RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 MMP20O60882 483 aa5.86□□□□□ -1.47
LSM6-205ENST00000507449 CPNE3O75131 537 aaKnown RBP5.86□□□□□ -1.47
LSM6-205ENST00000507449 PHACTR2O75167 634 aa5.86□□□□□ -1.47
LSM6-205ENST00000507449 ADAMTS2O95450 1211 aa5.86□□□□□ -1.47
LSM6-205ENST00000507449 POLR3DP05423 398 aaPredicted RBP5.86□□□□□ -1.47
LSM6-205ENST00000507449 FURINP09958 794 aa5.86□□□□□ -1.47
LSM6-205ENST00000507449 FGFR3P22607 806 aa5.86□□□□□ -1.47
LSM6-205ENST00000507449 SPEM2Q0P670 501 aa5.86□□□□□ -1.47
LSM6-205ENST00000507449 MRPL58Q14197 206 aaKnown RBP5.86□□□□□ -1.47
LSM6-205ENST00000507449 GAS6Q14393 721 aa5.86□□□□□ -1.47
LSM6-205ENST00000507449 RNFT1Q5M7Z0 435 aa5.86□□□□□ -1.47
LSM6-205ENST00000507449 LDLRAD1Q5T700 205 aa5.86□□□□□ -1.47
LSM6-205ENST00000507449 NEDD1Q8NHV4 660 aa5.86□□□□□ -1.47
LSM6-205ENST00000507449 KRTAP9-9Q9BYP9 154 aa5.86□□□□□ -1.47
LSM6-205ENST00000507449 KRTAP9-4Q9BYQ2 154 aa5.86□□□□□ -1.47
LSM6-205ENST00000507449 IGSF5Q9NSI5 407 aa5.86□□□□□ -1.47
LSM6-205ENST00000507449 RECKO95980 971 aa5.85□□□□□ -1.47
LSM6-205ENST00000507449 NFKB1P19838 968 aa5.85□□□□□ -1.47
LSM6-205ENST00000507449 VAMP1P23763 118 aa5.85□□□□□ -1.47
LSM6-205ENST00000507449 DAB2P98082 770 aa5.85□□□□□ -1.47
LSM6-205ENST00000507449 SRSF11Q05519 484 aaKnown RBP5.85□□□□□ -1.47
LSM6-205ENST00000507449 FAM182BQ5T319 152 aa5.85□□□□□ -1.47
LSM6-205ENST00000507449 COL13A1Q5TAT6 717 aaPredicted RBP5.85□□□□□ -1.47
LSM6-205ENST00000507449 ALG1LQ6GMV1 187 aa5.85□□□□□ -1.47
LSM6-205ENST00000507449 EPS8L3Q8TE67 593 aaKnown RBP5.85□□□□□ -1.47
LSM6-205ENST00000507449 CCDC74AQ96AQ1 378 aa5.85□□□□□ -1.47
LSM6-205ENST00000507449 NEFLP07196 543 aa5.84□□□□□ -1.47
LSM6-205ENST00000507449 RARAP10276 462 aa5.84□□□□□ -1.47
LSM6-205ENST00000507449 ATP2B2Q01814 1243 aa5.84□□□□□ -1.47
LSM6-205ENST00000507449 TMC4Q7Z404 712 aa5.84□□□□□ -1.47
LSM6-205ENST00000507449 OR13H1Q8NG92 308 aa5.84□□□□□ -1.47
LSM6-205ENST00000507449 FBF1Q8TES7 1133 aa5.84□□□□□ -1.47
LSM6-205ENST00000507449 GOLGA2P5Q9HBQ8 144 aa5.84□□□□□ -1.47
LSM6-205ENST00000507449 NPHS2Q9NP85 383 aa5.84□□□□□ -1.47
LSM6-205ENST00000507449 LATS2Q9NRM7 1088 aa5.84□□□□□ -1.47
LSM6-205ENST00000507449 KANSL3Q9P2N6 904 aa5.84□□□□□ -1.47
LSM6-205ENST00000507449 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.84□□□□□ -1.47
LSM6-205ENST00000507449 CNTNAP5Q8WYK1 1306 aa5.83□□□□□ -1.48
LSM6-205ENST00000507449 MAP3K6O95382 1288 aa5.83□□□□□ -1.48
LSM6-205ENST00000507449 CELA2BP08218 269 aaPredicted RBP5.83□□□□□ -1.48
LSM6-205ENST00000507449 GNA15P30679 374 aa5.83□□□□□ -1.48
LSM6-205ENST00000507449 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.83□□□□□ -1.48
LSM6-205ENST00000507449 PEAR1Q5VY43 1037 aaPredicted RBP5.83□□□□□ -1.48
LSM6-205ENST00000507449 LYPD4Q6UWN0 246 aa5.83□□□□□ -1.48
LSM6-205ENST00000507449 GALNT12Q8IXK2 581 aa5.83□□□□□ -1.48
LSM6-205ENST00000507449 BHMTQ93088 406 aa5.83□□□□□ -1.48
LSM6-205ENST00000507449 TLR7Q9NYK1 1049 aaKnown RBP5.83□□□□□ -1.48
LSM6-205ENST00000507449 KLF15Q9UIH9 416 aa5.83□□□□□ -1.48
LSM6-205ENST00000507449 PHF24Q9UPV7 400 aa5.83□□□□□ -1.48
LSM6-205ENST00000507449 SCO2A0A1W2PP80 73 aa5.82□□□□□ -1.48
LSM6-205ENST00000507449 ZBTB42B2RXF5 422 aa5.82□□□□□ -1.48
LSM6-205ENST00000507449 KIF4AO95239 1232 aa5.82□□□□□ -1.48
LSM6-205ENST00000507449 HOXD8P13378 290 aaPredicted RBP5.82□□□□□ -1.48
LSM6-205ENST00000507449 ACPPP15309 386 aa5.82□□□□□ -1.48
LSM6-205ENST00000507449 CES1P23141 567 aa5.82□□□□□ -1.48
LSM6-205ENST00000507449 XPCQ01831 940 aaPredicted RBP5.82□□□□□ -1.48
LSM6-205ENST00000507449 ZMYM1Q5SVZ6 1142 aa5.82□□□□□ -1.48
LSM6-205ENST00000507449 TTC39BQ5VTQ0 682 aaPredicted RBP5.82□□□□□ -1.48
LSM6-205ENST00000507449 TRERF1Q96PN7 1200 aa5.82□□□□□ -1.48
LSM6-205ENST00000507449 OSBPL7Q9BZF2 842 aa5.82□□□□□ -1.48
LSM6-205ENST00000507449 SALL4Q9UJQ4 1053 aa5.82□□□□□ -1.48
LSM6-205ENST00000507449 SOX18P35713 384 aa5.81□□□□□ -1.48
LSM6-205ENST00000507449 RANGAP1P46060 587 aaPredicted RBP5.81□□□□□ -1.48
LSM6-205ENST00000507449 FGD1P98174 961 aa5.81□□□□□ -1.48
LSM6-205ENST00000507449 PSMD2Q13200 908 aa5.81□□□□□ -1.48
LSM6-205ENST00000507449 ZNF468Q5VIY5 522 aaPredicted RBP5.81□□□□□ -1.48
LSM6-205ENST00000507449 DHX32Q7L7V1 743 aaKnown RBP5.81□□□□□ -1.48
LSM6-205ENST00000507449 PNMA5Q96PV4 448 aa5.81□□□□□ -1.48
LSM6-205ENST00000507449 BACH2Q9BYV9 841 aa5.81□□□□□ -1.48
LSM6-205ENST00000507449 EFCC1Q9HA90 598 aa5.81□□□□□ -1.48
LSM6-205ENST00000507449 ITGB2P05107 769 aa5.8□□□□□ -1.48
LSM6-205ENST00000507449 CTSHP09668 335 aa5.8□□□□□ -1.48
LSM6-205ENST00000507449 FOXR1Q6PIV2 292 aa5.8□□□□□ -1.48
LSM6-205ENST00000507449 SYT9Q86SS6 491 aa5.8□□□□□ -1.48
LSM6-205ENST00000507449 NBPF11Q86T75 865 aa5.8□□□□□ -1.48
LSM6-205ENST00000507449 GLIS3Q8NEA6 775 aa5.8□□□□□ -1.48
LSM6-205ENST00000507449 PMEPA1Q969W9 287 aa5.8□□□□□ -1.48
LSM6-205ENST00000507449 NSUN5Q96P11 429 aaKnown RBP5.8□□□□□ -1.48
LSM6-205ENST00000507449 MDFIQ99750 246 aa5.8□□□□□ -1.48
LSM6-205ENST00000507449 AK5Q9Y6K8 562 aa5.8□□□□□ -1.48
LSM6-205ENST00000507449 A0A1W2PP55 124 aa5.79□□□□□ -1.48
LSM6-205ENST00000507449 SORBS3O60504 671 aa5.79□□□□□ -1.48
LSM6-205ENST00000507449 COBLO75128 1261 aa5.79□□□□□ -1.48
LSM6-205ENST00000507449 PSAPP07602 524 aa5.79□□□□□ -1.48
LSM6-205ENST00000507449 BMP4P12644 408 aa5.79□□□□□ -1.48
LSM6-205ENST00000507449 NRLP54845 237 aa5.79□□□□□ -1.48
LSM6-205ENST00000507449 PCBP4P57723 403 aaKnown RBP5.79□□□□□ -1.48
LSM6-205ENST00000507449 PLAURQ03405 335 aa5.79□□□□□ -1.48
LSM6-205ENST00000507449 GRM2Q14416 872 aa5.79□□□□□ -1.48
LSM6-205ENST00000507449 TSNAXIP1Q2TAA8 658 aa5.79□□□□□ -1.48
LSM6-205ENST00000507449 KIAA0319Q5VV43 1072 aa5.79□□□□□ -1.48
LSM6-205ENST00000507449 TRPM4Q8TD43 1214 aa5.79□□□□□ -1.48
LSM6-205ENST00000507449 C12orf49Q9H741 205 aa5.79□□□□□ -1.48
LSM6-205ENST00000507449 NFKBIEO00221 500 aa5.78□□□□□ -1.48
LSM6-205ENST00000507449 SIN3BO75182 1162 aa5.78□□□□□ -1.48
LSM6-205ENST00000507449 TRPA1O75762 1119 aa5.78□□□□□ -1.48
LSM6-205ENST00000507449 MX2P20592 715 aa5.78□□□□□ -1.48
LSM6-205ENST00000507449 GPLD1P80108 840 aa5.78□□□□□ -1.48
LSM6-205ENST00000507449 MLLT1Q03111 559 aaPredicted RBP5.78□□□□□ -1.48
LSM6-205ENST00000507449 HYAL2Q12891 473 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms