RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 LARGE2Q8N3Y3 721 aa18.77■□□□□ 0.6
RNF4-210ENST00000508235 ANKRD2Q9GZV1 360 aa18.77■□□□□ 0.6
RNF4-210ENST00000508235 GGA1Q9UJY5 639 aa18.77■□□□□ 0.6
RNF4-210ENST00000508235 MINPP1Q9UNW1 487 aa18.77■□□□□ 0.6
RNF4-210ENST00000508235 C6orf229H3BNL8 230 aa18.76■□□□□ 0.59
RNF4-210ENST00000508235 RLBP1P12271 317 aa18.76■□□□□ 0.59
RNF4-210ENST00000508235 ATP2B4P23634 1241 aa18.76■□□□□ 0.59
RNF4-210ENST00000508235 DPY19L2Q6NUT2 758 aa18.76■□□□□ 0.59
RNF4-210ENST00000508235 LDHAL6AQ6ZMR3 332 aa18.76■□□□□ 0.59
RNF4-210ENST00000508235 SLC51AQ86UW1 340 aa18.76■□□□□ 0.59
RNF4-210ENST00000508235 CHMP4BQ9H444 224 aaKnown RBP18.76■□□□□ 0.59
RNF4-210ENST00000508235 LRRFIP2Q9Y608 721 aaKnown RBP18.76■□□□□ 0.59
RNF4-210ENST00000508235 DUOX1Q9NRD9 1551 aa18.76■□□□□ 0.59
RNF4-210ENST00000508235 GNAI2P04899 355 aa18.75■□□□□ 0.59
RNF4-210ENST00000508235 KIAA2012Q0VF49 1180 aa18.75■□□□□ 0.59
RNF4-210ENST00000508235 WASHC4Q2M389 1173 aa18.75■□□□□ 0.59
RNF4-210ENST00000508235 NIM1KQ8IY84 436 aa18.75■□□□□ 0.59
RNF4-210ENST00000508235 TBC1D16Q8TBP0 767 aa18.75■□□□□ 0.59
RNF4-210ENST00000508235 KDM2BQ8NHM5 1336 aa18.74■□□□□ 0.59
RNF4-210ENST00000508235 UFL1O94874 794 aa18.74■□□□□ 0.59
RNF4-210ENST00000508235 PDE3AQ14432 1141 aa18.74■□□□□ 0.59
RNF4-210ENST00000508235 AOC3Q16853 763 aa18.74■□□□□ 0.59
RNF4-210ENST00000508235 ZNF784Q8NCA9 323 aaPredicted RBP18.74■□□□□ 0.59
RNF4-210ENST00000508235 PANK1Q8TE04 598 aa18.74■□□□□ 0.59
RNF4-210ENST00000508235 CNNM1Q9NRU3 951 aa18.74■□□□□ 0.59
RNF4-210ENST00000508235 POLLQ9UGP5 575 aa18.74■□□□□ 0.59
RNF4-210ENST00000508235 LEMD3Q9Y2U8 911 aa18.74■□□□□ 0.59
RNF4-210ENST00000508235 PLIN1O60240 522 aa18.73■□□□□ 0.59
RNF4-210ENST00000508235 CHRNDQ07001 517 aa18.73■□□□□ 0.59
RNF4-210ENST00000508235 MVPQ14764 893 aaKnown RBP18.73■□□□□ 0.59
RNF4-210ENST00000508235 ZNF594Q96JF6 807 aaPredicted RBP18.73■□□□□ 0.59
RNF4-210ENST00000508235 ZC3H12CQ9C0D7 883 aaKnown RBP18.73■□□□□ 0.59
RNF4-210ENST00000508235 DDX19BQ9UMR2 479 aa18.73■□□□□ 0.59
RNF4-210ENST00000508235 GLTPD2A6NH11 291 aa18.72■□□□□ 0.59
RNF4-210ENST00000508235 ZBTB7BO15156 539 aaPredicted RBP18.72■□□□□ 0.59
RNF4-210ENST00000508235 EIF6P56537 245 aaKnown RBP18.72■□□□□ 0.59
RNF4-210ENST00000508235 GPBP1L1Q9HC44 474 aaPredicted RBP18.72■□□□□ 0.59
RNF4-210ENST00000508235 A0A1B0GUL6 1792 aa18.72■□□□□ 0.59
RNF4-210ENST00000508235 FZD9O00144 591 aa18.71■□□□□ 0.59
RNF4-210ENST00000508235 KCNJ4P48050 445 aa18.71■□□□□ 0.59
RNF4-210ENST00000508235 MTX1Q13505 466 aa18.71■□□□□ 0.59
RNF4-210ENST00000508235 FBXO3Q9UK99 471 aa18.71■□□□□ 0.59
RNF4-210ENST00000508235 ZNRF3Q9ULT6 936 aa18.71■□□□□ 0.59
RNF4-210ENST00000508235 MROH5Q6ZUA9 1318 aa18.71■□□□□ 0.59
RNF4-210ENST00000508235 G3V3G9 751 aa18.7■□□□□ 0.58
RNF4-210ENST00000508235 DCAF8Q5TAQ9 597 aa18.7■□□□□ 0.58
RNF4-210ENST00000508235 ZNF526Q8TF50 670 aaPredicted RBP18.7■□□□□ 0.58
RNF4-210ENST00000508235 ZNF804BA4D1E1 1349 aa18.7■□□□□ 0.58
RNF4-210ENST00000508235 MED23Q9ULK4 1368 aa18.69■□□□□ 0.58
RNF4-210ENST00000508235 SRGAP3O43295 1099 aa18.69■□□□□ 0.58
RNF4-210ENST00000508235 RFX5P48382 616 aaPredicted RBP18.69■□□□□ 0.58
RNF4-210ENST00000508235 COG6Q9Y2V7 657 aa18.69■□□□□ 0.58
RNF4-210ENST00000508235 UTRNP46939 3433 aa18.69■□□□□ 0.58
RNF4-210ENST00000508235 COL4A5P29400 1685 aa18.69■□□□□ 0.58
RNF4-210ENST00000508235 RIMBP2O15034 1052 aa18.68■□□□□ 0.58
RNF4-210ENST00000508235 RIPOR2Q9Y4F9 1068 aa18.68■□□□□ 0.58
RNF4-210ENST00000508235 WDR90Q96KV7 1748 aa18.67■□□□□ 0.58
RNF4-210ENST00000508235 EYA2O00167 538 aa18.67■□□□□ 0.58
RNF4-210ENST00000508235 CIAO1O76071 339 aa18.67■□□□□ 0.58
RNF4-210ENST00000508235 PTPN12Q05209 780 aaKnown RBP18.67■□□□□ 0.58
RNF4-210ENST00000508235 METTL24Q5JXM2 366 aa18.67■□□□□ 0.58
RNF4-210ENST00000508235 GPC2Q8N158 579 aa18.67■□□□□ 0.58
RNF4-210ENST00000508235 PUS3Q9BZE2 481 aaKnown RBP18.67■□□□□ 0.58
RNF4-210ENST00000508235 TAF5LO75529 589 aa18.66■□□□□ 0.58
RNF4-210ENST00000508235 RRP1P56182 461 aaKnown RBP18.66■□□□□ 0.58
RNF4-210ENST00000508235 UBE4AQ14139 1066 aa18.66■□□□□ 0.58
RNF4-210ENST00000508235 TNIP1Q15025 636 aa18.66■□□□□ 0.58
RNF4-210ENST00000508235 HELBQ8NG08 1087 aaPredicted RBP18.66■□□□□ 0.58
RNF4-210ENST00000508235 KLHDC4Q8TBB5 520 aa18.66■□□□□ 0.58
RNF4-210ENST00000508235 COPRSQ9NQ92 184 aa18.66■□□□□ 0.58
RNF4-210ENST00000508235 ZNF541Q9H0D2 1346 aa18.66■□□□□ 0.58
RNF4-210ENST00000508235 ECE2O60344 883 aa18.65■□□□□ 0.58
RNF4-210ENST00000508235 DDNO94850 711 aaPredicted RBP18.65■□□□□ 0.58
RNF4-210ENST00000508235 ATP8B2P98198 1209 aa18.65■□□□□ 0.58
RNF4-210ENST00000508235 LRRC24Q50LG9 513 aa18.65■□□□□ 0.58
RNF4-210ENST00000508235 C15orf52Q6ZUT6 534 aaKnown RBP18.65■□□□□ 0.58
RNF4-210ENST00000508235 GPR101Q96P66 508 aaPredicted RBP18.65■□□□□ 0.58
RNF4-210ENST00000508235 DBNDD1Q9H9R9 158 aa18.65■□□□□ 0.58
RNF4-210ENST00000508235 SCN4AP35499 1836 aa18.65■□□□□ 0.58
RNF4-210ENST00000508235 IQCA1LA6NCM1 817 aa18.64■□□□□ 0.57
RNF4-210ENST00000508235 PDE8BO95263 885 aa18.64■□□□□ 0.57
RNF4-210ENST00000508235 IL15P40933 162 aaPredicted RBP18.64■□□□□ 0.57
RNF4-210ENST00000508235 DOK7Q18PE1 504 aa18.64■□□□□ 0.57
RNF4-210ENST00000508235 C20orf194Q5TEA3 1177 aa18.64■□□□□ 0.57
RNF4-210ENST00000508235 CIAPIN1Q6FI81 312 aa18.64■□□□□ 0.57
RNF4-210ENST00000508235 PODNQ7Z5L7 613 aa18.64■□□□□ 0.57
RNF4-210ENST00000508235 COA1Q9GZY4 146 aa18.64■□□□□ 0.57
RNF4-210ENST00000508235 VEGFAP15692 232 aaPredicted RBP18.63■□□□□ 0.57
RNF4-210ENST00000508235 CXCL9Q07325 125 aa18.63■□□□□ 0.57
RNF4-210ENST00000508235 L3MBTL3Q96JM7 780 aaPredicted RBP18.63■□□□□ 0.57
RNF4-210ENST00000508235 SIL1Q9H173 461 aa18.63■□□□□ 0.57
RNF4-210ENST00000508235 C1orf115Q9H7X2 142 aa18.63■□□□□ 0.57
RNF4-210ENST00000508235 ZBTB40Q9NUA8 1239 aa18.63■□□□□ 0.57
RNF4-210ENST00000508235 GJA3Q9Y6H8 435 aa18.63■□□□□ 0.57
RNF4-210ENST00000508235 PSME4Q14997 1843 aa18.63■□□□□ 0.57
RNF4-210ENST00000508235 PNMA6EA0A0J9YXQ4 647 aa18.62■□□□□ 0.57
RNF4-210ENST00000508235 ZNF804AQ7Z570 1209 aa18.62■□□□□ 0.57
RNF4-210ENST00000508235 SSH3Q8TE77 659 aa18.62■□□□□ 0.57
RNF4-210ENST00000508235 RRAGCQ9HB90 399 aa18.62■□□□□ 0.57
RNF4-210ENST00000508235 NMRK2Q9NPI5 230 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms