RNA–Protein interactions for RNA: ENST00000507485.1

RPS3A-206, Transcript of ribosomal protein S3A, humanhuman

TSL 1 (best)

Gene RPS3A, Length 1,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-206ENST00000507485 EPHX2P34913 555 aa11.88□□□□□ -0.51
RPS3A-206ENST00000507485 PTPN5P54829 565 aa11.88□□□□□ -0.51
RPS3A-206ENST00000507485 KRT24Q2M2I5 525 aa11.88□□□□□ -0.51
RPS3A-206ENST00000507485 MAP1SQ66K74 1059 aaPredicted RBP11.88□□□□□ -0.51
RPS3A-206ENST00000507485 KIF6Q6ZMV9 814 aa11.88□□□□□ -0.51
RPS3A-206ENST00000507485 NYXQ9GZU5 481 aa11.88□□□□□ -0.51
RPS3A-206ENST00000507485 HACL1Q9UJ83 578 aa11.88□□□□□ -0.51
RPS3A-206ENST00000507485 FOXN1O15353 648 aa11.87□□□□□ -0.51
RPS3A-206ENST00000507485 ZNF454Q8N9F8 522 aa11.87□□□□□ -0.51
RPS3A-206ENST00000507485 TSPYL4Q9UJ04 414 aa11.87□□□□□ -0.51
RPS3A-206ENST00000507485 ANKRD36CQ5JPF3 1778 aa11.87□□□□□ -0.51
RPS3A-206ENST00000507485 ERBB4Q15303 1308 aa11.87□□□□□ -0.51
RPS3A-206ENST00000507485 MAPK8IP3Q9UPT6 1336 aa11.87□□□□□ -0.51
RPS3A-206ENST00000507485 TAF1P21675 1872 aa11.87□□□□□ -0.51
RPS3A-206ENST00000507485 EIF2S2P20042 333 aaKnown RBP11.86□□□□□ -0.51
RPS3A-206ENST00000507485 VEGFBP49765 207 aa11.86□□□□□ -0.51
RPS3A-206ENST00000507485 RIPK4P57078 832 aa11.86□□□□□ -0.51
RPS3A-206ENST00000507485 GPC2Q8N158 579 aa11.86□□□□□ -0.51
RPS3A-206ENST00000507485 OXER1Q8TDS5 423 aa11.86□□□□□ -0.51
RPS3A-206ENST00000507485 NECTIN2Q92692 538 aa11.86□□□□□ -0.51
RPS3A-206ENST00000507485 CRAMP1Q96RY5 1269 aa11.86□□□□□ -0.51
RPS3A-206ENST00000507485 COL4A1P02462 1669 aa11.86□□□□□ -0.51
RPS3A-206ENST00000507485 PPEF1O14829 653 aaPredicted RBP11.86□□□□□ -0.51
RPS3A-206ENST00000507485 NEFMP07197 916 aa11.86□□□□□ -0.51
RPS3A-206ENST00000507485 TMPOP42166 694 aaKnown RBP11.86□□□□□ -0.51
RPS3A-206ENST00000507485 EPS15P42566 896 aa11.86□□□□□ -0.51
RPS3A-206ENST00000507485 SCNN1DP51172 638 aa11.86□□□□□ -0.51
RPS3A-206ENST00000507485 RPGRQ92834 1020 aaKnown RBP11.86□□□□□ -0.51
RPS3A-206ENST00000507485 ZNF428Q96B54 188 aa11.86□□□□□ -0.51
RPS3A-206ENST00000507485 GJA3Q9Y6H8 435 aa11.86□□□□□ -0.51
RPS3A-206ENST00000507485 TMEM88BA6NKF7 163 aa11.85□□□□□ -0.51
RPS3A-206ENST00000507485 CCDC146Q8IYE0 955 aa11.85□□□□□ -0.51
RPS3A-206ENST00000507485 CNTROBQ8N137 903 aa11.85□□□□□ -0.51
RPS3A-206ENST00000507485 ABCC4O15439 1325 aa11.84□□□□□ -0.51
RPS3A-206ENST00000507485 GOLGA8CPA6NN73 597 aa11.84□□□□□ -0.51
RPS3A-206ENST00000507485 SLC10A5Q5PT55 438 aa11.84□□□□□ -0.51
RPS3A-206ENST00000507485 CC2D2BQ6DHV5 1058 aa11.84□□□□□ -0.51
RPS3A-206ENST00000507485 LARGE2Q8N3Y3 721 aa11.84□□□□□ -0.51
RPS3A-206ENST00000507485 JDP2Q8WYK2 163 aa11.84□□□□□ -0.51
RPS3A-206ENST00000507485 RBM17Q96I25 401 aaKnown RBP11.84□□□□□ -0.51
RPS3A-206ENST00000507485 RYDENQ9NUL5 291 aaKnown RBP11.84□□□□□ -0.51
RPS3A-206ENST00000507485 DUOX1Q9NRD9 1551 aa11.84□□□□□ -0.51
RPS3A-206ENST00000507485 HCLS1P14317 486 aaPredicted RBP11.83□□□□□ -0.52
RPS3A-206ENST00000507485 AIMP1Q12904 312 aaKnown RBP11.83□□□□□ -0.52
RPS3A-206ENST00000507485 AOC3Q16853 763 aa11.83□□□□□ -0.52
RPS3A-206ENST00000507485 PARP10Q53GL7 1025 aa11.83□□□□□ -0.52
RPS3A-206ENST00000507485 COPS6Q7L5N1 327 aa11.83□□□□□ -0.52
RPS3A-206ENST00000507485 PPP1R42Q7Z4L9 355 aa11.83□□□□□ -0.52
RPS3A-206ENST00000507485 NLRP10Q86W26 655 aa11.83□□□□□ -0.52
RPS3A-206ENST00000507485 XAGE3Q8WTP9 111 aa11.83□□□□□ -0.52
RPS3A-206ENST00000507485 DDX60Q8IY21 1712 aaKnown RBP11.83□□□□□ -0.52
RPS3A-206ENST00000507485 RASSF10A6NK89 507 aa11.82□□□□□ -0.52
RPS3A-206ENST00000507485 BHMG1C9JSJ3 638 aaPredicted RBP11.82□□□□□ -0.52
RPS3A-206ENST00000507485 PTPREP23469 700 aa11.82□□□□□ -0.52
RPS3A-206ENST00000507485 EIF6P56537 245 aaKnown RBP11.82□□□□□ -0.52
RPS3A-206ENST00000507485 PNMA8AQ86V59 439 aaPredicted RBP11.82□□□□□ -0.52
RPS3A-206ENST00000507485 UTP14AQ9BVJ6 771 aaKnown RBP11.82□□□□□ -0.52
RPS3A-206ENST00000507485 ATP6V0A2Q9Y487 856 aa11.82□□□□□ -0.52
RPS3A-206ENST00000507485 TRAF5O00463 557 aa11.81□□□□□ -0.52
RPS3A-206ENST00000507485 CHL1O00533 1208 aa11.81□□□□□ -0.52
RPS3A-206ENST00000507485 PPIP5K2O43314 1243 aa11.81□□□□□ -0.52
RPS3A-206ENST00000507485 NEUROD2Q15784 382 aa11.81□□□□□ -0.52
RPS3A-206ENST00000507485 THSD4Q6ZMP0 1018 aa11.81□□□□□ -0.52
RPS3A-206ENST00000507485 NLRP3Q96P20 1036 aa11.81□□□□□ -0.52
RPS3A-206ENST00000507485 WBP1LQ9NX94 342 aa11.81□□□□□ -0.52
RPS3A-206ENST00000507485 THSD7BQ9C0I4 1608 aa11.81□□□□□ -0.52
RPS3A-206ENST00000507485 CXCL9Q07325 125 aa11.81□□□□□ -0.52
RPS3A-206ENST00000507485 RALBP1Q15311 655 aa11.81□□□□□ -0.52
RPS3A-206ENST00000507485 RTFDC1Q9BY42 306 aaPredicted RBP11.81□□□□□ -0.52
RPS3A-206ENST00000507485 IRX2Q9BZI1 471 aaPredicted RBP11.81□□□□□ -0.52
RPS3A-206ENST00000507485 PNNQ9H307 717 aaKnown RBP11.81□□□□□ -0.52
RPS3A-206ENST00000507485 DDX21Q9NR30 783 aaKnown RBP eCLIP11.81□□□□□ -0.52
RPS3A-206ENST00000507485 BABAM1Q9NWV8 329 aa11.81□□□□□ -0.52
RPS3A-206ENST00000507485 CHPF2Q9P2E5 772 aa11.81□□□□□ -0.52
RPS3A-206ENST00000507485 LRRC37AA6NMS7 1700 aa11.8□□□□□ -0.52
RPS3A-206ENST00000507485 SHTN1A0MZ66 631 aa11.8□□□□□ -0.52
RPS3A-206ENST00000507485 DDX10Q13206 875 aaKnown RBP11.8□□□□□ -0.52
RPS3A-206ENST00000507485 TCIRG1Q13488 830 aa11.8□□□□□ -0.52
RPS3A-206ENST00000507485 DEFB115Q30KQ5 88 aa11.8□□□□□ -0.52
RPS3A-206ENST00000507485 CST9Q5W186 159 aa11.8□□□□□ -0.52
RPS3A-206ENST00000507485 NIM1KQ8IY84 436 aa11.8□□□□□ -0.52
RPS3A-206ENST00000507485 TRPM7Q96QT4 1865 aa11.79□□□□□ -0.52
RPS3A-206ENST00000507485 GPRC5DQ9NZD1 345 aa11.79□□□□□ -0.52
RPS3A-206ENST00000507485 MYBBP1AQ9BQG0 1328 aaKnown RBP11.79□□□□□ -0.52
RPS3A-206ENST00000507485 WDR33Q9C0J8 1336 aaKnown RBP11.79□□□□□ -0.52
RPS3A-206ENST00000507485 YDJCA8MPS7 323 aa11.78□□□□□ -0.52
RPS3A-206ENST00000507485 HSPA8P11142 646 aaKnown RBP11.78□□□□□ -0.52
RPS3A-206ENST00000507485 LMOD1P29536 600 aaPredicted RBP11.78□□□□□ -0.52
RPS3A-206ENST00000507485 GMPSP49915 693 aaPredicted RBP11.78□□□□□ -0.52
RPS3A-206ENST00000507485 LBX1P52954 281 aa11.78□□□□□ -0.52
RPS3A-206ENST00000507485 FOSBP53539 338 aa11.78□□□□□ -0.52
RPS3A-206ENST00000507485 HIRAP54198 1017 aaPredicted RBP11.78□□□□□ -0.52
RPS3A-206ENST00000507485 GRIPAP1Q4V328 841 aa11.78□□□□□ -0.52
RPS3A-206ENST00000507485 PPP1R15BQ5SWA1 713 aa11.78□□□□□ -0.52
RPS3A-206ENST00000507485 SP8Q8IXZ3 490 aa11.78□□□□□ -0.52
RPS3A-206ENST00000507485 MRPL50Q8N5N7 158 aaKnown RBP11.78□□□□□ -0.52
RPS3A-206ENST00000507485 TRMT112Q9UI30 125 aaKnown RBP11.78□□□□□ -0.52
RPS3A-206ENST00000507485 ZNRF3Q9ULT6 936 aa11.78□□□□□ -0.52
RPS3A-206ENST00000507485 ABT1Q9ULW3 272 aaKnown RBP11.78□□□□□ -0.52
RPS3A-206ENST00000507485 ADAMTS8Q9UP79 889 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms