RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 MROH5Q6ZUA9 1318 aa11.06□□□□□ -0.64
HTT-205ENST00000509043 LRP5O75197 1615 aa11.06□□□□□ -0.64
HTT-205ENST00000509043 UBAP1LF5GYI3 381 aa11.05□□□□□ -0.64
HTT-205ENST00000509043 ITGA6P23229 1130 aa11.05□□□□□ -0.64
HTT-205ENST00000509043 CRKLP46109 303 aaKnown RBP11.05□□□□□ -0.64
HTT-205ENST00000509043 PIP4K2BP78356 416 aa11.05□□□□□ -0.64
HTT-205ENST00000509043 KLHL40Q2TBA0 621 aa11.05□□□□□ -0.64
HTT-205ENST00000509043 ZMYM1Q5SVZ6 1142 aa11.05□□□□□ -0.64
HTT-205ENST00000509043 ZSCAN25Q6NSZ9 544 aa11.05□□□□□ -0.64
HTT-205ENST00000509043 BLOC1S2Q6QNY1 142 aa11.05□□□□□ -0.64
HTT-205ENST00000509043 KLHL34Q8N239 644 aa11.05□□□□□ -0.64
HTT-205ENST00000509043 ZGPATQ8N5A5 531 aaKnown RBP11.05□□□□□ -0.64
HTT-205ENST00000509043 ARXQ96QS3 562 aa11.05□□□□□ -0.64
HTT-205ENST00000509043 DNAJC2Q99543 621 aaKnown RBP11.05□□□□□ -0.64
HTT-205ENST00000509043 UTP14AQ9BVJ6 771 aaKnown RBP11.05□□□□□ -0.64
HTT-205ENST00000509043 RIPOR2Q9Y4F9 1068 aa11.05□□□□□ -0.64
HTT-205ENST00000509043 ATP6V1DQ9Y5K8 247 aa11.05□□□□□ -0.64
HTT-205ENST00000509043 NUP98P52948 1817 aa11.05□□□□□ -0.64
HTT-205ENST00000509043 RNF113AO15541 343 aaKnown RBP11.04□□□□□ -0.64
HTT-205ENST00000509043 UQCRFS1P1P0C7P4 283 aa11.04□□□□□ -0.64
HTT-205ENST00000509043 TIMM10P62072 90 aa11.04□□□□□ -0.64
HTT-205ENST00000509043 TTF1Q15361 905 aaPredicted RBP11.04□□□□□ -0.64
HTT-205ENST00000509043 ATP2B3Q16720 1220 aa11.04□□□□□ -0.64
HTT-205ENST00000509043 METTL24Q5JXM2 366 aa11.04□□□□□ -0.64
HTT-205ENST00000509043 TTC39AQ5SRH9 613 aa11.04□□□□□ -0.64
HTT-205ENST00000509043 LDHAL6AQ6ZMR3 332 aa11.04□□□□□ -0.64
HTT-205ENST00000509043 ZNF594Q96JF6 807 aaPredicted RBP11.04□□□□□ -0.64
HTT-205ENST00000509043 BCL9LQ86UU0 1499 aa11.04□□□□□ -0.64
HTT-205ENST00000509043 CNTNAP4Q9C0A0 1308 aa11.04□□□□□ -0.64
HTT-205ENST00000509043 MYH3P11055 1940 aa11.03□□□□□ -0.64
HTT-205ENST00000509043 RIC1Q4ADV7 1423 aa11.03□□□□□ -0.64
HTT-205ENST00000509043 GOLGA6L3A6NEY3 463 aa11.03□□□□□ -0.64
HTT-205ENST00000509043 GOLIM4O00461 696 aa11.03□□□□□ -0.64
HTT-205ENST00000509043 CAMTA2O94983 1202 aa11.03□□□□□ -0.64
HTT-205ENST00000509043 PDE8BO95263 885 aa11.03□□□□□ -0.64
HTT-205ENST00000509043 MBD3O95983 291 aa11.03□□□□□ -0.64
HTT-205ENST00000509043 PDCP20941 246 aa11.03□□□□□ -0.64
HTT-205ENST00000509043 RPS6KB1P23443 525 aa11.03□□□□□ -0.64
HTT-205ENST00000509043 GPTP24298 496 aa11.03□□□□□ -0.64
HTT-205ENST00000509043 RC3H1Q5TC82 1133 aaKnown RBP11.03□□□□□ -0.64
HTT-205ENST00000509043 DDX46Q7L014 1031 aaKnown RBP11.03□□□□□ -0.64
HTT-205ENST00000509043 XAGE2Q96GT9 111 aa11.03□□□□□ -0.64
HTT-205ENST00000509043 NGLY1Q96IV0 654 aa11.03□□□□□ -0.64
HTT-205ENST00000509043 PUS3Q9BZE2 481 aaKnown RBP11.03□□□□□ -0.64
HTT-205ENST00000509043 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.03□□□□□ -0.64
HTT-205ENST00000509043 CNNM1Q9NRU3 951 aa11.03□□□□□ -0.64
HTT-205ENST00000509043 CTNNA3Q9UI47 895 aa11.03□□□□□ -0.64
HTT-205ENST00000509043 SMC3Q9UQE7 1217 aa11.03□□□□□ -0.64
HTT-205ENST00000509043 COL5A3P25940 1745 aaPredicted RBP11.02□□□□□ -0.65
HTT-205ENST00000509043 FSD2A1L4K1 749 aa11.02□□□□□ -0.65
HTT-205ENST00000509043 HMGB2P26583 209 aaKnown RBP11.02□□□□□ -0.65
HTT-205ENST00000509043 PUM3Q15397 648 aaKnown RBP11.02□□□□□ -0.65
HTT-205ENST00000509043 CCDC152Q4G0S7 254 aa11.02□□□□□ -0.65
HTT-205ENST00000509043 ZNF589Q86UQ0 364 aaPredicted RBP11.02□□□□□ -0.65
HTT-205ENST00000509043 VGLL2Q8N8G2 317 aa11.02□□□□□ -0.65
HTT-205ENST00000509043 GREM2Q9H772 168 aa11.02□□□□□ -0.65
HTT-205ENST00000509043 TBC1D2BQ9UPU7 963 aa11.02□□□□□ -0.65
HTT-205ENST00000509043 ZDHHC9Q9Y397 364 aa11.02□□□□□ -0.65
HTT-205ENST00000509043 LAMB2P55268 1798 aa11.02□□□□□ -0.65
HTT-205ENST00000509043 UBN2Q6ZU65 1347 aa11.02□□□□□ -0.65
HTT-205ENST00000509043 ITPK1Q13572 414 aa11.01□□□□□ -0.65
HTT-205ENST00000509043 CSPP1Q1MSJ5 1256 aa11.01□□□□□ -0.65
HTT-205ENST00000509043 ADCK5Q3MIX3 580 aa11.01□□□□□ -0.65
HTT-205ENST00000509043 LPIN2Q92539 896 aa11.01□□□□□ -0.65
HTT-205ENST00000509043 ACSBG1Q96GR2 724 aa11.01□□□□□ -0.65
HTT-205ENST00000509043 NEK1Q96PY6 1258 aa11.01□□□□□ -0.65
HTT-205ENST00000509043 THSD7AQ9UPZ6 1657 aa11.01□□□□□ -0.65
HTT-205ENST00000509043 BCORQ6W2J9 1755 aa11□□□□□ -0.65
HTT-205ENST00000509043 SLC5A1P13866 664 aa11□□□□□ -0.65
HTT-205ENST00000509043 ARID4AP29374 1257 aaPredicted RBP11□□□□□ -0.65
HTT-205ENST00000509043 MRE11P49959 708 aa11□□□□□ -0.65
HTT-205ENST00000509043 FAM98CQ17RN3 349 aaKnown RBP11□□□□□ -0.65
HTT-205ENST00000509043 SUSD4Q5VX71 490 aa11□□□□□ -0.65
HTT-205ENST00000509043 MCTP1Q6DN14 999 aa11□□□□□ -0.65
HTT-205ENST00000509043 FBXL16Q8N461 479 aa11□□□□□ -0.65
HTT-205ENST00000509043 APPBP2Q92624 585 aa11□□□□□ -0.65
HTT-205ENST00000509043 EDC3Q96F86 508 aaKnown RBP11□□□□□ -0.65
HTT-205ENST00000509043 C8orf37Q96NL8 207 aa11□□□□□ -0.65
HTT-205ENST00000509043 CDC5LQ99459 802 aaKnown RBP11□□□□□ -0.65
HTT-205ENST00000509043 LMBRD1Q9NUN5 540 aa11□□□□□ -0.65
HTT-205ENST00000509043 DDX49Q9Y6V7 483 aaKnown RBP11□□□□□ -0.65
HTT-205ENST00000509043 ATRNO75882 1429 aa11□□□□□ -0.65
HTT-205ENST00000509043 ARAP2Q8WZ64 1704 aa10.99□□□□□ -0.65
HTT-205ENST00000509043 STX6O43752 255 aa10.99□□□□□ -0.65
HTT-205ENST00000509043 NTSR2O95665 410 aa10.99□□□□□ -0.65
HTT-205ENST00000509043 ZSCAN22P10073 491 aaPredicted RBP10.99□□□□□ -0.65
HTT-205ENST00000509043 FGFR2P21802 821 aa10.99□□□□□ -0.65
HTT-205ENST00000509043 IGHMBP2P38935 993 aaKnown RBP10.99□□□□□ -0.65
HTT-205ENST00000509043 FKBP4Q02790 459 aaKnown RBP eCLIP10.99□□□□□ -0.65
HTT-205ENST00000509043 UBE3CQ15386 1083 aa10.99□□□□□ -0.65
HTT-205ENST00000509043 NOL8Q76FK4 1167 aaKnown RBP10.99□□□□□ -0.65
HTT-205ENST00000509043 TMEM87AQ8NBN3 555 aa10.99□□□□□ -0.65
HTT-205ENST00000509043 MPHOSPH8Q99549 860 aa10.99□□□□□ -0.65
HTT-205ENST00000509043 LLPHQ9BRT6 129 aaKnown RBP10.99□□□□□ -0.65
HTT-205ENST00000509043 NYXQ9GZU5 481 aa10.99□□□□□ -0.65
HTT-205ENST00000509043 NIP7Q9Y221 180 aaKnown RBP eCLIP10.99□□□□□ -0.65
HTT-205ENST00000509043 MAST3O60307 1309 aa10.99□□□□□ -0.65
HTT-205ENST00000509043 NHSQ6T4R5 1651 aa10.98□□□□□ -0.65
HTT-205ENST00000509043 CYP21A2P08686 494 aa10.98□□□□□ -0.65
HTT-205ENST00000509043 HSPD1P10809 573 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms