RNA–Protein interactions for RNA: ENST00000509234.1

TRAPPC13-210, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-210ENST00000509234 SPEM2Q0P670 501 aa7.31□□□□□ -1.24
TRAPPC13-210ENST00000509234 SV2AQ7L0J3 742 aa7.31□□□□□ -1.24
TRAPPC13-210ENST00000509234 GPR161Q8N6U8 529 aaKnown RBP7.31□□□□□ -1.24
TRAPPC13-210ENST00000509234 C1orf127Q8N9H9 656 aa7.31□□□□□ -1.24
TRAPPC13-210ENST00000509234 PHF24Q9UPV7 400 aa7.31□□□□□ -1.24
TRAPPC13-210ENST00000509234 TARBP1Q13395 1621 aaKnown RBP7.3□□□□□ -1.24
TRAPPC13-210ENST00000509234 GPR25O00155 361 aa7.3□□□□□ -1.24
TRAPPC13-210ENST00000509234 MMP20O60882 483 aa7.3□□□□□ -1.24
TRAPPC13-210ENST00000509234 SASH3O75995 380 aa7.3□□□□□ -1.24
TRAPPC13-210ENST00000509234 KIF4AO95239 1232 aa7.3□□□□□ -1.24
TRAPPC13-210ENST00000509234 NEFLP07196 543 aa7.3□□□□□ -1.24
TRAPPC13-210ENST00000509234 TARSP26639 723 aaKnown RBP7.3□□□□□ -1.24
TRAPPC13-210ENST00000509234 MAPK8P45983 427 aa7.3□□□□□ -1.24
TRAPPC13-210ENST00000509234 ZNF326Q5BKZ1 582 aaKnown RBP7.3□□□□□ -1.24
TRAPPC13-210ENST00000509234 USPL1Q5W0Q7 1092 aa7.3□□□□□ -1.24
TRAPPC13-210ENST00000509234 ALG1LQ6GMV1 187 aa7.3□□□□□ -1.24
TRAPPC13-210ENST00000509234 RNF19AQ9NV58 838 aa7.3□□□□□ -1.24
TRAPPC13-210ENST00000509234 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.3□□□□□ -1.24
TRAPPC13-210ENST00000509234 RBM25P49756 843 aaKnown RBP7.29□□□□□ -1.24
TRAPPC13-210ENST00000509234 DAB2P98082 770 aa7.29□□□□□ -1.24
TRAPPC13-210ENST00000509234 FGD1P98174 961 aa7.29□□□□□ -1.24
TRAPPC13-210ENST00000509234 LDLRAD1Q5T700 205 aa7.29□□□□□ -1.24
TRAPPC13-210ENST00000509234 TMC4Q7Z404 712 aa7.29□□□□□ -1.24
TRAPPC13-210ENST00000509234 GALNT12Q8IXK2 581 aa7.29□□□□□ -1.24
TRAPPC13-210ENST00000509234 AVENQ9NQS1 362 aaPredicted RBP7.29□□□□□ -1.24
TRAPPC13-210ENST00000509234 TLR7Q9NYK1 1049 aaKnown RBP7.29□□□□□ -1.24
TRAPPC13-210ENST00000509234 SALL4Q9UJQ4 1053 aa7.29□□□□□ -1.24
TRAPPC13-210ENST00000509234 CDC14CA4D256 554 aa7.28□□□□□ -1.24
TRAPPC13-210ENST00000509234 EREGO14944 169 aa7.28□□□□□ -1.24
TRAPPC13-210ENST00000509234 PHACTR2O75167 634 aa7.28□□□□□ -1.24
TRAPPC13-210ENST00000509234 CYP2E1P05181 493 aaPredicted RBP7.28□□□□□ -1.24
TRAPPC13-210ENST00000509234 NFKB1P19838 968 aa7.28□□□□□ -1.24
TRAPPC13-210ENST00000509234 ZNF468Q5VIY5 522 aaPredicted RBP7.28□□□□□ -1.24
TRAPPC13-210ENST00000509234 CCDC74AQ96AQ1 378 aa7.28□□□□□ -1.24
TRAPPC13-210ENST00000509234 MRRFQ96E11 262 aaKnown RBP7.28□□□□□ -1.24
TRAPPC13-210ENST00000509234 TRERF1Q96PN7 1200 aa7.28□□□□□ -1.24
TRAPPC13-210ENST00000509234 DUSP9Q99956 384 aaKnown RBP7.28□□□□□ -1.24
TRAPPC13-210ENST00000509234 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.28□□□□□ -1.24
TRAPPC13-210ENST00000509234 RECKO95980 971 aa7.27□□□□□ -1.25
TRAPPC13-210ENST00000509234 RARAP10276 462 aa7.27□□□□□ -1.25
TRAPPC13-210ENST00000509234 PEAR1Q5VY43 1037 aaPredicted RBP7.27□□□□□ -1.25
TRAPPC13-210ENST00000509234 TTC16Q8NEE8 873 aa7.27□□□□□ -1.25
TRAPPC13-210ENST00000509234 PARP2Q9UGN5 583 aa7.27□□□□□ -1.25
TRAPPC13-210ENST00000509234 KLF15Q9UIH9 416 aa7.27□□□□□ -1.25
TRAPPC13-210ENST00000509234 POLA1P09884 1462 aaPredicted RBP7.27□□□□□ -1.25
TRAPPC13-210ENST00000509234 EIF4G3O43432 1585 aaKnown RBP7.27□□□□□ -1.25
TRAPPC13-210ENST00000509234 SIN3BO75182 1162 aa7.26□□□□□ -1.25
TRAPPC13-210ENST00000509234 GNA15P30679 374 aa7.26□□□□□ -1.25
TRAPPC13-210ENST00000509234 IRS1P35568 1242 aa7.26□□□□□ -1.25
TRAPPC13-210ENST00000509234 NRLP54845 237 aa7.26□□□□□ -1.25
TRAPPC13-210ENST00000509234 COL13A1Q5TAT6 717 aaPredicted RBP7.26□□□□□ -1.25
TRAPPC13-210ENST00000509234 FOXR1Q6PIV2 292 aa7.26□□□□□ -1.25
TRAPPC13-210ENST00000509234 RAB44Q7Z6P3 723 aaPredicted RBP7.26□□□□□ -1.25
TRAPPC13-210ENST00000509234 TRPM4Q8TD43 1214 aa7.26□□□□□ -1.25
TRAPPC13-210ENST00000509234 TNFRSF25Q93038 417 aa7.26□□□□□ -1.25
TRAPPC13-210ENST00000509234 PMEPA1Q969W9 287 aa7.26□□□□□ -1.25
TRAPPC13-210ENST00000509234 FRMD6Q96NE9 622 aa7.26□□□□□ -1.25
TRAPPC13-210ENST00000509234 AQRO60306 1485 aaKnown RBP eCLIP7.25□□□□□ -1.25
TRAPPC13-210ENST00000509234 ZBTB42B2RXF5 422 aa7.25□□□□□ -1.25
TRAPPC13-210ENST00000509234 GPLD1P80108 840 aa7.25□□□□□ -1.25
TRAPPC13-210ENST00000509234 KRT76Q01546 638 aa7.25□□□□□ -1.25
TRAPPC13-210ENST00000509234 ATP2B2Q01814 1243 aa7.25□□□□□ -1.25
TRAPPC13-210ENST00000509234 RNFT1Q5M7Z0 435 aa7.25□□□□□ -1.25
TRAPPC13-210ENST00000509234 KIAA0319Q5VV43 1072 aa7.25□□□□□ -1.25
TRAPPC13-210ENST00000509234 DHX32Q7L7V1 743 aaKnown RBP7.25□□□□□ -1.25
TRAPPC13-210ENST00000509234 KRT25Q7Z3Z0 450 aa7.25□□□□□ -1.25
TRAPPC13-210ENST00000509234 BHMTQ93088 406 aa7.25□□□□□ -1.25
TRAPPC13-210ENST00000509234 CNTNAP3BQ96NU0 1288 aa7.25□□□□□ -1.25
TRAPPC13-210ENST00000509234 KRTAP4-8Q9BYQ9 185 aa7.25□□□□□ -1.25
TRAPPC13-210ENST00000509234 CNTNAP3Q9BZ76 1288 aa7.25□□□□□ -1.25
TRAPPC13-210ENST00000509234 NPHS2Q9NP85 383 aa7.25□□□□□ -1.25
TRAPPC13-210ENST00000509234 MBIPQ9NS73 344 aa7.25□□□□□ -1.25
TRAPPC13-210ENST00000509234 WDR97A6NE52 1622 aa7.24□□□□□ -1.25
TRAPPC13-210ENST00000509234 CUX1P39880 1505 aa7.24□□□□□ -1.25
TRAPPC13-210ENST00000509234 E9PSI1 815 aa7.24□□□□□ -1.25
TRAPPC13-210ENST00000509234 ARAFP10398 606 aa7.24□□□□□ -1.25
TRAPPC13-210ENST00000509234 TTC39BQ5VTQ0 682 aaPredicted RBP7.24□□□□□ -1.25
TRAPPC13-210ENST00000509234 PI16Q6UXB8 463 aa7.24□□□□□ -1.25
TRAPPC13-210ENST00000509234 GLIS3Q8NEA6 775 aa7.24□□□□□ -1.25
TRAPPC13-210ENST00000509234 SOGA1O94964 1423 aa7.24□□□□□ -1.25
TRAPPC13-210ENST00000509234 CHD1O14646 1710 aa7.24□□□□□ -1.25
TRAPPC13-210ENST00000509234 RAD54L2Q9Y4B4 1467 aa7.24□□□□□ -1.25
TRAPPC13-210ENST00000509234 RIMBP3CA6NJZ7 1639 aa7.23□□□□□ -1.25
TRAPPC13-210ENST00000509234 RIMBP3BA6NNM3 1639 aa7.23□□□□□ -1.25
TRAPPC13-210ENST00000509234 RIMBP3Q9UFD9 1639 aa7.23□□□□□ -1.25
TRAPPC13-210ENST00000509234 ADARB2-AS1A8MUL3 147 aa7.23□□□□□ -1.25
TRAPPC13-210ENST00000509234 NFKBIEO00221 500 aa7.23□□□□□ -1.25
TRAPPC13-210ENST00000509234 POLR3DP05423 398 aaPredicted RBP7.23□□□□□ -1.25
TRAPPC13-210ENST00000509234 MX2P20592 715 aa7.23□□□□□ -1.25
TRAPPC13-210ENST00000509234 CES1P23141 567 aa7.23□□□□□ -1.25
TRAPPC13-210ENST00000509234 PLAURQ03405 335 aa7.23□□□□□ -1.25
TRAPPC13-210ENST00000509234 SYT9Q86SS6 491 aa7.23□□□□□ -1.25
TRAPPC13-210ENST00000509234 CEP120Q8N960 986 aa7.23□□□□□ -1.25
TRAPPC13-210ENST00000509234 EPS8L3Q8TE67 593 aaKnown RBP7.23□□□□□ -1.25
TRAPPC13-210ENST00000509234 OSBPL7Q9BZF2 842 aa7.23□□□□□ -1.25
TRAPPC13-210ENST00000509234 KANSL3Q9P2N6 904 aa7.23□□□□□ -1.25
TRAPPC13-210ENST00000509234 AK5Q9Y6K8 562 aa7.23□□□□□ -1.25
TRAPPC13-210ENST00000509234 GIPC1O14908 333 aa7.22□□□□□ -1.25
TRAPPC13-210ENST00000509234 PSAPP07602 524 aa7.22□□□□□ -1.25
TRAPPC13-210ENST00000509234 CTSHP09668 335 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms