RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 HIRAP54198 1017 aaPredicted RBP19.74■□□□□ 0.75
TPM3-219ENST00000509409 CST9Q5W186 159 aa19.74■□□□□ 0.75
TPM3-219ENST00000509409 ANKRD18AQ8IVF6 992 aa19.74■□□□□ 0.75
TPM3-219ENST00000509409 TRPM4Q8TD43 1214 aa19.74■□□□□ 0.75
TPM3-219ENST00000509409 GLIS2Q9BZE0 524 aaPredicted RBP19.74■□□□□ 0.75
TPM3-219ENST00000509409 GGA1Q9UJY5 639 aa19.74■□□□□ 0.75
TPM3-219ENST00000509409 TAF1P21675 1872 aa19.73■□□□□ 0.75
TPM3-219ENST00000509409 SHTN1A0MZ66 631 aa19.73■□□□□ 0.75
TPM3-219ENST00000509409 UFL1O94874 794 aa19.73■□□□□ 0.75
TPM3-219ENST00000509409 CELF2O95319 508 aaKnown RBP19.73■□□□□ 0.75
TPM3-219ENST00000509409 CTCFP49711 727 aaPredicted RBP19.73■□□□□ 0.75
TPM3-219ENST00000509409 ZC3H15Q8WU90 426 aaKnown RBP19.73■□□□□ 0.75
TPM3-219ENST00000509409 DPF2Q92785 391 aa19.73■□□□□ 0.75
TPM3-219ENST00000509409 KCNQ5Q9NR82 932 aa19.73■□□□□ 0.75
TPM3-219ENST00000509409 IL16Q14005 1332 aa19.73■□□□□ 0.75
TPM3-219ENST00000509409 IGKV5-2P06315 115 aa19.72■□□□□ 0.75
TPM3-219ENST00000509409 ECE1P42892 770 aa19.72■□□□□ 0.75
TPM3-219ENST00000509409 RBM26Q5T8P6 1007 aaKnown RBP19.72■□□□□ 0.75
TPM3-219ENST00000509409 G2E3Q7L622 706 aa19.72■□□□□ 0.75
TPM3-219ENST00000509409 ZNF408Q9H9D4 720 aa19.72■□□□□ 0.75
TPM3-219ENST00000509409 WBP1LQ9NX94 342 aa19.72■□□□□ 0.75
TPM3-219ENST00000509409 PODXL2Q9NZ53 605 aa19.72■□□□□ 0.75
TPM3-219ENST00000509409 PGAP2Q9UHJ9 254 aa19.72■□□□□ 0.75
TPM3-219ENST00000509409 DDX60Q8IY21 1712 aaKnown RBP19.71■□□□□ 0.75
TPM3-219ENST00000509409 MAP2K1Q02750 393 aaPredicted RBP19.71■□□□□ 0.75
TPM3-219ENST00000509409 CYP4F22Q6NT55 531 aa19.71■□□□□ 0.75
TPM3-219ENST00000509409 CDC37L1Q7L3B6 337 aa19.71■□□□□ 0.75
TPM3-219ENST00000509409 SAMD7Q7Z3H4 446 aa19.71■□□□□ 0.75
TPM3-219ENST00000509409 CAPNS2Q96L46 248 aa19.71■□□□□ 0.75
TPM3-219ENST00000509409 CDC5LQ99459 802 aaKnown RBP19.71■□□□□ 0.75
TPM3-219ENST00000509409 RPS12P25398 132 aaKnown RBP19.7■□□□□ 0.74
TPM3-219ENST00000509409 CTSWP56202 376 aa19.7■□□□□ 0.74
TPM3-219ENST00000509409 CWF19L2Q2TBE0 894 aaKnown RBP19.7■□□□□ 0.74
TPM3-219ENST00000509409 TBC1D10BQ4KMP7 808 aaPredicted RBP19.7■□□□□ 0.74
TPM3-219ENST00000509409 NCBP3Q53F19 620 aaKnown RBP19.7■□□□□ 0.74
TPM3-219ENST00000509409 USP48Q86UV5 1035 aa19.7■□□□□ 0.74
TPM3-219ENST00000509409 TLL2Q9Y6L7 1015 aa19.7■□□□□ 0.74
TPM3-219ENST00000509409 NEURL1BA8MQ27 555 aa19.69■□□□□ 0.74
TPM3-219ENST00000509409 ATP2B4P23634 1241 aa19.69■□□□□ 0.74
TPM3-219ENST00000509409 FKBP5Q13451 457 aaPredicted RBP19.68■□□□□ 0.74
TPM3-219ENST00000509409 WDR63Q8IWG1 891 aa19.68■□□□□ 0.74
TPM3-219ENST00000509409 TTLL11Q8NHH1 800 aa19.68■□□□□ 0.74
TPM3-219ENST00000509409 BEGAINQ9BUH8 593 aa19.68■□□□□ 0.74
TPM3-219ENST00000509409 PRDM10Q9NQV6 1147 aa19.68■□□□□ 0.74
TPM3-219ENST00000509409 DUOX1Q9NRD9 1551 aa19.68■□□□□ 0.74
TPM3-219ENST00000509409 XDHP47989 1333 aa19.68■□□□□ 0.74
TPM3-219ENST00000509409 VIL1P09327 827 aaKnown RBP19.67■□□□□ 0.74
TPM3-219ENST00000509409 LBX1P52954 281 aa19.67■□□□□ 0.74
TPM3-219ENST00000509409 FLIIQ13045 1269 aa19.67■□□□□ 0.74
TPM3-219ENST00000509409 UBE3BQ7Z3V4 1068 aa19.67■□□□□ 0.74
TPM3-219ENST00000509409 FANCIQ9NVI1 1328 aa19.67■□□□□ 0.74
TPM3-219ENST00000509409 RTL9Q8NET4 1388 aa19.67■□□□□ 0.74
TPM3-219ENST00000509409 COL4A1P02462 1669 aa19.66■□□□□ 0.74
TPM3-219ENST00000509409 H7C1W4 665 aa19.66■□□□□ 0.74
TPM3-219ENST00000509409 SAPCD2Q86UD0 394 aa19.66■□□□□ 0.74
TPM3-219ENST00000509409 FAM9BQ8IZU0 186 aa19.66■□□□□ 0.74
TPM3-219ENST00000509409 DCPSQ96C86 337 aaKnown RBP19.66■□□□□ 0.74
TPM3-219ENST00000509409 GREM2Q9H772 168 aa19.66■□□□□ 0.74
TPM3-219ENST00000509409 BSDC1Q9NW68 430 aaPredicted RBP19.66■□□□□ 0.74
TPM3-219ENST00000509409 VAMP4O75379 141 aa19.65■□□□□ 0.74
TPM3-219ENST00000509409 EXOSC9Q06265 439 aaKnown RBP19.65■□□□□ 0.74
TPM3-219ENST00000509409 KRT26Q7Z3Y9 468 aa19.65■□□□□ 0.74
TPM3-219ENST00000509409 DNAAF4Q8WXU2 420 aa19.65■□□□□ 0.74
TPM3-219ENST00000509409 MYH16Q9H6N6 1097 aa19.65■□□□□ 0.74
TPM3-219ENST00000509409 MINPP1Q9UNW1 487 aa19.65■□□□□ 0.74
TPM3-219ENST00000509409 AOC2O75106 756 aa19.64■□□□□ 0.73
TPM3-219ENST00000509409 EGFRP00533 1210 aa19.64■□□□□ 0.73
TPM3-219ENST00000509409 IGHMBP2P38935 993 aaKnown RBP19.64■□□□□ 0.73
TPM3-219ENST00000509409 GCKRQ14397 625 aa19.64■□□□□ 0.73
TPM3-219ENST00000509409 KIF4BQ2VIQ3 1234 aa19.64■□□□□ 0.73
TPM3-219ENST00000509409 DLK2Q6UY11 383 aa19.64■□□□□ 0.73
TPM3-219ENST00000509409 LRRC37AA6NMS7 1700 aa19.64■□□□□ 0.73
TPM3-219ENST00000509409 RSBN1LQ6PCB5 846 aaPredicted RBP19.63■□□□□ 0.73
TPM3-219ENST00000509409 USP17L3A6NCW0 530 aa19.62■□□□□ 0.73
TPM3-219ENST00000509409 USP17L4A6NCW7 530 aa19.62■□□□□ 0.73
TPM3-219ENST00000509409 HSPA8P11142 646 aaKnown RBP19.62■□□□□ 0.73
TPM3-219ENST00000509409 MAP2K2P36507 400 aa19.62■□□□□ 0.73
TPM3-219ENST00000509409 USP17L1Q7RTZ2 530 aa19.62■□□□□ 0.73
TPM3-219ENST00000509409 PODNQ7Z5L7 613 aa19.62■□□□□ 0.73
TPM3-219ENST00000509409 AGBL3Q8NEM8 1001 aa19.62■□□□□ 0.73
TPM3-219ENST00000509409 MPHOSPH8Q99549 860 aa19.62■□□□□ 0.73
TPM3-219ENST00000509409 WTIPA6NIX2 430 aaPredicted RBP19.61■□□□□ 0.73
TPM3-219ENST00000509409 CCT4P50991 539 aaKnown RBP19.61■□□□□ 0.73
TPM3-219ENST00000509409 HUNKP57058 714 aa19.61■□□□□ 0.73
TPM3-219ENST00000509409 LINS1Q8NG48 757 aa19.61■□□□□ 0.73
TPM3-219ENST00000509409 FBXW7Q969H0 707 aa19.61■□□□□ 0.73
TPM3-219ENST00000509409 HHIPL1Q96JK4 782 aa19.61■□□□□ 0.73
TPM3-219ENST00000509409 ADM5C9JUS6 153 aa19.6■□□□□ 0.73
TPM3-219ENST00000509409 ITGA6P23229 1130 aa19.6■□□□□ 0.73
TPM3-219ENST00000509409 SULF1Q8IWU6 871 aa19.6■□□□□ 0.73
TPM3-219ENST00000509409 C2orf69Q8N8R5 385 aa19.6■□□□□ 0.73
TPM3-219ENST00000509409 PLA2G12BQ9BX93 195 aa19.6■□□□□ 0.73
TPM3-219ENST00000509409 USP17L8P0C7I0 530 aa19.59■□□□□ 0.73
TPM3-219ENST00000509409 SCARF1Q14162 830 aa19.59■□□□□ 0.73
TPM3-219ENST00000509409 GBA2Q9HCG7 927 aaPredicted RBP19.59■□□□□ 0.73
TPM3-219ENST00000509409 SPINK5Q9NQ38 1064 aaPredicted RBP19.59■□□□□ 0.73
TPM3-219ENST00000509409 GGA3Q9NZ52 723 aa19.59■□□□□ 0.73
TPM3-219ENST00000509409 LEMD3Q9Y2U8 911 aa19.59■□□□□ 0.73
TPM3-219ENST00000509409 F6X3S4 739 aa19.58■□□□□ 0.72
TPM3-219ENST00000509409 ZNF280AP59817 542 aaPredicted RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms