RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 F8W735 103 aaPredicted RBP6.01□□□□□ -1.45
HMGB3P15-201ENST00000507326 HOXD8P13378 290 aaPredicted RBP6.01□□□□□ -1.45
HMGB3P15-201ENST00000507326 BRD2P25440 801 aaKnown RBP6.01□□□□□ -1.45
HMGB3P15-201ENST00000507326 SOX18P35713 384 aa6.01□□□□□ -1.45
HMGB3P15-201ENST00000507326 TRIP4Q15650 581 aaPredicted RBP6.01□□□□□ -1.45
HMGB3P15-201ENST00000507326 SWI5Q1ZZU3 235 aa6.01□□□□□ -1.45
HMGB3P15-201ENST00000507326 C16orf46Q6P387 395 aa6.01□□□□□ -1.45
HMGB3P15-201ENST00000507326 MRPL18Q9H0U6 180 aaKnown RBP6.01□□□□□ -1.45
HMGB3P15-201ENST00000507326 PODXL2Q9NZ53 605 aa6.01□□□□□ -1.45
HMGB3P15-201ENST00000507326 ZMIZ1Q9ULJ6 1067 aa6.01□□□□□ -1.45
HMGB3P15-201ENST00000507326 RNF112Q9ULX5 631 aa6.01□□□□□ -1.45
HMGB3P15-201ENST00000507326 SETDB1Q15047 1291 aa6□□□□□ -1.45
HMGB3P15-201ENST00000507326 OCLNQ16625 522 aa6□□□□□ -1.45
HMGB3P15-201ENST00000507326 FAM26DQ5JW98 314 aa6□□□□□ -1.45
HMGB3P15-201ENST00000507326 NLRP13Q86W25 1043 aa6□□□□□ -1.45
HMGB3P15-201ENST00000507326 MKNK1Q9BUB5 465 aa6□□□□□ -1.45
HMGB3P15-201ENST00000507326 UBAP1LF5GYI3 381 aa5.99□□□□□ -1.45
HMGB3P15-201ENST00000507326 FSTP19883 344 aa5.99□□□□□ -1.45
HMGB3P15-201ENST00000507326 CAPN12Q6ZSI9 719 aa5.99□□□□□ -1.45
HMGB3P15-201ENST00000507326 DZIP1LQ8IYY4 767 aaKnown RBP5.99□□□□□ -1.45
HMGB3P15-201ENST00000507326 AGGF1Q8N302 714 aaeCLIP5.99□□□□□ -1.45
HMGB3P15-201ENST00000507326 TMEM130Q8N3G9 435 aa5.99□□□□□ -1.45
HMGB3P15-201ENST00000507326 STK32AQ8WU08 396 aa5.99□□□□□ -1.45
HMGB3P15-201ENST00000507326 SRA1Q9HD15 236 aaKnown RBP5.99□□□□□ -1.45
HMGB3P15-201ENST00000507326 TNFRSF10BO14763 440 aa5.98□□□□□ -1.45
HMGB3P15-201ENST00000507326 GLB1P16278 677 aa5.98□□□□□ -1.45
HMGB3P15-201ENST00000507326 NAA30Q147X3 362 aaPredicted RBP5.98□□□□□ -1.45
HMGB3P15-201ENST00000507326 COL13A1Q5TAT6 717 aaPredicted RBP5.98□□□□□ -1.45
HMGB3P15-201ENST00000507326 MAP4K3Q8IVH8 894 aa5.98□□□□□ -1.45
HMGB3P15-201ENST00000507326 OR13H1Q8NG92 308 aa5.98□□□□□ -1.45
HMGB3P15-201ENST00000507326 PIK3R5Q8WYR1 880 aa5.98□□□□□ -1.45
HMGB3P15-201ENST00000507326 PPME1Q9Y570 386 aa5.98□□□□□ -1.45
HMGB3P15-201ENST00000507326 LINC01387J3KSC0 135 aa5.97□□□□□ -1.45
HMGB3P15-201ENST00000507326 ATP11AP98196 1134 aa5.97□□□□□ -1.45
HMGB3P15-201ENST00000507326 FAM69CQ0P6D2 419 aa5.97□□□□□ -1.45
HMGB3P15-201ENST00000507326 ELOAQ14241 798 aaKnown RBP5.97□□□□□ -1.45
HMGB3P15-201ENST00000507326 TXNDC11Q6PKC3 985 aa5.97□□□□□ -1.45
HMGB3P15-201ENST00000507326 DCAF11Q8TEB1 546 aa5.97□□□□□ -1.45
HMGB3P15-201ENST00000507326 LACRTQ9GZZ8 138 aa5.97□□□□□ -1.45
HMGB3P15-201ENST00000507326 MUC3BQ9H195 1237 aa5.97□□□□□ -1.45
HMGB3P15-201ENST00000507326 FAM13BQ9NYF5 915 aa5.97□□□□□ -1.45
HMGB3P15-201ENST00000507326 CXXC1Q9P0U4 656 aaPredicted RBP5.97□□□□□ -1.45
HMGB3P15-201ENST00000507326 CDC25BP30305 580 aa5.96□□□□□ -1.46
HMGB3P15-201ENST00000507326 SSTR4P31391 388 aa5.96□□□□□ -1.46
HMGB3P15-201ENST00000507326 ZAP70P43403 619 aa5.96□□□□□ -1.46
HMGB3P15-201ENST00000507326 HYAL2Q12891 473 aa5.96□□□□□ -1.46
HMGB3P15-201ENST00000507326 TTC39BQ5VTQ0 682 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P15-201ENST00000507326 CEP135Q66GS9 1140 aa5.96□□□□□ -1.46
HMGB3P15-201ENST00000507326 Q6ZS46 218 aa5.96□□□□□ -1.46
HMGB3P15-201ENST00000507326 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.96□□□□□ -1.46
HMGB3P15-201ENST00000507326 CACTIN-AS1Q8N1I8 211 aa5.96□□□□□ -1.46
HMGB3P15-201ENST00000507326 GALNT11Q8NCW6 608 aa5.96□□□□□ -1.46
HMGB3P15-201ENST00000507326 GPR152Q8TDT2 470 aa5.96□□□□□ -1.46
HMGB3P15-201ENST00000507326 COL26A1Q96A83 441 aa5.96□□□□□ -1.46
HMGB3P15-201ENST00000507326 SPACA7Q96KW9 195 aa5.96□□□□□ -1.46
HMGB3P15-201ENST00000507326 PCMTD2Q9NV79 361 aa5.96□□□□□ -1.46
HMGB3P15-201ENST00000507326 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.95□□□□□ -1.46
HMGB3P15-201ENST00000507326 WISP1O95388 367 aa5.95□□□□□ -1.46
HMGB3P15-201ENST00000507326 SCNN1AP37088 669 aa5.95□□□□□ -1.46
HMGB3P15-201ENST00000507326 KCNK4Q9NYG8 393 aa5.95□□□□□ -1.46
HMGB3P15-201ENST00000507326 SMNDC1O75940 238 aaKnown RBP eCLIP5.94□□□□□ -1.46
HMGB3P15-201ENST00000507326 CYP2E1P05181 493 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P15-201ENST00000507326 CDC27P30260 824 aa5.94□□□□□ -1.46
HMGB3P15-201ENST00000507326 TMEM164Q5U3C3 297 aa5.94□□□□□ -1.46
HMGB3P15-201ENST00000507326 ACAD11Q709F0 780 aa5.94□□□□□ -1.46
HMGB3P15-201ENST00000507326 UBL7Q96S82 380 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P15-201ENST00000507326 CARD10Q9BWT7 1032 aa5.94□□□□□ -1.46
HMGB3P15-201ENST00000507326 RASSF4Q9H2L5 321 aa5.94□□□□□ -1.46
HMGB3P15-201ENST00000507326 FNDC3AQ9Y2H6 1198 aaKnown RBP5.94□□□□□ -1.46
HMGB3P15-201ENST00000507326 RAXQ9Y2V3 346 aa5.94□□□□□ -1.46
HMGB3P15-201ENST00000507326 ZBTB39O15060 712 aa5.93□□□□□ -1.46
HMGB3P15-201ENST00000507326 PTCD1O75127 700 aaKnown RBP5.93□□□□□ -1.46
HMGB3P15-201ENST00000507326 CD68P34810 354 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P15-201ENST00000507326 SRPK2P78362 688 aaKnown RBP5.93□□□□□ -1.46
HMGB3P15-201ENST00000507326 ADAMTSL4Q6UY14 1074 aa5.93□□□□□ -1.46
HMGB3P15-201ENST00000507326 NPM2Q86SE8 214 aaKnown RBP5.93□□□□□ -1.46
HMGB3P15-201ENST00000507326 SLC51AQ86UW1 340 aa5.93□□□□□ -1.46
HMGB3P15-201ENST00000507326 STIM2Q9P246 746 aa5.93□□□□□ -1.46
HMGB3P15-201ENST00000507326 ATG7O95352 703 aa5.92□□□□□ -1.46
HMGB3P15-201ENST00000507326 IGLV1-40P01703 118 aa5.92□□□□□ -1.46
HMGB3P15-201ENST00000507326 KRTAP1-3Q8IUG1 177 aa5.92□□□□□ -1.46
HMGB3P15-201ENST00000507326 ABTB2Q8N961 1025 aa5.92□□□□□ -1.46
HMGB3P15-201ENST00000507326 KRTAP4-12Q9BQ66 201 aa5.92□□□□□ -1.46
HMGB3P15-201ENST00000507326 SH2B1Q9NRF2 756 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P15-201ENST00000507326 ABI2Q9NYB9 513 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P15-201ENST00000507326 STOML1Q9UBI4 398 aa5.92□□□□□ -1.46
HMGB3P15-201ENST00000507326 FSCN2O14926 492 aa5.91□□□□□ -1.46
HMGB3P15-201ENST00000507326 DDX3YO15523 660 aaKnown RBP5.91□□□□□ -1.46
HMGB3P15-201ENST00000507326 DHX15O43143 795 aaKnown RBP5.91□□□□□ -1.46
HMGB3P15-201ENST00000507326 KIF4AO95239 1232 aa5.91□□□□□ -1.46
HMGB3P15-201ENST00000507326 EPHA1P21709 976 aa5.91□□□□□ -1.46
HMGB3P15-201ENST00000507326 FAM117BQ6P1L5 589 aa5.91□□□□□ -1.46
HMGB3P15-201ENST00000507326 NCAPG2Q86XI2 1143 aa5.91□□□□□ -1.46
HMGB3P15-201ENST00000507326 ARMC10Q8N2F6 343 aa5.91□□□□□ -1.46
HMGB3P15-201ENST00000507326 CLP1Q92989 425 aaKnown RBP5.91□□□□□ -1.46
HMGB3P15-201ENST00000507326 PBX4Q9BYU1 374 aa5.91□□□□□ -1.46
HMGB3P15-201ENST00000507326 CEP41Q9BYV8 373 aa5.91□□□□□ -1.46
HMGB3P15-201ENST00000507326 KANSL3Q9P2N6 904 aa5.91□□□□□ -1.46
HMGB3P15-201ENST00000507326 GSC2O15499 205 aa5.9□□□□□ -1.46
HMGB3P15-201ENST00000507326 TGFB1P01137 390 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms