RNA–Protein interactions for RNA: ENST00000509053.5

SSBP2-212, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene SSBP2, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-212ENST00000509053 UBN2Q6ZU65 1347 aa10.35□□□□□ -0.75
SSBP2-212ENST00000509053 ZPR1O75312 459 aa10.34□□□□□ -0.75
SSBP2-212ENST00000509053 TCIRG1Q13488 830 aa10.34□□□□□ -0.75
SSBP2-212ENST00000509053 PDE3AQ14432 1141 aa10.34□□□□□ -0.75
SSBP2-212ENST00000509053 R3HDM1Q15032 1099 aaKnown RBP10.34□□□□□ -0.75
SSBP2-212ENST00000509053 INTS3Q68E01 1043 aaKnown RBP10.34□□□□□ -0.75
SSBP2-212ENST00000509053 JARID2Q92833 1246 aaPredicted RBP10.34□□□□□ -0.75
SSBP2-212ENST00000509053 FBXW7Q969H0 707 aa10.34□□□□□ -0.75
SSBP2-212ENST00000509053 ISCA1Q9BUE6 129 aa10.34□□□□□ -0.75
SSBP2-212ENST00000509053 NEURL1BA8MQ27 555 aa10.33□□□□□ -0.76
SSBP2-212ENST00000509053 ITPRIPQ8IWB1 547 aa10.33□□□□□ -0.76
SSBP2-212ENST00000509053 ZNF34Q8IZ26 560 aa10.33□□□□□ -0.76
SSBP2-212ENST00000509053 EXOC6Q8TAG9 804 aa10.33□□□□□ -0.76
SSBP2-212ENST00000509053 PSDA5PKW4 1024 aaPredicted RBP10.33□□□□□ -0.76
SSBP2-212ENST00000509053 HMGB2P26583 209 aaKnown RBP10.33□□□□□ -0.76
SSBP2-212ENST00000509053 MVPQ14764 893 aaKnown RBP10.33□□□□□ -0.76
SSBP2-212ENST00000509053 MSL1Q68DK7 614 aa10.33□□□□□ -0.76
SSBP2-212ENST00000509053 BICDL1Q6ZP65 573 aa10.33□□□□□ -0.76
SSBP2-212ENST00000509053 NLRP10Q86W26 655 aa10.33□□□□□ -0.76
SSBP2-212ENST00000509053 SYNE4Q8N205 404 aa10.33□□□□□ -0.76
SSBP2-212ENST00000509053 RETREG2Q8NC44 543 aa10.33□□□□□ -0.76
SSBP2-212ENST00000509053 LINS1Q8NG48 757 aa10.33□□□□□ -0.76
SSBP2-212ENST00000509053 SRCIN1Q9C0H9 1055 aa10.33□□□□□ -0.76
SSBP2-212ENST00000509053 DDX60Q8IY21 1712 aaKnown RBP10.32□□□□□ -0.76
SSBP2-212ENST00000509053 FAM177BA6PVY3 158 aa10.32□□□□□ -0.76
SSBP2-212ENST00000509053 PTGER2P43116 358 aa10.32□□□□□ -0.76
SSBP2-212ENST00000509053 CCT4P50991 539 aaKnown RBP10.32□□□□□ -0.76
SSBP2-212ENST00000509053 IRF5Q13568 498 aa10.32□□□□□ -0.76
SSBP2-212ENST00000509053 NFIXQ14938 502 aa10.32□□□□□ -0.76
SSBP2-212ENST00000509053 SUSD4Q5VX71 490 aa10.32□□□□□ -0.76
SSBP2-212ENST00000509053 CLEC4GQ6UXB4 293 aa10.32□□□□□ -0.76
SSBP2-212ENST00000509053 FLAD1Q8NFF5 587 aa10.32□□□□□ -0.76
SSBP2-212ENST00000509053 RNF25Q96BH1 459 aaPredicted RBP10.32□□□□□ -0.76
SSBP2-212ENST00000509053 MEIS3Q99687 375 aa10.32□□□□□ -0.76
SSBP2-212ENST00000509053 USP44Q9H0E7 712 aa10.32□□□□□ -0.76
SSBP2-212ENST00000509053 NIP7Q9Y221 180 aaKnown RBP eCLIP10.32□□□□□ -0.76
SSBP2-212ENST00000509053 ZBTB7BO15156 539 aaPredicted RBP10.31□□□□□ -0.76
SSBP2-212ENST00000509053 NBPF7P0C2Y1 421 aaPredicted RBP10.31□□□□□ -0.76
SSBP2-212ENST00000509053 TM4SF1P30408 202 aa10.31□□□□□ -0.76
SSBP2-212ENST00000509053 NEXNQ0ZGT2 675 aa10.31□□□□□ -0.76
SSBP2-212ENST00000509053 GCKRQ14397 625 aa10.31□□□□□ -0.76
SSBP2-212ENST00000509053 EFCAB3Q8N7B9 438 aa10.31□□□□□ -0.76
SSBP2-212ENST00000509053 ZNF652Q9Y2D9 606 aa10.31□□□□□ -0.76
SSBP2-212ENST00000509053 NOP58Q9Y2X3 529 aaKnown RBP10.31□□□□□ -0.76
SSBP2-212ENST00000509053 NRXN2Q9P2S2 1712 aa10.31□□□□□ -0.76
SSBP2-212ENST00000509053 ALDH1L1O75891 902 aa10.3□□□□□ -0.76
SSBP2-212ENST00000509053 NTSR2O95665 410 aa10.3□□□□□ -0.76
SSBP2-212ENST00000509053 MS4A1P11836 297 aa10.3□□□□□ -0.76
SSBP2-212ENST00000509053 CASP7P55210 303 aa10.3□□□□□ -0.76
SSBP2-212ENST00000509053 DDR1Q08345 913 aa10.3□□□□□ -0.76
SSBP2-212ENST00000509053 TRIM28Q13263 835 aaKnown RBP10.3□□□□□ -0.76
SSBP2-212ENST00000509053 HSP90AB3PQ58FF7 597 aa10.3□□□□□ -0.76
SSBP2-212ENST00000509053 TICAM2Q86XR7 235 aa10.3□□□□□ -0.76
SSBP2-212ENST00000509053 MICALL2Q8IY33 904 aa10.3□□□□□ -0.76
SSBP2-212ENST00000509053 CCDC191Q8NCU4 936 aa10.3□□□□□ -0.76
SSBP2-212ENST00000509053 ANP32BQ92688 251 aaKnown RBP10.3□□□□□ -0.76
SSBP2-212ENST00000509053 CWC25Q9NXE8 425 aaPredicted RBP10.3□□□□□ -0.76
SSBP2-212ENST00000509053 LAMB2P55268 1798 aa10.3□□□□□ -0.76
SSBP2-212ENST00000509053 TNRC6CQ9HCJ0 1690 aaKnown RBP10.3□□□□□ -0.76
SSBP2-212ENST00000509053 NUTM1Q86Y26 1132 aa10.29□□□□□ -0.76
SSBP2-212ENST00000509053 CERS3Q8IU89 383 aa10.29□□□□□ -0.76
SSBP2-212ENST00000509053 CCDC24Q8N4L8 307 aa10.29□□□□□ -0.76
SSBP2-212ENST00000509053 FAM89AQ96GI7 184 aa10.29□□□□□ -0.76
SSBP2-212ENST00000509053 KAZALD1Q96I82 304 aa10.29□□□□□ -0.76
SSBP2-212ENST00000509053 UTYO14607 1347 aa10.29□□□□□ -0.76
SSBP2-212ENST00000509053 MYH3P11055 1940 aa10.29□□□□□ -0.76
SSBP2-212ENST00000509053 ANKRD31Q8N7Z5 1873 aa10.28□□□□□ -0.76
SSBP2-212ENST00000509053 TESPA1A2RU30 521 aaPredicted RBP10.28□□□□□ -0.76
SSBP2-212ENST00000509053 H7C1W4 665 aa10.28□□□□□ -0.76
SSBP2-212ENST00000509053 GRM8O00222 908 aa10.28□□□□□ -0.76
SSBP2-212ENST00000509053 POLRMTO00411 1230 aaKnown RBP10.28□□□□□ -0.76
SSBP2-212ENST00000509053 ZBTB7AO95365 584 aa10.28□□□□□ -0.76
SSBP2-212ENST00000509053 CC2D2BQ6DHV5 1058 aa10.28□□□□□ -0.76
SSBP2-212ENST00000509053 UBE3BQ7Z3V4 1068 aa10.28□□□□□ -0.76
SSBP2-212ENST00000509053 ZNF592Q92610 1267 aa10.28□□□□□ -0.76
SSBP2-212ENST00000509053 SUCLG2Q96I99 432 aa10.28□□□□□ -0.76
SSBP2-212ENST00000509053 SETDB2Q96T68 719 aa10.28□□□□□ -0.76
SSBP2-212ENST00000509053 ZBTB40Q9NUA8 1239 aa10.28□□□□□ -0.76
SSBP2-212ENST00000509053 DDX19BQ9UMR2 479 aa10.28□□□□□ -0.76
SSBP2-212ENST00000509053 ABCC12Q96J65 1359 aa10.28□□□□□ -0.76
SSBP2-212ENST00000509053 IBTKQ9P2D0 1353 aaPredicted RBP10.28□□□□□ -0.76
SSBP2-212ENST00000509053 ERFEQ4G0M1 354 aa10.28□□□□□ -0.76
SSBP2-212ENST00000509053 PARP10Q53GL7 1025 aa10.28□□□□□ -0.76
SSBP2-212ENST00000509053 EPHA10Q5JZY3 1008 aa10.28□□□□□ -0.76
SSBP2-212ENST00000509053 NLGN1Q8N2Q7 840 aa10.28□□□□□ -0.76
SSBP2-212ENST00000509053 ZBTB38Q8NAP3 1195 aaPredicted RBP10.28□□□□□ -0.76
SSBP2-212ENST00000509053 PSMD1Q99460 953 aa10.28□□□□□ -0.76
SSBP2-212ENST00000509053 C9orf78Q9NZ63 289 aaPredicted RBP10.28□□□□□ -0.76
SSBP2-212ENST00000509053 TRMT112Q9UI30 125 aaKnown RBP10.28□□□□□ -0.76
SSBP2-212ENST00000509053 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.28□□□□□ -0.76
SSBP2-212ENST00000509053 CARMIL3Q8ND23 1372 aa10.27□□□□□ -0.77
SSBP2-212ENST00000509053 COL4A1P02462 1669 aa10.27□□□□□ -0.77
SSBP2-212ENST00000509053 TAF1P21675 1872 aa10.27□□□□□ -0.77
SSBP2-212ENST00000509053 SERPINB2P05120 415 aa10.27□□□□□ -0.77
SSBP2-212ENST00000509053 PCCAP05165 728 aaPredicted RBP10.27□□□□□ -0.77
SSBP2-212ENST00000509053 MMP10P09238 476 aa10.27□□□□□ -0.77
SSBP2-212ENST00000509053 UTP14AQ9BVJ6 771 aaKnown RBP10.27□□□□□ -0.77
SSBP2-212ENST00000509053 LRRFIP2Q9Y608 721 aaKnown RBP10.27□□□□□ -0.77
SSBP2-212ENST00000509053 UBTFL1P0CB47 393 aaPredicted RBP10.26□□□□□ -0.77
SSBP2-212ENST00000509053 HCLS1P14317 486 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms