RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 USP16Q9Y5T5 823 aa15.79■□□□□ 0.12
SNCAIP-209ENST00000508017 KIF13AQ9H1H9 1805 aa15.79■□□□□ 0.12
SNCAIP-209ENST00000508017 MYL6BP14649 208 aa15.78■□□□□ 0.12
SNCAIP-209ENST00000508017 SARM1Q6SZW1 724 aa15.78■□□□□ 0.12
SNCAIP-209ENST00000508017 ERCC4Q92889 916 aaPredicted RBP15.78■□□□□ 0.12
SNCAIP-209ENST00000508017 DNAJC2Q99543 621 aaKnown RBP15.78■□□□□ 0.12
SNCAIP-209ENST00000508017 FEZ1Q99689 392 aa15.78■□□□□ 0.12
SNCAIP-209ENST00000508017 CFAP45Q9UL16 551 aa15.78■□□□□ 0.12
SNCAIP-209ENST00000508017 SIPA1L3O60292 1781 aaPredicted RBP15.78■□□□□ 0.12
SNCAIP-209ENST00000508017 NEURL1BA8MQ27 555 aa15.78■□□□□ 0.12
SNCAIP-209ENST00000508017 TFCP2Q12800 502 aa15.78■□□□□ 0.12
SNCAIP-209ENST00000508017 ZSCAN16Q9H4T2 348 aaPredicted RBP15.78■□□□□ 0.12
SNCAIP-209ENST00000508017 OGFRQ9NZT2 677 aa15.78■□□□□ 0.12
SNCAIP-209ENST00000508017 CTDNEP1O95476 244 aa15.77■□□□□ 0.12
SNCAIP-209ENST00000508017 ATP5JP18859 108 aa15.77■□□□□ 0.12
SNCAIP-209ENST00000508017 STX1AQ16623 288 aa15.77■□□□□ 0.12
SNCAIP-209ENST00000508017 SLFNL1Q499Z3 407 aa15.77■□□□□ 0.12
SNCAIP-209ENST00000508017 AMOTQ4VCS5 1084 aa15.77■□□□□ 0.12
SNCAIP-209ENST00000508017 SMARCC2Q8TAQ2 1214 aa15.77■□□□□ 0.12
SNCAIP-209ENST00000508017 FBXW7Q969H0 707 aa15.77■□□□□ 0.12
SNCAIP-209ENST00000508017 NCAPD2Q15021 1401 aa15.77■□□□□ 0.11
SNCAIP-209ENST00000508017 SNW1Q13573 536 aaKnown RBP15.77■□□□□ 0.11
SNCAIP-209ENST00000508017 TNNI3KQ59H18 835 aa15.77■□□□□ 0.11
SNCAIP-209ENST00000508017 DDX46Q7L014 1031 aaKnown RBP15.77■□□□□ 0.11
SNCAIP-209ENST00000508017 FILIP1Q7Z7B0 1213 aa15.77■□□□□ 0.11
SNCAIP-209ENST00000508017 DHX40Q8IX18 779 aaKnown RBP15.77■□□□□ 0.11
SNCAIP-209ENST00000508017 NSUN7Q8NE18 718 aaKnown RBP15.77■□□□□ 0.11
SNCAIP-209ENST00000508017 MRFAP1L1Q96HT8 127 aa15.77■□□□□ 0.11
SNCAIP-209ENST00000508017 USP28Q96RU2 1077 aa15.77■□□□□ 0.11
SNCAIP-209ENST00000508017 MYD88Q99836 296 aa15.77■□□□□ 0.11
SNCAIP-209ENST00000508017 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.77■□□□□ 0.11
SNCAIP-209ENST00000508017 CCDC9Q9Y3X0 531 aaKnown RBP15.77■□□□□ 0.11
SNCAIP-209ENST00000508017 FPGT-TNNI3KV9GXZ4 949 aa15.77■□□□□ 0.11
SNCAIP-209ENST00000508017 V9GYY5 206 aaPredicted RBP15.77■□□□□ 0.11
SNCAIP-209ENST00000508017 C5P01031 1676 aa15.76■□□□□ 0.11
SNCAIP-209ENST00000508017 SKILP12757 684 aa15.76■□□□□ 0.11
SNCAIP-209ENST00000508017 FGD1P98174 961 aa15.76■□□□□ 0.11
SNCAIP-209ENST00000508017 SLC39A6Q13433 755 aa15.76■□□□□ 0.11
SNCAIP-209ENST00000508017 GCKRQ14397 625 aa15.76■□□□□ 0.11
SNCAIP-209ENST00000508017 TRMT1Q9NXH9 659 aaKnown RBP15.76■□□□□ 0.11
SNCAIP-209ENST00000508017 RCOR1Q9UKL0 485 aa15.76■□□□□ 0.11
SNCAIP-209ENST00000508017 U3KPZ7 1027 aaPredicted RBP15.76■□□□□ 0.11
SNCAIP-209ENST00000508017 CCDC69A6NI79 296 aa15.76■□□□□ 0.11
SNCAIP-209ENST00000508017 CAVIN2O95810 425 aa15.76■□□□□ 0.11
SNCAIP-209ENST00000508017 RBM6P78332 1123 aaKnown RBP15.76■□□□□ 0.11
SNCAIP-209ENST00000508017 CCZ1BP86790 482 aa15.76■□□□□ 0.11
SNCAIP-209ENST00000508017 CCZ1P86791 482 aaPredicted RBP15.76■□□□□ 0.11
SNCAIP-209ENST00000508017 APOBRQ0VD83 1088 aa15.76■□□□□ 0.11
SNCAIP-209ENST00000508017 DBNDD2Q9BQY9 259 aa15.76■□□□□ 0.11
SNCAIP-209ENST00000508017 CGNQ9P2M7 1197 aaKnown RBP15.76■□□□□ 0.11
SNCAIP-209ENST00000508017 A0A0G2JLW4 131 aa15.75■□□□□ 0.11
SNCAIP-209ENST00000508017 PTPDC1A2A3K4 754 aa15.75■□□□□ 0.11
SNCAIP-209ENST00000508017 CCT2P78371 535 aaKnown RBP15.75■□□□□ 0.11
SNCAIP-209ENST00000508017 GUCY1B3Q02153 619 aa15.75■□□□□ 0.11
SNCAIP-209ENST00000508017 XAGE3Q8WTP9 111 aa15.75■□□□□ 0.11
SNCAIP-209ENST00000508017 NCOA5Q9HCD5 579 aaKnown RBP15.75■□□□□ 0.11
SNCAIP-209ENST00000508017 DDX41Q9UJV9 622 aaKnown RBP15.75■□□□□ 0.11
SNCAIP-209ENST00000508017 ZNF215Q9UL58 517 aaPredicted RBP15.75■□□□□ 0.11
SNCAIP-209ENST00000508017 BECN2A8MW95 431 aa15.75■□□□□ 0.11
SNCAIP-209ENST00000508017 PFKFB2O60825 505 aa15.75■□□□□ 0.11
SNCAIP-209ENST00000508017 KIF20AO95235 890 aa15.75■□□□□ 0.11
SNCAIP-209ENST00000508017 RFX5P48382 616 aaPredicted RBP15.75■□□□□ 0.11
SNCAIP-209ENST00000508017 PIP4K2AP48426 406 aaPredicted RBP15.75■□□□□ 0.11
SNCAIP-209ENST00000508017 PTPN12Q05209 780 aaKnown RBP15.75■□□□□ 0.11
SNCAIP-209ENST00000508017 NYAP1Q6ZVC0 841 aa15.75■□□□□ 0.11
SNCAIP-209ENST00000508017 PTPN14Q15678 1187 aa15.74■□□□□ 0.11
SNCAIP-209ENST00000508017 MCMDC2Q4G0Z9 681 aa15.74■□□□□ 0.11
SNCAIP-209ENST00000508017 ENGASEQ8NFI3 743 aa15.74■□□□□ 0.11
SNCAIP-209ENST00000508017 OVOS2A0A0G2JMS6 1433 aa15.74■□□□□ 0.11
SNCAIP-209ENST00000508017 CTAGE5O15320 804 aa15.74■□□□□ 0.11
SNCAIP-209ENST00000508017 PSME1Q06323 249 aa15.74■□□□□ 0.11
SNCAIP-209ENST00000508017 NEXNQ0ZGT2 675 aa15.74■□□□□ 0.11
SNCAIP-209ENST00000508017 NAA16Q6N069 864 aaPredicted RBP15.74■□□□□ 0.11
SNCAIP-209ENST00000508017 CCDC73Q6ZRK6 1079 aa15.74■□□□□ 0.11
SNCAIP-209ENST00000508017 COPS6Q7L5N1 327 aa15.74■□□□□ 0.11
SNCAIP-209ENST00000508017 ILDR1Q86SU0 546 aaPredicted RBP15.74■□□□□ 0.11
SNCAIP-209ENST00000508017 AOPEPQ8N6M6 819 aa15.74■□□□□ 0.11
SNCAIP-209ENST00000508017 COPRSQ9NQ92 184 aa15.74■□□□□ 0.11
SNCAIP-209ENST00000508017 KINO60870 393 aaKnown RBP15.73■□□□□ 0.11
SNCAIP-209ENST00000508017 FSIP1Q8NA03 581 aa15.73■□□□□ 0.11
SNCAIP-209ENST00000508017 KCNH5Q8NCM2 988 aa15.73■□□□□ 0.11
SNCAIP-209ENST00000508017 KIF18AQ8NI77 898 aa15.73■□□□□ 0.11
SNCAIP-209ENST00000508017 ANKRD24Q8TF21 1146 aa15.73■□□□□ 0.11
SNCAIP-209ENST00000508017 PHRF1Q9P1Y6 1649 aaKnown RBP15.73■□□□□ 0.11
SNCAIP-209ENST00000508017 LLPHQ9BRT6 129 aaKnown RBP15.73■□□□□ 0.11
SNCAIP-209ENST00000508017 NAP1L2Q9ULW6 460 aaPredicted RBP15.73■□□□□ 0.11
SNCAIP-209ENST00000508017 NEMFO60524 1076 aa15.72■□□□□ 0.11
SNCAIP-209ENST00000508017 ME1P48163 572 aa15.72■□□□□ 0.11
SNCAIP-209ENST00000508017 FAM160A1Q05DH4 1040 aa15.72■□□□□ 0.11
SNCAIP-209ENST00000508017 KMT5BQ4FZB7 885 aa15.72■□□□□ 0.11
SNCAIP-209ENST00000508017 ESCO1Q5FWF5 840 aa15.72■□□□□ 0.11
SNCAIP-209ENST00000508017 THEMISQ8N1K5 641 aaPredicted RBP15.72■□□□□ 0.11
SNCAIP-209ENST00000508017 HAUS7Q99871 368 aa15.72■□□□□ 0.11
SNCAIP-209ENST00000508017 METTL22Q9BUU2 404 aaPredicted RBP15.72■□□□□ 0.11
SNCAIP-209ENST00000508017 DHX32Q7L7V1 743 aaKnown RBP15.72■□□□□ 0.11
SNCAIP-209ENST00000508017 CHST3Q7LGC8 479 aa15.72■□□□□ 0.11
SNCAIP-209ENST00000508017 UBE3BQ7Z3V4 1068 aa15.72■□□□□ 0.11
SNCAIP-209ENST00000508017 CCAR2Q8N163 923 aaKnown RBP15.72■□□□□ 0.11
SNCAIP-209ENST00000508017 ANO10Q9NW15 660 aa15.72■□□□□ 0.11
SNCAIP-209ENST00000508017 ERBB3P21860 1342 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms