RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 OS9Q13438 667 aaPredicted RBP24.88■■□□□ 1.57
USP53-203ENST00000507597 C7orf43Q8WVR3 580 aa24.88■■□□□ 1.57
USP53-203ENST00000507597 RWDD1Q9H446 243 aaPredicted RBP24.88■■□□□ 1.57
USP53-203ENST00000507597 WWC3Q9ULE0 1092 aa24.88■■□□□ 1.57
USP53-203ENST00000507597 SURF6O75683 361 aaKnown RBP24.87■■□□□ 1.57
USP53-203ENST00000507597 DPP8Q6V1X1 898 aaPredicted RBP24.87■■□□□ 1.57
USP53-203ENST00000507597 ERC1Q8IUD2 1116 aa24.87■■□□□ 1.57
USP53-203ENST00000507597 MINPP1Q9UNW1 487 aa24.87■■□□□ 1.57
USP53-203ENST00000507597 NSFL1CQ9UNZ2 370 aaKnown RBP24.87■■□□□ 1.57
USP53-203ENST00000507597 XDHP47989 1333 aa24.86■■□□□ 1.57
USP53-203ENST00000507597 METTL24Q5JXM2 366 aa24.86■■□□□ 1.57
USP53-203ENST00000507597 CEP126Q9P2H0 1117 aa24.86■■□□□ 1.57
USP53-203ENST00000507597 LEMD3Q9Y2U8 911 aa24.86■■□□□ 1.57
USP53-203ENST00000507597 ATP2B4P23634 1241 aa24.85■■□□□ 1.57
USP53-203ENST00000507597 KCNJ4P48050 445 aa24.85■■□□□ 1.57
USP53-203ENST00000507597 ARHGAP27Q6ZUM4 889 aa24.85■■□□□ 1.57
USP53-203ENST00000507597 EYA3Q99504 573 aa24.85■■□□□ 1.57
USP53-203ENST00000507597 SIL1Q9H173 461 aa24.85■■□□□ 1.57
USP53-203ENST00000507597 VPS33BQ9H267 617 aa24.85■■□□□ 1.57
USP53-203ENST00000507597 PODXL2Q9NZ53 605 aa24.85■■□□□ 1.57
USP53-203ENST00000507597 NOP58Q9Y2X3 529 aaKnown RBP24.85■■□□□ 1.57
USP53-203ENST00000507597 RIPOR2Q9Y4F9 1068 aa24.85■■□□□ 1.57
USP53-203ENST00000507597 RAB11FIP3O75154 756 aa24.84■■□□□ 1.57
USP53-203ENST00000507597 CHRNDQ07001 517 aa24.84■■□□□ 1.57
USP53-203ENST00000507597 KLHDC4Q8TBB5 520 aa24.84■■□□□ 1.57
USP53-203ENST00000507597 PSMD1Q99460 953 aa24.84■■□□□ 1.57
USP53-203ENST00000507597 GGA1Q9UJY5 639 aa24.84■■□□□ 1.57
USP53-203ENST00000507597 PA2G4Q9UQ80 394 aaKnown RBP24.84■■□□□ 1.57
USP53-203ENST00000507597 BRCA1P38398 1863 aaKnown RBP24.83■■□□□ 1.57
USP53-203ENST00000507597 FKBP4Q02790 459 aaKnown RBP eCLIP24.83■■□□□ 1.57
USP53-203ENST00000507597 ZBTB47Q9UFB7 747 aaPredicted RBP24.83■■□□□ 1.57
USP53-203ENST00000507597 AKAP2Q9Y2D5 859 aa24.83■■□□□ 1.57
USP53-203ENST00000507597 PCDHB15Q9Y5E8 787 aa24.83■■□□□ 1.57
USP53-203ENST00000507597 SLX4Q8IY92 1834 aa24.83■■□□□ 1.57
USP53-203ENST00000507597 HDAC1Q13547 482 aaPredicted RBP24.82■■□□□ 1.56
USP53-203ENST00000507597 LRRC24Q50LG9 513 aa24.82■■□□□ 1.56
USP53-203ENST00000507597 PUS3Q9BZE2 481 aaKnown RBP24.82■■□□□ 1.56
USP53-203ENST00000507597 TAOK3Q9H2K8 898 aa24.82■■□□□ 1.56
USP53-203ENST00000507597 C6orf229H3BNL8 230 aa24.81■■□□□ 1.56
USP53-203ENST00000507597 UBE4AQ14139 1066 aa24.81■■□□□ 1.56
USP53-203ENST00000507597 SIRT2Q8IXJ6 389 aa24.81■■□□□ 1.56
USP53-203ENST00000507597 LTBP3Q9NS15 1303 aa24.81■■□□□ 1.56
USP53-203ENST00000507597 PDE8BO95263 885 aa24.8■■□□□ 1.56
USP53-203ENST00000507597 YBX3P16989 372 aaKnown RBP eCLIP24.8■■□□□ 1.56
USP53-203ENST00000507597 GPSM2P81274 684 aa24.8■■□□□ 1.56
USP53-203ENST00000507597 RTFDC1Q9BY42 306 aaPredicted RBP24.8■■□□□ 1.56
USP53-203ENST00000507597 ARFGEF1Q9Y6D6 1849 aa24.79■■□□□ 1.56
USP53-203ENST00000507597 UFL1O94874 794 aa24.79■■□□□ 1.56
USP53-203ENST00000507597 ATG9AQ7Z3C6 839 aa24.79■■□□□ 1.56
USP53-203ENST00000507597 GCC1Q96CN9 775 aa24.79■■□□□ 1.56
USP53-203ENST00000507597 ZC3H12CQ9C0D7 883 aaKnown RBP24.79■■□□□ 1.56
USP53-203ENST00000507597 CACNA1SQ13698 1873 aa24.79■■□□□ 1.56
USP53-203ENST00000507597 G3V3G9 751 aa24.78■■□□□ 1.56
USP53-203ENST00000507597 DCAF8Q5TAQ9 597 aa24.78■■□□□ 1.56
USP53-203ENST00000507597 KIF1BPQ96EK5 621 aa24.78■■□□□ 1.56
USP53-203ENST00000507597 DCTPP1Q9H773 170 aa24.78■■□□□ 1.56
USP53-203ENST00000507597 ZNF804BA4D1E1 1349 aa24.78■■□□□ 1.56
USP53-203ENST00000507597 IFIT1P09914 478 aaKnown RBP24.77■■□□□ 1.56
USP53-203ENST00000507597 PUM3Q15397 648 aaKnown RBP24.77■■□□□ 1.56
USP53-203ENST00000507597 WASHC4Q2M389 1173 aa24.77■■□□□ 1.56
USP53-203ENST00000507597 TBC1D16Q8TBP0 767 aa24.77■■□□□ 1.56
USP53-203ENST00000507597 EXOC6BQ9Y2D4 811 aa24.77■■□□□ 1.56
USP53-203ENST00000507597 TAF1P21675 1872 aa24.77■■□□□ 1.56
USP53-203ENST00000507597 TAF5LO75529 589 aa24.76■■□□□ 1.55
USP53-203ENST00000507597 OLFM4Q6UX06 510 aa24.76■■□□□ 1.55
USP53-203ENST00000507597 HELBQ8NG08 1087 aaPredicted RBP24.76■■□□□ 1.55
USP53-203ENST00000507597 LPIN2Q92539 896 aa24.76■■□□□ 1.55
USP53-203ENST00000507597 GPR108Q9NPR9 543 aa24.76■■□□□ 1.55
USP53-203ENST00000507597 SLC5A1P13866 664 aa24.75■■□□□ 1.55
USP53-203ENST00000507597 LMNB1P20700 586 aa24.74■■□□□ 1.55
USP53-203ENST00000507597 CAVIN4Q5BKX8 364 aa24.74■■□□□ 1.55
USP53-203ENST00000507597 CLASRPQ8N2M8 674 aaKnown RBP24.74■■□□□ 1.55
USP53-203ENST00000507597 JDP2Q8WYK2 163 aa24.74■■□□□ 1.55
USP53-203ENST00000507597 LRRC37AA6NMS7 1700 aa24.74■■□□□ 1.55
USP53-203ENST00000507597 IARSP41252 1262 aaKnown RBP24.73■■□□□ 1.55
USP53-203ENST00000507597 TFCP2Q12800 502 aa24.73■■□□□ 1.55
USP53-203ENST00000507597 ATP2B3Q16720 1220 aa24.73■■□□□ 1.55
USP53-203ENST00000507597 LRRCC1Q9C099 1032 aa24.73■■□□□ 1.55
USP53-203ENST00000507597 POLLQ9UGP5 575 aa24.73■■□□□ 1.55
USP53-203ENST00000507597 NFKBIEO00221 500 aa24.72■■□□□ 1.55
USP53-203ENST00000507597 PPIP5K2O43314 1243 aa24.72■■□□□ 1.55
USP53-203ENST00000507597 C15orf52Q6ZUT6 534 aaKnown RBP24.72■■□□□ 1.55
USP53-203ENST00000507597 VPS37DQ86XT2 251 aa24.72■■□□□ 1.55
USP53-203ENST00000507597 LARGE2Q8N3Y3 721 aa24.72■■□□□ 1.55
USP53-203ENST00000507597 VGLL2Q8N8G2 317 aa24.72■■□□□ 1.55
USP53-203ENST00000507597 RHPN1Q8TCX5 695 aa24.72■■□□□ 1.55
USP53-203ENST00000507597 SPEF2Q9C093 1822 aa24.72■■□□□ 1.55
USP53-203ENST00000507597 MED23Q9ULK4 1368 aa24.71■■□□□ 1.55
USP53-203ENST00000507597 SASH1O94885 1247 aa24.71■■□□□ 1.55
USP53-203ENST00000507597 KIAA2012Q0VF49 1180 aa24.71■■□□□ 1.55
USP53-203ENST00000507597 ZNF804AQ7Z570 1209 aa24.7■■□□□ 1.54
USP53-203ENST00000507597 CCDC136Q96JN2 1154 aa24.7■■□□□ 1.54
USP53-203ENST00000507597 NEUROD6Q96NK8 337 aa24.7■■□□□ 1.54
USP53-203ENST00000507597 ZNF277Q9NRM2 450 aaPredicted RBP24.7■■□□□ 1.54
USP53-203ENST00000507597 SNED1Q8TER0 1413 aa24.69■■□□□ 1.54
USP53-203ENST00000507597 COL4A1P02462 1669 aa24.69■■□□□ 1.54
USP53-203ENST00000507597 APBB1O00213 710 aa24.69■■□□□ 1.54
USP53-203ENST00000507597 GORABQ5T7V8 394 aa24.69■■□□□ 1.54
USP53-203ENST00000507597 NIM1KQ8IY84 436 aa24.69■■□□□ 1.54
USP53-203ENST00000507597 GNL3LQ9NVN8 582 aaKnown RBP24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms