RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 PDE8AO60658 829 aa13.84□□□□□ -0.19
PRPF40B-203ENST00000508736 GPTP24298 496 aa13.84□□□□□ -0.19
PRPF40B-203ENST00000508736 ZSCAN23Q3MJ62 389 aa13.84□□□□□ -0.19
PRPF40B-203ENST00000508736 LRRC24Q50LG9 513 aa13.84□□□□□ -0.19
PRPF40B-203ENST00000508736 PARP10Q53GL7 1025 aa13.84□□□□□ -0.19
PRPF40B-203ENST00000508736 TRIM44Q96DX7 344 aaPredicted RBP13.84□□□□□ -0.19
PRPF40B-203ENST00000508736 CEP126Q9P2H0 1117 aa13.84□□□□□ -0.19
PRPF40B-203ENST00000508736 TRMT112Q9UI30 125 aaKnown RBP13.84□□□□□ -0.19
PRPF40B-203ENST00000508736 LIMCH1Q9UPQ0 1083 aa13.84□□□□□ -0.19
PRPF40B-203ENST00000508736 MED23Q9ULK4 1368 aa13.83□□□□□ -0.19
PRPF40B-203ENST00000508736 SPEF2Q9C093 1822 aa13.83□□□□□ -0.19
PRPF40B-203ENST00000508736 CCDC171Q6TFL3 1326 aa13.83□□□□□ -0.2
PRPF40B-203ENST00000508736 UBN2Q6ZU65 1347 aa13.83□□□□□ -0.2
PRPF40B-203ENST00000508736 IRS4O14654 1257 aaPredicted RBP13.83□□□□□ -0.2
PRPF40B-203ENST00000508736 ZKSCAN1P17029 563 aaPredicted RBP13.83□□□□□ -0.2
PRPF40B-203ENST00000508736 NASPP49321 788 aaPredicted RBP13.83□□□□□ -0.2
PRPF40B-203ENST00000508736 CTSWP56202 376 aa13.83□□□□□ -0.2
PRPF40B-203ENST00000508736 CCDC173Q0VFZ6 552 aa13.83□□□□□ -0.2
PRPF40B-203ENST00000508736 ZNF594Q96JF6 807 aaPredicted RBP13.83□□□□□ -0.2
PRPF40B-203ENST00000508736 TTC14Q96N46 770 aa13.83□□□□□ -0.2
PRPF40B-203ENST00000508736 TM6SF1Q9BZW5 370 aa13.83□□□□□ -0.2
PRPF40B-203ENST00000508736 MYH3P11055 1940 aa13.83□□□□□ -0.2
PRPF40B-203ENST00000508736 HSP90B1P14625 803 aaKnown RBP13.82□□□□□ -0.2
PRPF40B-203ENST00000508736 NMIQ13287 307 aaPredicted RBP13.82□□□□□ -0.2
PRPF40B-203ENST00000508736 MAP4K1Q92918 833 aa13.82□□□□□ -0.2
PRPF40B-203ENST00000508736 A0A1B0GUL7 405 aa13.82□□□□□ -0.2
PRPF40B-203ENST00000508736 PLSCR1O15162 318 aa13.82□□□□□ -0.2
PRPF40B-203ENST00000508736 CAMTA2O94983 1202 aa13.82□□□□□ -0.2
PRPF40B-203ENST00000508736 CASTP20810 708 aaKnown RBP13.82□□□□□ -0.2
PRPF40B-203ENST00000508736 AK2P54819 239 aa13.82□□□□□ -0.2
PRPF40B-203ENST00000508736 NECTIN1Q15223 517 aa13.82□□□□□ -0.2
PRPF40B-203ENST00000508736 VPS53Q5VIR6 699 aa13.82□□□□□ -0.2
PRPF40B-203ENST00000508736 SYAP1Q96A49 352 aaPredicted RBP13.82□□□□□ -0.2
PRPF40B-203ENST00000508736 ZSCAN31Q96LW9 406 aaPredicted RBP13.82□□□□□ -0.2
PRPF40B-203ENST00000508736 PUS3Q9BZE2 481 aaKnown RBP13.82□□□□□ -0.2
PRPF40B-203ENST00000508736 CCNL1Q9UK58 526 aaPredicted RBP13.82□□□□□ -0.2
PRPF40B-203ENST00000508736 ABCC12Q96J65 1359 aa13.82□□□□□ -0.2
PRPF40B-203ENST00000508736 MYH14Q7Z406 1995 aaKnown RBP13.81□□□□□ -0.2
PRPF40B-203ENST00000508736 ANKRD18BA2A2Z9 1011 aa13.81□□□□□ -0.2
PRPF40B-203ENST00000508736 KCNJ4P48050 445 aa13.81□□□□□ -0.2
PRPF40B-203ENST00000508736 TAF7LQ5H9L4 462 aa13.81□□□□□ -0.2
PRPF40B-203ENST00000508736 FOXD4L5Q5VV16 416 aaPredicted RBP13.81□□□□□ -0.2
PRPF40B-203ENST00000508736 CLEC4GQ6UXB4 293 aa13.81□□□□□ -0.2
PRPF40B-203ENST00000508736 RASEFQ8IZ41 740 aa13.81□□□□□ -0.2
PRPF40B-203ENST00000508736 KBTBD3Q8NAB2 608 aa13.81□□□□□ -0.2
PRPF40B-203ENST00000508736 FOXD4L4Q8WXT5 416 aaPredicted RBP13.81□□□□□ -0.2
PRPF40B-203ENST00000508736 FAM227BQ96M60 508 aa13.81□□□□□ -0.2
PRPF40B-203ENST00000508736 NEUROD6Q96NK8 337 aa13.81□□□□□ -0.2
PRPF40B-203ENST00000508736 SH2B1Q9NRF2 756 aaPredicted RBP13.81□□□□□ -0.2
PRPF40B-203ENST00000508736 CYP46A1Q9Y6A2 500 aa13.81□□□□□ -0.2
PRPF40B-203ENST00000508736 LRP5O75197 1615 aa13.81□□□□□ -0.2
PRPF40B-203ENST00000508736 SH3TC1Q8TE82 1336 aa13.81□□□□□ -0.2
PRPF40B-203ENST00000508736 CNTNAP4Q9C0A0 1308 aa13.81□□□□□ -0.2
PRPF40B-203ENST00000508736 A0A0D9SFI3 127 aa13.8□□□□□ -0.2
PRPF40B-203ENST00000508736 ITGA6P23229 1130 aa13.8□□□□□ -0.2
PRPF40B-203ENST00000508736 TIMM10P62072 90 aa13.8□□□□□ -0.2
PRPF40B-203ENST00000508736 EN1Q05925 392 aaPredicted RBP13.8□□□□□ -0.2
PRPF40B-203ENST00000508736 TXNRD1Q16881 649 aa13.8□□□□□ -0.2
PRPF40B-203ENST00000508736 RNF20Q5VTR2 975 aa13.8□□□□□ -0.2
PRPF40B-203ENST00000508736 CCDC125Q86Z20 511 aa13.8□□□□□ -0.2
PRPF40B-203ENST00000508736 GPT2Q8TD30 523 aa13.8□□□□□ -0.2
PRPF40B-203ENST00000508736 RIPOR2Q9Y4F9 1068 aa13.8□□□□□ -0.2
PRPF40B-203ENST00000508736 BCORQ6W2J9 1755 aa13.8□□□□□ -0.2
PRPF40B-203ENST00000508736 PSMA5P28066 241 aa13.8□□□□□ -0.2
PRPF40B-203ENST00000508736 PTH1RQ03431 593 aa13.8□□□□□ -0.2
PRPF40B-203ENST00000508736 PRPF40BQ6NWY9 871 aaKnown RBP13.8□□□□□ -0.2
PRPF40B-203ENST00000508736 DEFB132Q7Z7B7 95 aa13.8□□□□□ -0.2
PRPF40B-203ENST00000508736 PROM2Q8N271 834 aa13.8□□□□□ -0.2
PRPF40B-203ENST00000508736 JAKMIP1Q96N16 626 aaKnown RBP13.8□□□□□ -0.2
PRPF40B-203ENST00000508736 GREM2Q9H772 168 aa13.8□□□□□ -0.2
PRPF40B-203ENST00000508736 LRRC4BQ9NT99 713 aa13.8□□□□□ -0.2
PRPF40B-203ENST00000508736 PDRG1Q9NUG6 133 aa13.8□□□□□ -0.2
PRPF40B-203ENST00000508736 SMC3Q9UQE7 1217 aa13.8□□□□□ -0.2
PRPF40B-203ENST00000508736 ZNF652Q9Y2D9 606 aa13.8□□□□□ -0.2
PRPF40B-203ENST00000508736 ATP6V1DQ9Y5K8 247 aa13.8□□□□□ -0.2
PRPF40B-203ENST00000508736 RIC1Q4ADV7 1423 aa13.79□□□□□ -0.2
PRPF40B-203ENST00000508736 BAG6P46379 1132 aa13.79□□□□□ -0.2
PRPF40B-203ENST00000508736 RC3H1Q5TC82 1133 aaKnown RBP13.79□□□□□ -0.2
PRPF40B-203ENST00000508736 RUFY3Q7L099 469 aa13.79□□□□□ -0.2
PRPF40B-203ENST00000508736 SYNE4Q8N205 404 aa13.79□□□□□ -0.2
PRPF40B-203ENST00000508736 UTP14AQ9BVJ6 771 aaKnown RBP13.79□□□□□ -0.2
PRPF40B-203ENST00000508736 ZSWIM6Q9HCJ5 1215 aa13.79□□□□□ -0.2
PRPF40B-203ENST00000508736 RRAGDQ9NQL2 400 aaPredicted RBP13.79□□□□□ -0.2
PRPF40B-203ENST00000508736 PAG1Q9NWQ8 432 aa13.79□□□□□ -0.2
PRPF40B-203ENST00000508736 RTL9Q8NET4 1388 aa13.79□□□□□ -0.2
PRPF40B-203ENST00000508736 LAMB2P55268 1798 aa13.78□□□□□ -0.2
PRPF40B-203ENST00000508736 RPAP1Q9BWH6 1393 aaPredicted RBP13.78□□□□□ -0.2
PRPF40B-203ENST00000508736 PHF14O94880 888 aa13.78□□□□□ -0.2
PRPF40B-203ENST00000508736 EZH2Q15910 746 aaKnown RBP13.78□□□□□ -0.2
PRPF40B-203ENST00000508736 SLC27A3Q5K4L6 730 aa13.78□□□□□ -0.2
PRPF40B-203ENST00000508736 CCDC158Q5M9N0 1113 aa13.78□□□□□ -0.2
PRPF40B-203ENST00000508736 SUSD4Q5VX71 490 aa13.78□□□□□ -0.2
PRPF40B-203ENST00000508736 USPL1Q5W0Q7 1092 aa13.78□□□□□ -0.2
PRPF40B-203ENST00000508736 LDHAL6AQ6ZMR3 332 aa13.78□□□□□ -0.2
PRPF40B-203ENST00000508736 UPF1Q92900 1129 aaKnown RBP eCLIP13.78□□□□□ -0.2
PRPF40B-203ENST00000508736 ZNF512BQ96KM6 892 aaPredicted RBP13.78□□□□□ -0.2
PRPF40B-203ENST00000508736 DNAJC2Q99543 621 aaKnown RBP13.78□□□□□ -0.2
PRPF40B-203ENST00000508736 HMG20BQ9P0W2 317 aa13.78□□□□□ -0.2
PRPF40B-203ENST00000508736 RBM8AQ9Y5S9 174 aaKnown RBP13.78□□□□□ -0.2
PRPF40B-203ENST00000508736 TCHHQ07283 1943 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms