RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 XDHP47989 1333 aa17.4■□□□□ 0.38
CCHCR1-227ENST00000508852 YDJCA8MPS7 323 aa17.39■□□□□ 0.37
CCHCR1-227ENST00000508852 RIMBP2O15034 1052 aa17.39■□□□□ 0.37
CCHCR1-227ENST00000508852 ECE2O60344 883 aa17.39■□□□□ 0.37
CCHCR1-227ENST00000508852 CTSWP56202 376 aa17.39■□□□□ 0.37
CCHCR1-227ENST00000508852 DBNDD1Q9H9R9 158 aa17.39■□□□□ 0.37
CCHCR1-227ENST00000508852 RTL9Q8NET4 1388 aa17.39■□□□□ 0.37
CCHCR1-227ENST00000508852 UFL1O94874 794 aa17.38■□□□□ 0.37
CCHCR1-227ENST00000508852 ATP2B4P23634 1241 aa17.38■□□□□ 0.37
CCHCR1-227ENST00000508852 CTCFP49711 727 aaPredicted RBP17.38■□□□□ 0.37
CCHCR1-227ENST00000508852 MICALL2Q8IY33 904 aa17.38■□□□□ 0.37
CCHCR1-227ENST00000508852 HHIPL1Q96JK4 782 aa17.38■□□□□ 0.37
CCHCR1-227ENST00000508852 PRDM10Q9NQV6 1147 aa17.38■□□□□ 0.37
CCHCR1-227ENST00000508852 SEC31BQ9NQW1 1179 aa17.38■□□□□ 0.37
CCHCR1-227ENST00000508852 WDR33Q9C0J8 1336 aaKnown RBP17.38■□□□□ 0.37
CCHCR1-227ENST00000508852 NEURL1BA8MQ27 555 aa17.37■□□□□ 0.37
CCHCR1-227ENST00000508852 PSMD14O00487 310 aa17.37■□□□□ 0.37
CCHCR1-227ENST00000508852 IGKV5-2P06315 115 aa17.37■□□□□ 0.37
CCHCR1-227ENST00000508852 FLIIQ13045 1269 aa17.37■□□□□ 0.37
CCHCR1-227ENST00000508852 BSDC1Q9NW68 430 aaPredicted RBP17.37■□□□□ 0.37
CCHCR1-227ENST00000508852 TLL2Q9Y6L7 1015 aa17.37■□□□□ 0.37
CCHCR1-227ENST00000508852 FANCIQ9NVI1 1328 aa17.37■□□□□ 0.37
CCHCR1-227ENST00000508852 FKBP5Q13451 457 aaPredicted RBP17.36■□□□□ 0.37
CCHCR1-227ENST00000508852 BEGAINQ9BUH8 593 aa17.36■□□□□ 0.37
CCHCR1-227ENST00000508852 WBP1LQ9NX94 342 aa17.36■□□□□ 0.37
CCHCR1-227ENST00000508852 ZNF609O15014 1411 aa17.36■□□□□ 0.37
CCHCR1-227ENST00000508852 H7C1W4 665 aa17.35■□□□□ 0.37
CCHCR1-227ENST00000508852 VIL1P09327 827 aaKnown RBP17.35■□□□□ 0.37
CCHCR1-227ENST00000508852 IGHMBP2P38935 993 aaKnown RBP17.35■□□□□ 0.37
CCHCR1-227ENST00000508852 MMP14P50281 582 aa17.35■□□□□ 0.37
CCHCR1-227ENST00000508852 DOK7Q18PE1 504 aa17.35■□□□□ 0.37
CCHCR1-227ENST00000508852 CST9Q5W186 159 aa17.35■□□□□ 0.37
CCHCR1-227ENST00000508852 PODNQ7Z5L7 613 aa17.35■□□□□ 0.37
CCHCR1-227ENST00000508852 AGBL3Q8NEM8 1001 aa17.35■□□□□ 0.37
CCHCR1-227ENST00000508852 LINS1Q8NG48 757 aa17.35■□□□□ 0.37
CCHCR1-227ENST00000508852 TTLL11Q8NHH1 800 aa17.35■□□□□ 0.37
CCHCR1-227ENST00000508852 DNAAF4Q8WXU2 420 aa17.35■□□□□ 0.37
CCHCR1-227ENST00000508852 PLA2G12BQ9BX93 195 aa17.35■□□□□ 0.37
CCHCR1-227ENST00000508852 PSME4Q14997 1843 aa17.35■□□□□ 0.37
CCHCR1-227ENST00000508852 CELF2O95319 508 aaKnown RBP17.34■□□□□ 0.37
CCHCR1-227ENST00000508852 MAP2K2P36507 400 aa17.34■□□□□ 0.37
CCHCR1-227ENST00000508852 GCKRQ14397 625 aa17.34■□□□□ 0.37
CCHCR1-227ENST00000508852 PAXIP1Q6ZW49 1069 aaPredicted RBP17.34■□□□□ 0.37
CCHCR1-227ENST00000508852 DCPSQ96C86 337 aaKnown RBP17.34■□□□□ 0.37
CCHCR1-227ENST00000508852 CAPNS2Q96L46 248 aa17.34■□□□□ 0.37
CCHCR1-227ENST00000508852 TRAF5O00463 557 aa17.33■□□□□ 0.36
CCHCR1-227ENST00000508852 VAMP4O75379 141 aa17.33■□□□□ 0.36
CCHCR1-227ENST00000508852 HIRAP54198 1017 aaPredicted RBP17.33■□□□□ 0.36
CCHCR1-227ENST00000508852 CWF19L2Q2TBE0 894 aaKnown RBP17.33■□□□□ 0.36
CCHCR1-227ENST00000508852 UBE3BQ7Z3V4 1068 aa17.33■□□□□ 0.36
CCHCR1-227ENST00000508852 TRPM4Q8TD43 1214 aa17.33■□□□□ 0.36
CCHCR1-227ENST00000508852 ANKRD2Q9GZV1 360 aa17.33■□□□□ 0.36
CCHCR1-227ENST00000508852 ZBTB12Q9Y330 459 aaPredicted RBP17.33■□□□□ 0.36
CCHCR1-227ENST00000508852 THSD7BQ9C0I4 1608 aa17.32■□□□□ 0.36
CCHCR1-227ENST00000508852 MED23Q9ULK4 1368 aa17.32■□□□□ 0.36
CCHCR1-227ENST00000508852 FOXN1O15353 648 aa17.32■□□□□ 0.36
CCHCR1-227ENST00000508852 G2E3Q7L622 706 aa17.32■□□□□ 0.36
CCHCR1-227ENST00000508852 SAPCD2Q86UD0 394 aa17.32■□□□□ 0.36
CCHCR1-227ENST00000508852 JARID2Q92833 1246 aaPredicted RBP17.32■□□□□ 0.36
CCHCR1-227ENST00000508852 GPR101Q96P66 508 aaPredicted RBP17.32■□□□□ 0.36
CCHCR1-227ENST00000508852 CCDC85AQ96PX6 553 aaPredicted RBP17.32■□□□□ 0.36
CCHCR1-227ENST00000508852 GLIS2Q9BZE0 524 aaPredicted RBP17.32■□□□□ 0.36
CCHCR1-227ENST00000508852 LEMD3Q9Y2U8 911 aa17.32■□□□□ 0.36
CCHCR1-227ENST00000508852 COL4A1P02462 1669 aa17.32■□□□□ 0.36
CCHCR1-227ENST00000508852 CA12O43570 354 aa17.31■□□□□ 0.36
CCHCR1-227ENST00000508852 EXOSC9Q06265 439 aaKnown RBP17.31■□□□□ 0.36
CCHCR1-227ENST00000508852 RSBN1LQ6PCB5 846 aaPredicted RBP17.31■□□□□ 0.36
CCHCR1-227ENST00000508852 MPHOSPH8Q99549 860 aa17.31■□□□□ 0.36
CCHCR1-227ENST00000508852 GREM2Q9H772 168 aa17.31■□□□□ 0.36
CCHCR1-227ENST00000508852 MINPP1Q9UNW1 487 aa17.31■□□□□ 0.36
CCHCR1-227ENST00000508852 MYO3BQ8WXR4 1341 aa17.3■□□□□ 0.36
CCHCR1-227ENST00000508852 USP17L3A6NCW0 530 aa17.3■□□□□ 0.36
CCHCR1-227ENST00000508852 USP17L4A6NCW7 530 aa17.3■□□□□ 0.36
CCHCR1-227ENST00000508852 KIF4BQ2VIQ3 1234 aa17.3■□□□□ 0.36
CCHCR1-227ENST00000508852 TBC1D10BQ4KMP7 808 aaPredicted RBP17.3■□□□□ 0.36
CCHCR1-227ENST00000508852 USP17L1Q7RTZ2 530 aa17.3■□□□□ 0.36
CCHCR1-227ENST00000508852 SAMD7Q7Z3H4 446 aa17.3■□□□□ 0.36
CCHCR1-227ENST00000508852 KRT26Q7Z3Y9 468 aa17.3■□□□□ 0.36
CCHCR1-227ENST00000508852 SALL2Q9Y467 1007 aaPredicted RBP17.3■□□□□ 0.36
CCHCR1-227ENST00000508852 SPEF2Q9C093 1822 aa17.3■□□□□ 0.36
CCHCR1-227ENST00000508852 SCN9AQ15858 1988 aa17.29■□□□□ 0.36
CCHCR1-227ENST00000508852 CSF1RP07333 972 aa17.29■□□□□ 0.36
CCHCR1-227ENST00000508852 CCT4P50991 539 aaKnown RBP17.29■□□□□ 0.36
CCHCR1-227ENST00000508852 ZNF280AP59817 542 aaPredicted RBP17.29■□□□□ 0.36
CCHCR1-227ENST00000508852 CYP4F22Q6NT55 531 aa17.29■□□□□ 0.36
CCHCR1-227ENST00000508852 USP48Q86UV5 1035 aa17.29■□□□□ 0.36
CCHCR1-227ENST00000508852 SULF1Q8IWU6 871 aa17.29■□□□□ 0.36
CCHCR1-227ENST00000508852 COA1Q9GZY4 146 aa17.29■□□□□ 0.36
CCHCR1-227ENST00000508852 POLR2AP24928 1970 aaKnown RBP17.29■□□□□ 0.36
CCHCR1-227ENST00000508852 ANKRD18BA2A2Z9 1011 aa17.28■□□□□ 0.36
CCHCR1-227ENST00000508852 USP17L8P0C7I0 530 aa17.28■□□□□ 0.36
CCHCR1-227ENST00000508852 ITGA6P23229 1130 aa17.28■□□□□ 0.36
CCHCR1-227ENST00000508852 FMR1Q06787 632 aaKnown RBP eCLIP17.28■□□□□ 0.366e-7■■□□□ 13.9
CCHCR1-227ENST00000508852 FAM9BQ8IZU0 186 aa17.28■□□□□ 0.36
CCHCR1-227ENST00000508852 C2orf69Q8N8R5 385 aa17.28■□□□□ 0.36
CCHCR1-227ENST00000508852 ZNF408Q9H9D4 720 aa17.28■□□□□ 0.36
CCHCR1-227ENST00000508852 KCNQ5Q9NR82 932 aa17.28■□□□□ 0.36
CCHCR1-227ENST00000508852 NOGQ13253 232 aa17.27■□□□□ 0.36
CCHCR1-227ENST00000508852 RBM26Q5T8P6 1007 aaKnown RBP17.27■□□□□ 0.36
CCHCR1-227ENST00000508852 OGFOD1Q8N543 542 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms