RNA–Protein interactions for RNA: ENST00000508006.1

SNCB-204, Transcript of synuclein beta, humanhuman

TSL 2

Gene SNCB, Length 969 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-204ENST00000508006 GJA3Q9Y6H8 435 aa28.08■■■□□ 2.09
SNCB-204ENST00000508006 HOXA10P31260 410 aaPredicted RBP28.07■■■□□ 2.08
SNCB-204ENST00000508006 MAP1SQ66K74 1059 aaPredicted RBP28.07■■■□□ 2.08
SNCB-204ENST00000508006 ITPRIPQ8IWB1 547 aa28.07■■■□□ 2.08
SNCB-204ENST00000508006 PANK1Q8TE04 598 aa28.07■■■□□ 2.08
SNCB-204ENST00000508006 CENPBP07199 599 aaPredicted RBP28.06■■■□□ 2.08
SNCB-204ENST00000508006 UBTFL1P0CB47 393 aaPredicted RBP28.06■■■□□ 2.08
SNCB-204ENST00000508006 MVPQ14764 893 aaKnown RBP28.06■■■□□ 2.08
SNCB-204ENST00000508006 JARID2Q92833 1246 aaPredicted RBP28.06■■■□□ 2.08
SNCB-204ENST00000508006 LMOD1P29536 600 aaPredicted RBP28.05■■■□□ 2.08
SNCB-204ENST00000508006 CTCFP49711 727 aaPredicted RBP28.05■■■□□ 2.08
SNCB-204ENST00000508006 CTSWP56202 376 aa28.05■■■□□ 2.08
SNCB-204ENST00000508006 DEFB115Q30KQ5 88 aa28.05■■■□□ 2.08
SNCB-204ENST00000508006 CCDC152Q4G0S7 254 aa28.05■■■□□ 2.08
SNCB-204ENST00000508006 DDX19BQ9UMR2 479 aa28.05■■■□□ 2.08
SNCB-204ENST00000508006 RTL9Q8NET4 1388 aa28.04■■■□□ 2.08
SNCB-204ENST00000508006 GRIPAP1Q4V328 841 aa28.04■■■□□ 2.08
SNCB-204ENST00000508006 RBM17Q96I25 401 aaKnown RBP28.04■■■□□ 2.08
SNCB-204ENST00000508006 PRDM10Q9NQV6 1147 aa28.04■■■□□ 2.08
SNCB-204ENST00000508006 CSF1RP07333 972 aa28.03■■■□□ 2.08
SNCB-204ENST00000508006 TTLL11Q8NHH1 800 aa28.03■■■□□ 2.08
SNCB-204ENST00000508006 CRAMP1Q96RY5 1269 aa28.03■■■□□ 2.08
SNCB-204ENST00000508006 MEIS3Q99687 375 aa28.03■■■□□ 2.08
SNCB-204ENST00000508006 TMX4Q9H1E5 349 aaPredicted RBP28.03■■■□□ 2.08
SNCB-204ENST00000508006 ZBTB7BO15156 539 aaPredicted RBP28.02■■■□□ 2.08
SNCB-204ENST00000508006 FOXO4P98177 505 aa28.02■■■□□ 2.08
SNCB-204ENST00000508006 C3orf67Q6ZVT6 689 aa28.02■■■□□ 2.08
SNCB-204ENST00000508006 LARGE2Q8N3Y3 721 aa28.02■■■□□ 2.08
SNCB-204ENST00000508006 ABT1Q9ULW3 272 aaKnown RBP28.02■■■□□ 2.08
SNCB-204ENST00000508006 SUPT16HQ9Y5B9 1047 aaKnown RBP28.02■■■□□ 2.08
SNCB-204ENST00000508006 DDX46Q7L014 1031 aaKnown RBP28.01■■■□□ 2.07
SNCB-204ENST00000508006 SUCLG2Q96I99 432 aa28.01■■■□□ 2.07
SNCB-204ENST00000508006 RABL6Q3YEC7 729 aaPredicted RBP28■■■□□ 2.07
SNCB-204ENST00000508006 C20orf194Q5TEA3 1177 aa28■■■□□ 2.07
SNCB-204ENST00000508006 KAZALD1Q96I82 304 aa28■■■□□ 2.07
SNCB-204ENST00000508006 COG6Q9Y2V7 657 aa28■■■□□ 2.07
SNCB-204ENST00000508006 PPEF1O14829 653 aaPredicted RBP27.98■■■□□ 2.07
SNCB-204ENST00000508006 GNAI2P04899 355 aa27.98■■■□□ 2.07
SNCB-204ENST00000508006 WBP1LQ9NX94 342 aa27.98■■■□□ 2.07
SNCB-204ENST00000508006 RASSF10A6NK89 507 aa27.97■■■□□ 2.07
SNCB-204ENST00000508006 LBX1P52954 281 aa27.97■■■□□ 2.07
SNCB-204ENST00000508006 TMC4Q7Z404 712 aa27.97■■■□□ 2.07
SNCB-204ENST00000508006 BICC1Q9H694 974 aaKnown RBP27.97■■■□□ 2.07
SNCB-204ENST00000508006 BBOX1O75936 387 aa27.96■■■□□ 2.07
SNCB-204ENST00000508006 EPHA10Q5JZY3 1008 aa27.96■■■□□ 2.07
SNCB-204ENST00000508006 LMBR1LQ6UX01 489 aa27.96■■■□□ 2.07
SNCB-204ENST00000508006 NIM1KQ8IY84 436 aa27.96■■■□□ 2.07
SNCB-204ENST00000508006 WDR33Q9C0J8 1336 aaKnown RBP27.95■■■□□ 2.07
SNCB-204ENST00000508006 MAP2K1Q02750 393 aaPredicted RBP27.95■■■□□ 2.06
SNCB-204ENST00000508006 GRAPQ13588 217 aa27.95■■■□□ 2.06
SNCB-204ENST00000508006 PAXIP1Q6ZW49 1069 aaPredicted RBP27.95■■■□□ 2.06
SNCB-204ENST00000508006 GRAPLQ8TC17 118 aaPredicted RBP27.95■■■□□ 2.06
SNCB-204ENST00000508006 LRRFIP2Q9Y608 721 aaKnown RBP27.95■■■□□ 2.06
SNCB-204ENST00000508006 ADAMTSL1Q8N6G6 1762 aa27.95■■■□□ 2.06
SNCB-204ENST00000508006 TAF1P21675 1872 aa27.94■■■□□ 2.06
SNCB-204ENST00000508006 EPS15P42566 896 aa27.94■■■□□ 2.06
SNCB-204ENST00000508006 ANKRD44Q8N8A2 993 aa27.94■■■□□ 2.06
SNCB-204ENST00000508006 CDC5LQ99459 802 aaKnown RBP27.94■■■□□ 2.06
SNCB-204ENST00000508006 GREM2Q9H772 168 aa27.94■■■□□ 2.06
SNCB-204ENST00000508006 PPIP5K2O43314 1243 aa27.93■■■□□ 2.06
SNCB-204ENST00000508006 IFIT5Q13325 482 aaKnown RBP27.93■■■□□ 2.06
SNCB-204ENST00000508006 ZBTB40Q9NUA8 1239 aa27.93■■■□□ 2.06
SNCB-204ENST00000508006 SNED1Q8TER0 1413 aa27.92■■■□□ 2.06
SNCB-204ENST00000508006 ANKRD18BA2A2Z9 1011 aa27.92■■■□□ 2.06
SNCB-204ENST00000508006 ITGA6P23229 1130 aa27.92■■■□□ 2.06
SNCB-204ENST00000508006 SCNN1DP51172 638 aa27.92■■■□□ 2.06
SNCB-204ENST00000508006 MTX1Q13505 466 aa27.92■■■□□ 2.06
SNCB-204ENST00000508006 CCDC57Q2TAC2 916 aa27.92■■■□□ 2.06
SNCB-204ENST00000508006 USP50Q70EL3 339 aaPredicted RBP27.92■■■□□ 2.06
SNCB-204ENST00000508006 RPS8P62241 208 aaKnown RBP27.91■■■□□ 2.06
SNCB-204ENST00000508006 AAMPQ13685 434 aa27.91■■■□□ 2.06
SNCB-204ENST00000508006 FAM161AQ3B820 660 aa27.91■■■□□ 2.06
SNCB-204ENST00000508006 LRRC37AA6NMS7 1700 aa27.9■■■□□ 2.06
SNCB-204ENST00000508006 GRM1Q13255 1194 aa27.9■■■□□ 2.06
SNCB-204ENST00000508006 ANKRD18AQ8IVF6 992 aa27.9■■■□□ 2.06
SNCB-204ENST00000508006 BEGAINQ9BUH8 593 aa27.9■■■□□ 2.06
SNCB-204ENST00000508006 CHMP3Q9Y3E7 222 aa27.9■■■□□ 2.06
SNCB-204ENST00000508006 ECE1P42892 770 aa27.89■■■□□ 2.06
SNCB-204ENST00000508006 AOC3Q16853 763 aa27.89■■■□□ 2.06
SNCB-204ENST00000508006 SUPT20HQ8NEM7 779 aa27.89■■■□□ 2.06
SNCB-204ENST00000508006 CCDC85AQ96PX6 553 aaPredicted RBP27.89■■■□□ 2.06
SNCB-204ENST00000508006 VPS33BQ9H267 617 aa27.89■■■□□ 2.06
SNCB-204ENST00000508006 SEC31BQ9NQW1 1179 aa27.89■■■□□ 2.06
SNCB-204ENST00000508006 COL4A5P29400 1685 aa27.88■■■□□ 2.05
SNCB-204ENST00000508006 SPEF2Q9C093 1822 aa27.88■■■□□ 2.05
SNCB-204ENST00000508006 CELF1Q92879 486 aaKnown RBP27.88■■■□□ 2.05
SNCB-204ENST00000508006 ATP6V0A2Q9Y487 856 aa27.88■■■□□ 2.05
SNCB-204ENST00000508006 IGHMBP2P38935 993 aaKnown RBP27.87■■■□□ 2.05
SNCB-204ENST00000508006 FMR1Q06787 632 aaKnown RBP eCLIP27.87■■■□□ 2.05
SNCB-204ENST00000508006 SP8Q8IXZ3 490 aa27.87■■■□□ 2.05
SNCB-204ENST00000508006 HSPA8P11142 646 aaKnown RBP27.86■■■□□ 2.05
SNCB-204ENST00000508006 SLC51AQ86UW1 340 aa27.86■■■□□ 2.05
SNCB-204ENST00000508006 CAPNS2Q96L46 248 aa27.86■■■□□ 2.05
SNCB-204ENST00000508006 BSDC1Q9NW68 430 aaPredicted RBP27.86■■■□□ 2.05
SNCB-204ENST00000508006 ADARB2Q9NS39 739 aaKnown RBP27.85■■■□□ 2.05
SNCB-204ENST00000508006 ZNRF3Q9ULT6 936 aa27.85■■■□□ 2.05
SNCB-204ENST00000508006 COL4A1P02462 1669 aa27.84■■■□□ 2.05
SNCB-204ENST00000508006 LTBP1Q14766 1721 aa27.84■■■□□ 2.05
SNCB-204ENST00000508006 TRAF5O00463 557 aa27.84■■■□□ 2.05
SNCB-204ENST00000508006 ATP8B2P98198 1209 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms