D-209ENST00000509818 NARFQ9UHQ1 456 aa10.86□□□□□ -0.67
SEC24D-209ENST00000509818 CYP46A1Q9Y6A2 500 aa10.86□□□□□ -0.67
SEC24D-209ENST00000509818 U3KPZ7 1027 aaPredicted RBP10.86□□□□□ -0.67
SEC24D-209ENST00000509818 DDX11L8A8MPP1 907 aa10.85□□□□□ -0.67
SEC24D-209ENST00000509818 SLC27A2O14975 620 aa10.85□□□□□ -0.67
SEC24D-209ENST00000509818 ZFYP08048 801 aaPredicted RBP10.85□□□□□ -0.67
SEC24D-209ENST00000509818 CASTP20810 708 aaKnown RBP10.85□□□□□ -0.67
SEC24D-209ENST00000509818 IGHMBP2P38935 993 aaKnown RBP10.85□□□□□ -0.67
SEC24D-209ENST00000509818 FKBP4Q02790 459 aaKnown RBP eCLIP10.85□□□□□ -0.67
SEC24D-209ENST00000509818 ZMYM1Q5SVZ6 1142 aa10.85□□□□□ -0.67
SEC24D-209ENST00000509818 VPS53Q5VIR6 699 aa10.85□□□□□ -0.67
SEC24D-209ENST00000509818 USPL1Q5W0Q7 1092 aa10.85□□□□□ -0.67
SEC24D-209ENST00000509818 ZNF589Q86UQ0 364 aaPredicted RBP10.85□□□□□ -0.67
SEC24D-209ENST00000509818 JAKMIP1Q96N16 626 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 283.1 ms