RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 H7C1W4 665 aa16.04■□□□□ 0.16
PDPN-208ENST00000509009 PSMD14O00487 310 aa16.04■□□□□ 0.16
PDPN-208ENST00000509009 VAMP4O75379 141 aa16.04■□□□□ 0.16
PDPN-208ENST00000509009 TTLL11Q8NHH1 800 aa16.04■□□□□ 0.16
PDPN-208ENST00000509009 ZC3H15Q8WU90 426 aaKnown RBP16.04■□□□□ 0.16
PDPN-208ENST00000509009 FANCIQ9NVI1 1328 aa16.03■□□□□ 0.16
PDPN-208ENST00000509009 NEURL1BA8MQ27 555 aa16.03■□□□□ 0.16
PDPN-208ENST00000509009 ECE2O60344 883 aa16.03■□□□□ 0.16
PDPN-208ENST00000509009 CWF19L2Q2TBE0 894 aaKnown RBP16.03■□□□□ 0.16
PDPN-208ENST00000509009 TRPM4Q8TD43 1214 aa16.03■□□□□ 0.16
PDPN-208ENST00000509009 ANKIB1Q9P2G1 1089 aa16.03■□□□□ 0.16
PDPN-208ENST00000509009 GGA1Q9UJY5 639 aa16.03■□□□□ 0.16
PDPN-208ENST00000509009 ABT1Q9ULW3 272 aaKnown RBP16.03■□□□□ 0.16
PDPN-208ENST00000509009 CTSWP56202 376 aa16.02■□□□□ 0.16
PDPN-208ENST00000509009 EXOSC9Q06265 439 aaKnown RBP16.02■□□□□ 0.16
PDPN-208ENST00000509009 ANKRD18AQ8IVF6 992 aa16.02■□□□□ 0.16
PDPN-208ENST00000509009 MICALL2Q8IY33 904 aa16.02■□□□□ 0.16
PDPN-208ENST00000509009 GLIS2Q9BZE0 524 aaPredicted RBP16.02■□□□□ 0.16
PDPN-208ENST00000509009 LRRC37AA6NMS7 1700 aa16.02■□□□□ 0.15
PDPN-208ENST00000509009 WDR33Q9C0J8 1336 aaKnown RBP16.01■□□□□ 0.15
PDPN-208ENST00000509009 FOXN1O15353 648 aa16.01■□□□□ 0.15
PDPN-208ENST00000509009 UFL1O94874 794 aa16.01■□□□□ 0.15
PDPN-208ENST00000509009 FLIIQ13045 1269 aa16.01■□□□□ 0.15
PDPN-208ENST00000509009 SAMD7Q7Z3H4 446 aa16.01■□□□□ 0.15
PDPN-208ENST00000509009 TNS4Q8IZW8 715 aa16.01■□□□□ 0.15
PDPN-208ENST00000509009 SPINK5Q9NQ38 1064 aaPredicted RBP16.01■□□□□ 0.15
PDPN-208ENST00000509009 WBP1LQ9NX94 342 aa16.01■□□□□ 0.15
PDPN-208ENST00000509009 RTL9Q8NET4 1388 aa16■□□□□ 0.15
PDPN-208ENST00000509009 WTIPA6NIX2 430 aaPredicted RBP16■□□□□ 0.15
PDPN-208ENST00000509009 VIL1P09327 827 aaKnown RBP16■□□□□ 0.15
PDPN-208ENST00000509009 RPS12P25398 132 aaKnown RBP16■□□□□ 0.15
PDPN-208ENST00000509009 GCKRQ14397 625 aa16■□□□□ 0.15
PDPN-208ENST00000509009 CDC37L1Q7L3B6 337 aa16■□□□□ 0.15
PDPN-208ENST00000509009 FAM9BQ8IZU0 186 aa16■□□□□ 0.15
PDPN-208ENST00000509009 CDC5LQ99459 802 aaKnown RBP16■□□□□ 0.15
PDPN-208ENST00000509009 GREM2Q9H772 168 aa16■□□□□ 0.15
PDPN-208ENST00000509009 BSDC1Q9NW68 430 aaPredicted RBP16■□□□□ 0.15
PDPN-208ENST00000509009 MINPP1Q9UNW1 487 aa16■□□□□ 0.15
PDPN-208ENST00000509009 G3V3G9 751 aa15.99■□□□□ 0.15
PDPN-208ENST00000509009 ATP2B4P23634 1241 aa15.99■□□□□ 0.15
PDPN-208ENST00000509009 FKBP5Q13451 457 aaPredicted RBP15.99■□□□□ 0.15
PDPN-208ENST00000509009 TBC1D10BQ4KMP7 808 aaPredicted RBP15.99■□□□□ 0.15
PDPN-208ENST00000509009 DCAF8Q5TAQ9 597 aa15.99■□□□□ 0.15
PDPN-208ENST00000509009 UBE3BQ7Z3V4 1068 aa15.99■□□□□ 0.15
PDPN-208ENST00000509009 USP48Q86UV5 1035 aa15.99■□□□□ 0.15
PDPN-208ENST00000509009 DNAAF4Q8WXU2 420 aa15.99■□□□□ 0.15
PDPN-208ENST00000509009 TLL2Q9Y6L7 1015 aa15.99■□□□□ 0.15
PDPN-208ENST00000509009 XDHP47989 1333 aa15.98■□□□□ 0.15
PDPN-208ENST00000509009 CELF2O95319 508 aaKnown RBP15.98■□□□□ 0.15
PDPN-208ENST00000509009 EGFRP00533 1210 aa15.98■□□□□ 0.15
PDPN-208ENST00000509009 CASP7P55210 303 aa15.98■□□□□ 0.15
PDPN-208ENST00000509009 RBM26Q5T8P6 1007 aaKnown RBP15.98■□□□□ 0.15
PDPN-208ENST00000509009 LINS1Q8NG48 757 aa15.98■□□□□ 0.15
PDPN-208ENST00000509009 CAPNS2Q96L46 248 aa15.98■□□□□ 0.15
PDPN-208ENST00000509009 PLA2G12BQ9BX93 195 aa15.98■□□□□ 0.15
PDPN-208ENST00000509009 CSF1RP07333 972 aa15.97■□□□□ 0.15
PDPN-208ENST00000509009 CYP4F22Q6NT55 531 aa15.97■□□□□ 0.15
PDPN-208ENST00000509009 DLK2Q6UY11 383 aa15.97■□□□□ 0.15
PDPN-208ENST00000509009 SAPCD2Q86UD0 394 aa15.97■□□□□ 0.15
PDPN-208ENST00000509009 AIDAQ96BJ3 306 aa15.97■□□□□ 0.15
PDPN-208ENST00000509009 ECE1P42892 770 aa15.96■□□□□ 0.15
PDPN-208ENST00000509009 CTCFP49711 727 aaPredicted RBP15.96■□□□□ 0.15
PDPN-208ENST00000509009 MAP2K1Q02750 393 aaPredicted RBP15.96■□□□□ 0.15
PDPN-208ENST00000509009 MYH16Q9H6N6 1097 aa15.96■□□□□ 0.15
PDPN-208ENST00000509009 PRDM10Q9NQV6 1147 aa15.96■□□□□ 0.15
PDPN-208ENST00000509009 CCT4P50991 539 aaKnown RBP15.95■□□□□ 0.14
PDPN-208ENST00000509009 RSBN1LQ6PCB5 846 aaPredicted RBP15.95■□□□□ 0.14
PDPN-208ENST00000509009 PAXIP1Q6ZW49 1069 aaPredicted RBP15.95■□□□□ 0.14
PDPN-208ENST00000509009 PODNQ7Z5L7 613 aa15.95■□□□□ 0.14
PDPN-208ENST00000509009 F6X3S4 739 aa15.94■□□□□ 0.14
PDPN-208ENST00000509009 ITGA6P23229 1130 aa15.94■□□□□ 0.14
PDPN-208ENST00000509009 IGHMBP2P38935 993 aaKnown RBP15.94■□□□□ 0.14
PDPN-208ENST00000509009 ZNF280AP59817 542 aaPredicted RBP15.94■□□□□ 0.14
PDPN-208ENST00000509009 GRM1Q13255 1194 aa15.94■□□□□ 0.14
PDPN-208ENST00000509009 KRT26Q7Z3Y9 468 aa15.94■□□□□ 0.14
PDPN-208ENST00000509009 AGBL3Q8NEM8 1001 aa15.94■□□□□ 0.14
PDPN-208ENST00000509009 GMLQ99445 158 aa15.94■□□□□ 0.14
PDPN-208ENST00000509009 ZNF408Q9H9D4 720 aa15.94■□□□□ 0.14
PDPN-208ENST00000509009 USP17L3A6NCW0 530 aa15.93■□□□□ 0.14
PDPN-208ENST00000509009 USP17L4A6NCW7 530 aa15.93■□□□□ 0.14
PDPN-208ENST00000509009 MAP2K2P36507 400 aa15.93■□□□□ 0.14
PDPN-208ENST00000509009 LBX1P52954 281 aa15.93■□□□□ 0.14
PDPN-208ENST00000509009 BEND3Q5T5X7 828 aa15.93■□□□□ 0.14
PDPN-208ENST00000509009 USP17L1Q7RTZ2 530 aa15.93■□□□□ 0.14
PDPN-208ENST00000509009 DCPSQ96C86 337 aaKnown RBP15.93■□□□□ 0.14
PDPN-208ENST00000509009 HHIPL1Q96JK4 782 aa15.93■□□□□ 0.14
PDPN-208ENST00000509009 LEMD3Q9Y2U8 911 aa15.93■□□□□ 0.14
PDPN-208ENST00000509009 AOC2O75106 756 aa15.92■□□□□ 0.14
PDPN-208ENST00000509009 FOXO4P98177 505 aa15.92■□□□□ 0.14
PDPN-208ENST00000509009 KIF4BQ2VIQ3 1234 aa15.92■□□□□ 0.14
PDPN-208ENST00000509009 FAM161AQ3B820 660 aa15.92■□□□□ 0.14
PDPN-208ENST00000509009 TXNRD3Q86VQ6 643 aa15.92■□□□□ 0.14
PDPN-208ENST00000509009 SCN9AQ15858 1988 aa15.92■□□□□ 0.14
PDPN-208ENST00000509009 TRPM7Q96QT4 1865 aa15.92■□□□□ 0.14
PDPN-208ENST00000509009 CAPN15O75808 1086 aa15.91■□□□□ 0.14
PDPN-208ENST00000509009 USP17L8P0C7I0 530 aa15.91■□□□□ 0.14
PDPN-208ENST00000509009 HSPA8P11142 646 aaKnown RBP15.91■□□□□ 0.14
PDPN-208ENST00000509009 SCARF1Q14162 830 aa15.91■□□□□ 0.14
PDPN-208ENST00000509009 MPHOSPH8Q99549 860 aa15.91■□□□□ 0.14
PDPN-208ENST00000509009 ANKRD2Q9GZV1 360 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms