RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 POLLQ9UGP5 575 aa12.91□□□□□ -0.34
UBE2D3-227ENST00000508818 FKBP5Q13451 457 aaPredicted RBP12.9□□□□□ -0.34
UBE2D3-227ENST00000508818 DOK7Q18PE1 504 aa12.9□□□□□ -0.34
UBE2D3-227ENST00000508818 DEFB115Q30KQ5 88 aa12.9□□□□□ -0.34
UBE2D3-227ENST00000508818 TBC1D16Q8TBP0 767 aa12.9□□□□□ -0.34
UBE2D3-227ENST00000508818 CDC5LQ99459 802 aaKnown RBP12.9□□□□□ -0.34
UBE2D3-227ENST00000508818 CNOT7Q9UIV1 285 aaKnown RBP12.9□□□□□ -0.34
UBE2D3-227ENST00000508818 GGA1Q9UJY5 639 aa12.9□□□□□ -0.34
UBE2D3-227ENST00000508818 TAF1P21675 1872 aa12.9□□□□□ -0.34
UBE2D3-227ENST00000508818 CNTNAP1P78357 1384 aa12.9□□□□□ -0.34
UBE2D3-227ENST00000508818 DDX60Q8IY21 1712 aaKnown RBP12.9□□□□□ -0.34
UBE2D3-227ENST00000508818 CDHR2Q9BYE9 1310 aa12.89□□□□□ -0.35
UBE2D3-227ENST00000508818 ECE2O60344 883 aa12.89□□□□□ -0.35
UBE2D3-227ENST00000508818 UFL1O94874 794 aa12.89□□□□□ -0.35
UBE2D3-227ENST00000508818 VEGFBP49765 207 aa12.89□□□□□ -0.35
UBE2D3-227ENST00000508818 PAXIP1Q6ZW49 1069 aaPredicted RBP12.89□□□□□ -0.35
UBE2D3-227ENST00000508818 G2E3Q7L622 706 aa12.89□□□□□ -0.35
UBE2D3-227ENST00000508818 AIDAQ96BJ3 306 aa12.89□□□□□ -0.35
UBE2D3-227ENST00000508818 FANCIQ9NVI1 1328 aa12.88□□□□□ -0.35
UBE2D3-227ENST00000508818 YDJCA8MPS7 323 aa12.88□□□□□ -0.35
UBE2D3-227ENST00000508818 NEURL1BA8MQ27 555 aa12.88□□□□□ -0.35
UBE2D3-227ENST00000508818 IGKV5-2P06315 115 aa12.88□□□□□ -0.35
UBE2D3-227ENST00000508818 EXOSC9Q06265 439 aaKnown RBP12.88□□□□□ -0.35
UBE2D3-227ENST00000508818 FLIIQ13045 1269 aa12.88□□□□□ -0.35
UBE2D3-227ENST00000508818 CWF19L2Q2TBE0 894 aaKnown RBP12.88□□□□□ -0.35
UBE2D3-227ENST00000508818 MYH16Q9H6N6 1097 aa12.88□□□□□ -0.35
UBE2D3-227ENST00000508818 PODXL2Q9NZ53 605 aa12.88□□□□□ -0.35
UBE2D3-227ENST00000508818 PSMD14O00487 310 aa12.87□□□□□ -0.35
UBE2D3-227ENST00000508818 VAMP4O75379 141 aa12.87□□□□□ -0.35
UBE2D3-227ENST00000508818 CTSWP56202 376 aa12.87□□□□□ -0.35
UBE2D3-227ENST00000508818 COL13A1Q5TAT6 717 aaPredicted RBP12.87□□□□□ -0.35
UBE2D3-227ENST00000508818 UBE3BQ7Z3V4 1068 aa12.87□□□□□ -0.35
UBE2D3-227ENST00000508818 MICALL2Q8IY33 904 aa12.87□□□□□ -0.35
UBE2D3-227ENST00000508818 ZC3H15Q8WU90 426 aaKnown RBP12.87□□□□□ -0.35
UBE2D3-227ENST00000508818 DNAAF4Q8WXU2 420 aa12.87□□□□□ -0.35
UBE2D3-227ENST00000508818 DPF2Q92785 391 aa12.87□□□□□ -0.35
UBE2D3-227ENST00000508818 GPR101Q96P66 508 aaPredicted RBP12.87□□□□□ -0.35
UBE2D3-227ENST00000508818 XDHP47989 1333 aa12.87□□□□□ -0.35
UBE2D3-227ENST00000508818 RASSF10A6NK89 507 aa12.86□□□□□ -0.35
UBE2D3-227ENST00000508818 H7C1W4 665 aa12.86□□□□□ -0.35
UBE2D3-227ENST00000508818 TRAF5O00463 557 aa12.86□□□□□ -0.35
UBE2D3-227ENST00000508818 ATP2B4P23634 1241 aa12.86□□□□□ -0.35
UBE2D3-227ENST00000508818 RPS12P25398 132 aaKnown RBP12.86□□□□□ -0.35
UBE2D3-227ENST00000508818 ECE1P42892 770 aa12.86□□□□□ -0.35
UBE2D3-227ENST00000508818 GRM1Q13255 1194 aa12.86□□□□□ -0.35
UBE2D3-227ENST00000508818 GCKRQ14397 625 aa12.86□□□□□ -0.35
UBE2D3-227ENST00000508818 RBM26Q5T8P6 1007 aaKnown RBP12.86□□□□□ -0.35
UBE2D3-227ENST00000508818 CDC37L1Q7L3B6 337 aa12.86□□□□□ -0.35
UBE2D3-227ENST00000508818 TNS4Q8IZW8 715 aa12.86□□□□□ -0.35
UBE2D3-227ENST00000508818 TTLL11Q8NHH1 800 aa12.86□□□□□ -0.35
UBE2D3-227ENST00000508818 ADAMTSL1Q8N6G6 1762 aa12.86□□□□□ -0.35
UBE2D3-227ENST00000508818 LTBP1Q14766 1721 aa12.85□□□□□ -0.35
UBE2D3-227ENST00000508818 CELF2O95319 508 aaKnown RBP12.85□□□□□ -0.35
UBE2D3-227ENST00000508818 IGHMBP2P38935 993 aaKnown RBP12.85□□□□□ -0.35
UBE2D3-227ENST00000508818 FMR1Q06787 632 aaKnown RBP eCLIP12.85□□□□□ -0.35
UBE2D3-227ENST00000508818 SAMD7Q7Z3H4 446 aa12.85□□□□□ -0.35
UBE2D3-227ENST00000508818 LINS1Q8NG48 757 aa12.85□□□□□ -0.35
UBE2D3-227ENST00000508818 GLIS2Q9BZE0 524 aaPredicted RBP12.85□□□□□ -0.35
UBE2D3-227ENST00000508818 GREM2Q9H772 168 aa12.85□□□□□ -0.35
UBE2D3-227ENST00000508818 ZNF408Q9H9D4 720 aa12.85□□□□□ -0.35
UBE2D3-227ENST00000508818 KCNQ5Q9NR82 932 aa12.85□□□□□ -0.35
UBE2D3-227ENST00000508818 PGAP2Q9UHJ9 254 aa12.85□□□□□ -0.35
UBE2D3-227ENST00000508818 WDR33Q9C0J8 1336 aaKnown RBP12.85□□□□□ -0.35
UBE2D3-227ENST00000508818 SHTN1A0MZ66 631 aa12.84□□□□□ -0.35
UBE2D3-227ENST00000508818 HIRAP54198 1017 aaPredicted RBP12.84□□□□□ -0.35
UBE2D3-227ENST00000508818 TBC1D10BQ4KMP7 808 aaPredicted RBP12.84□□□□□ -0.35
UBE2D3-227ENST00000508818 CST9Q5W186 159 aa12.84□□□□□ -0.35
UBE2D3-227ENST00000508818 USP48Q86UV5 1035 aa12.84□□□□□ -0.35
UBE2D3-227ENST00000508818 TRPM4Q8TD43 1214 aa12.84□□□□□ -0.35
UBE2D3-227ENST00000508818 DCPSQ96C86 337 aaKnown RBP12.84□□□□□ -0.35
UBE2D3-227ENST00000508818 MPHOSPH8Q99549 860 aa12.84□□□□□ -0.35
UBE2D3-227ENST00000508818 BSDC1Q9NW68 430 aaPredicted RBP12.84□□□□□ -0.35
UBE2D3-227ENST00000508818 DUOX1Q9NRD9 1551 aa12.84□□□□□ -0.35
UBE2D3-227ENST00000508818 LRRC37AA6NMS7 1700 aa12.84□□□□□ -0.35
UBE2D3-227ENST00000508818 VIL1P09327 827 aaKnown RBP12.83□□□□□ -0.36
UBE2D3-227ENST00000508818 CTCFP49711 727 aaPredicted RBP12.83□□□□□ -0.36
UBE2D3-227ENST00000508818 MAP2K1Q02750 393 aaPredicted RBP12.83□□□□□ -0.36
UBE2D3-227ENST00000508818 CAPNS2Q96L46 248 aa12.83□□□□□ -0.36
UBE2D3-227ENST00000508818 BEGAINQ9BUH8 593 aa12.83□□□□□ -0.36
UBE2D3-227ENST00000508818 MINPP1Q9UNW1 487 aa12.83□□□□□ -0.36
UBE2D3-227ENST00000508818 KCNJ4P48050 445 aa12.82□□□□□ -0.36
UBE2D3-227ENST00000508818 PODNQ7Z5L7 613 aa12.82□□□□□ -0.36
UBE2D3-227ENST00000508818 ANKRD2Q9GZV1 360 aa12.82□□□□□ -0.36
UBE2D3-227ENST00000508818 CHMP3Q9Y3E7 222 aa12.82□□□□□ -0.36
UBE2D3-227ENST00000508818 TLL2Q9Y6L7 1015 aa12.82□□□□□ -0.36
UBE2D3-227ENST00000508818 RTL9Q8NET4 1388 aa12.81□□□□□ -0.36
UBE2D3-227ENST00000508818 ANKRD18BA2A2Z9 1011 aa12.81□□□□□ -0.36
UBE2D3-227ENST00000508818 USP17L3A6NCW0 530 aa12.81□□□□□ -0.36
UBE2D3-227ENST00000508818 USP17L4A6NCW7 530 aa12.81□□□□□ -0.36
UBE2D3-227ENST00000508818 F6X3S4 739 aa12.81□□□□□ -0.36
UBE2D3-227ENST00000508818 FOXN1O15353 648 aa12.81□□□□□ -0.36
UBE2D3-227ENST00000508818 ITGA6P23229 1130 aa12.81□□□□□ -0.36
UBE2D3-227ENST00000508818 CCT4P50991 539 aaKnown RBP12.81□□□□□ -0.36
UBE2D3-227ENST00000508818 KIF4BQ2VIQ3 1234 aa12.81□□□□□ -0.36
UBE2D3-227ENST00000508818 CYP4F22Q6NT55 531 aa12.81□□□□□ -0.36
UBE2D3-227ENST00000508818 RSBN1LQ6PCB5 846 aaPredicted RBP12.81□□□□□ -0.36
UBE2D3-227ENST00000508818 USP17L1Q7RTZ2 530 aa12.81□□□□□ -0.36
UBE2D3-227ENST00000508818 KRT26Q7Z3Y9 468 aa12.81□□□□□ -0.36
UBE2D3-227ENST00000508818 AGBL3Q8NEM8 1001 aa12.81□□□□□ -0.36
UBE2D3-227ENST00000508818 FBXW7Q969H0 707 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms