RNA–Protein interactions for RNA: ENST00000507550.5

CASP6-206, Transcript of caspase 6, humanhuman

TSL 2

Gene CASP6, Length 892 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6-206ENST00000507550 AKAP11Q9UKA4 1901 aa17.15■□□□□ 0.34
CASP6-206ENST00000507550 LAMB2P55268 1798 aa17.15■□□□□ 0.34
CASP6-206ENST00000507550 EIF2S2P20042 333 aaKnown RBP17.15■□□□□ 0.34
CASP6-206ENST00000507550 PPP2R1AP30153 589 aa17.15■□□□□ 0.34
CASP6-206ENST00000507550 TMC4Q7Z404 712 aa17.15■□□□□ 0.34
CASP6-206ENST00000507550 GCC1Q96CN9 775 aa17.15■□□□□ 0.34
CASP6-206ENST00000507550 SH3TC1Q8TE82 1336 aa17.15■□□□□ 0.34
CASP6-206ENST00000507550 C6orf229H3BNL8 230 aa17.14■□□□□ 0.33
CASP6-206ENST00000507550 GPSM2P81274 684 aa17.14■□□□□ 0.33
CASP6-206ENST00000507550 HABP4Q5JVS0 413 aaKnown RBP17.14■□□□□ 0.33
CASP6-206ENST00000507550 CELF1Q92879 486 aaKnown RBP17.14■□□□□ 0.33
CASP6-206ENST00000507550 POLR2AP24928 1970 aaKnown RBP17.14■□□□□ 0.33
CASP6-206ENST00000507550 ANKRD36CQ5JPF3 1778 aa17.14■□□□□ 0.33
CASP6-206ENST00000507550 LRRC37AA6NMS7 1700 aa17.13■□□□□ 0.33
CASP6-206ENST00000507550 ANGEL2Q5VTE6 544 aaKnown RBP17.13■□□□□ 0.33
CASP6-206ENST00000507550 MOB2Q70IA6 237 aa17.13■□□□□ 0.33
CASP6-206ENST00000507550 TAF1P21675 1872 aa17.13■□□□□ 0.33
CASP6-206ENST00000507550 VIL1P09327 827 aaKnown RBP17.12■□□□□ 0.33
CASP6-206ENST00000507550 AIMP1Q12904 312 aaKnown RBP17.12■□□□□ 0.33
CASP6-206ENST00000507550 TCIRG1Q13488 830 aa17.12■□□□□ 0.33
CASP6-206ENST00000507550 HSP90AB3PQ58FF7 597 aa17.12■□□□□ 0.33
CASP6-206ENST00000507550 FBXO46Q6PJ61 603 aaPredicted RBP17.12■□□□□ 0.33
CASP6-206ENST00000507550 COPS6Q7L5N1 327 aa17.12■□□□□ 0.33
CASP6-206ENST00000507550 GPR25O00155 361 aa17.11■□□□□ 0.33
CASP6-206ENST00000507550 FKBP1BP68106 108 aa17.11■□□□□ 0.33
CASP6-206ENST00000507550 SCARF1Q14162 830 aa17.11■□□□□ 0.33
CASP6-206ENST00000507550 XAGE3Q8WTP9 111 aa17.11■□□□□ 0.33
CASP6-206ENST00000507550 SCAF8Q9UPN6 1271 aaKnown RBP17.11■□□□□ 0.33
CASP6-206ENST00000507550 COL4A1P02462 1669 aa17.1■□□□□ 0.33
CASP6-206ENST00000507550 TBC1D16Q8TBP0 767 aa17.1■□□□□ 0.33
CASP6-206ENST00000507550 PLEKHF1Q96S99 279 aa17.1■□□□□ 0.33
CASP6-206ENST00000507550 EYA3Q99504 573 aa17.1■□□□□ 0.33
CASP6-206ENST00000507550 TSPYL4Q9UJ04 414 aa17.1■□□□□ 0.33
CASP6-206ENST00000507550 UBE2Q2LH0YL09 131 aa17.09■□□□□ 0.33
CASP6-206ENST00000507550 NEFMP07197 916 aa17.09■□□□□ 0.33
CASP6-206ENST00000507550 ZNF280AP59817 542 aaPredicted RBP17.09■□□□□ 0.33
CASP6-206ENST00000507550 NFE2L2Q16236 605 aa17.09■□□□□ 0.33
CASP6-206ENST00000507550 NECTIN2Q92692 538 aa17.09■□□□□ 0.33
CASP6-206ENST00000507550 PAPPA2Q9BXP8 1791 aa17.09■□□□□ 0.33
CASP6-206ENST00000507550 SF3B3Q15393 1217 aaKnown RBP17.08■□□□□ 0.32
CASP6-206ENST00000507550 NOM1Q5C9Z4 860 aaKnown RBP17.08■□□□□ 0.32
CASP6-206ENST00000507550 PRAMEF18Q5VWM3 479 aa17.08■□□□□ 0.32
CASP6-206ENST00000507550 HTTP42858 3142 aa17.08■□□□□ 0.32
CASP6-206ENST00000507550 TM4SF4P48230 202 aa17.07■□□□□ 0.32
CASP6-206ENST00000507550 MKRN3Q13064 507 aaKnown RBP17.07■□□□□ 0.32
CASP6-206ENST00000507550 FAM89AQ96GI7 184 aa17.07■□□□□ 0.32
CASP6-206ENST00000507550 ZC3H12CQ9C0D7 883 aaKnown RBP17.07■□□□□ 0.32
CASP6-206ENST00000507550 R3HDMLQ9H3Y0 253 aa17.07■□□□□ 0.32
CASP6-206ENST00000507550 DLG5Q8TDM6 1919 aa17.07■□□□□ 0.32
CASP6-206ENST00000507550 SCN9AQ15858 1988 aa17.06■□□□□ 0.32
CASP6-206ENST00000507550 RSBN1LQ6PCB5 846 aaPredicted RBP17.06■□□□□ 0.32
CASP6-206ENST00000507550 AGBL3Q8NEM8 1001 aa17.06■□□□□ 0.32
CASP6-206ENST00000507550 PITPNM2Q9BZ72 1349 aa17.05■□□□□ 0.32
CASP6-206ENST00000507550 POTEFA5A3E0 1075 aa17.05■□□□□ 0.32
CASP6-206ENST00000507550 FKTNO75072 461 aa17.05■□□□□ 0.32
CASP6-206ENST00000507550 RTL5Q5HYW3 569 aaPredicted RBP17.05■□□□□ 0.32
CASP6-206ENST00000507550 MYOZ2Q9NPC6 264 aa17.05■□□□□ 0.32
CASP6-206ENST00000507550 ZNF609O15014 1411 aa17.04■□□□□ 0.32
CASP6-206ENST00000507550 G3V3G9 751 aa17.04■□□□□ 0.32
CASP6-206ENST00000507550 UFL1O94874 794 aa17.04■□□□□ 0.32
CASP6-206ENST00000507550 RPS8P62241 208 aaKnown RBP17.04■□□□□ 0.32
CASP6-206ENST00000507550 DCAF8Q5TAQ9 597 aa17.04■□□□□ 0.32
CASP6-206ENST00000507550 GMLQ99445 158 aa17.04■□□□□ 0.32
CASP6-206ENST00000507550 PODXL2Q9NZ53 605 aa17.04■□□□□ 0.32
CASP6-206ENST00000507550 DDX60Q8IY21 1712 aaKnown RBP17.04■□□□□ 0.32
CASP6-206ENST00000507550 CENPFP49454 3210 aa17.04■□□□□ 0.32
CASP6-206ENST00000507550 BRCA2P51587 3418 aa17.03■□□□□ 0.32
CASP6-206ENST00000507550 USP17L8P0C7I0 530 aa17.03■□□□□ 0.32
CASP6-206ENST00000507550 FXR1P51114 621 aaKnown RBP eCLIP17.03■□□□□ 0.32
CASP6-206ENST00000507550 TTLL12Q14166 644 aaPredicted RBP17.03■□□□□ 0.32
CASP6-206ENST00000507550 CFHR5Q9BXR6 569 aa17.03■□□□□ 0.32
CASP6-206ENST00000507550 ATP5J2-PTCD1G3V325 749 aa17.02■□□□□ 0.32
CASP6-206ENST00000507550 ISCA1Q9BUE6 129 aa17.02■□□□□ 0.32
CASP6-206ENST00000507550 ANKIB1Q9P2G1 1089 aa17.02■□□□□ 0.32
CASP6-206ENST00000507550 SREBF2Q12772 1141 aa17.01■□□□□ 0.31
CASP6-206ENST00000507550 KRT24Q2M2I5 525 aa17.01■□□□□ 0.31
CASP6-206ENST00000507550 NBPF9Q3BBW0 867 aa17.01■□□□□ 0.31
CASP6-206ENST00000507550 CCER1Q8TC90 406 aaPredicted RBP17.01■□□□□ 0.31
CASP6-206ENST00000507550 SEC31BQ9NQW1 1179 aa17.01■□□□□ 0.31
CASP6-206ENST00000507550 GGA1Q9UJY5 639 aa17.01■□□□□ 0.31
CASP6-206ENST00000507550 IRS4O14654 1257 aaPredicted RBP17■□□□□ 0.31
CASP6-206ENST00000507550 PLBD2Q8NHP8 589 aa17■□□□□ 0.31
CASP6-206ENST00000507550 CHPF2Q9P2E5 772 aa17■□□□□ 0.31
CASP6-206ENST00000507550 TRIM17Q9Y577 477 aa17■□□□□ 0.31
CASP6-206ENST00000507550 MAPK8IP3Q9UPT6 1336 aa16.99■□□□□ 0.31
CASP6-206ENST00000507550 PTPN12Q05209 780 aaKnown RBP16.99■□□□□ 0.31
CASP6-206ENST00000507550 ANKRD13DQ6ZTN6 518 aa16.99■□□□□ 0.31
CASP6-206ENST00000507550 OTOP1Q7RTM1 612 aa16.99■□□□□ 0.31
CASP6-206ENST00000507550 USP17L3A6NCW0 530 aa16.98■□□□□ 0.31
CASP6-206ENST00000507550 USP17L4A6NCW7 530 aa16.98■□□□□ 0.31
CASP6-206ENST00000507550 INTS3Q68E01 1043 aaKnown RBP16.98■□□□□ 0.31
CASP6-206ENST00000507550 USP17L1Q7RTZ2 530 aa16.98■□□□□ 0.31
CASP6-206ENST00000507550 BABAM1Q9NWV8 329 aa16.98■□□□□ 0.31
CASP6-206ENST00000507550 NF2P35240 595 aa16.97■□□□□ 0.31
CASP6-206ENST00000507550 RIPK4P57078 832 aa16.97■□□□□ 0.31
CASP6-206ENST00000507550 PRKG1Q13976 671 aa16.97■□□□□ 0.31
CASP6-206ENST00000507550 MXD3Q9BW11 206 aa16.97■□□□□ 0.31
CASP6-206ENST00000507550 WNT10BO00744 389 aa16.96■□□□□ 0.31
CASP6-206ENST00000507550 EN2P19622 333 aaPredicted RBP16.96■□□□□ 0.31
CASP6-206ENST00000507550 SPRYD7Q5W111 196 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms