RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 MICALL1Q8N3F8 863 aa6.45□□□□□ -1.38
CDC42SE2-210ENST00000506929 OR13H1Q8NG92 308 aa6.45□□□□□ -1.38
CDC42SE2-210ENST00000506929 ZNF417Q8TAU3 575 aa6.45□□□□□ -1.38
CDC42SE2-210ENST00000506929 ZNF587Q96SQ5 575 aaPredicted RBP6.45□□□□□ -1.38
CDC42SE2-210ENST00000506929 KRTAP4-6Q9BYQ5 205 aa6.45□□□□□ -1.38
CDC42SE2-210ENST00000506929 ABI2Q9NYB9 513 aaPredicted RBP6.45□□□□□ -1.38
CDC42SE2-210ENST00000506929 NOP53Q9NZM5 478 aaKnown RBP6.45□□□□□ -1.38
CDC42SE2-210ENST00000506929 BRPF3Q9ULD4 1205 aa6.45□□□□□ -1.38
CDC42SE2-210ENST00000506929 EREGO14944 169 aa6.44□□□□□ -1.38
CDC42SE2-210ENST00000506929 TNFRSF21O75509 655 aa6.44□□□□□ -1.38
CDC42SE2-210ENST00000506929 IGHA1P01876 353 aa6.44□□□□□ -1.38
CDC42SE2-210ENST00000506929 COL8A1P27658 744 aa6.44□□□□□ -1.38
CDC42SE2-210ENST00000506929 GPLD1P80108 840 aa6.44□□□□□ -1.38
CDC42SE2-210ENST00000506929 ATP11AP98196 1134 aa6.44□□□□□ -1.38
CDC42SE2-210ENST00000506929 ORC1Q13415 861 aa6.44□□□□□ -1.38
CDC42SE2-210ENST00000506929 TTC39BQ5VTQ0 682 aaPredicted RBP6.44□□□□□ -1.38
CDC42SE2-210ENST00000506929 XKR5Q6UX68 686 aa6.44□□□□□ -1.38
CDC42SE2-210ENST00000506929 HOMEZQ8IX15 550 aa6.44□□□□□ -1.38
CDC42SE2-210ENST00000506929 TRIM11Q96F44 468 aa6.44□□□□□ -1.38
CDC42SE2-210ENST00000506929 LPIN3Q9BQK8 851 aa6.44□□□□□ -1.38
CDC42SE2-210ENST00000506929 FNDC3AQ9Y2H6 1198 aaKnown RBP6.44□□□□□ -1.38
CDC42SE2-210ENST00000506929 LOC102724428A0A0B4J2F2 783 aa6.43□□□□□ -1.38
CDC42SE2-210ENST00000506929 PSAPP07602 524 aa6.43□□□□□ -1.38
CDC42SE2-210ENST00000506929 SIK1P57059 783 aa6.43□□□□□ -1.38
CDC42SE2-210ENST00000506929 GRIK5Q16478 980 aa6.43□□□□□ -1.38
CDC42SE2-210ENST00000506929 PCSK7Q16549 785 aa6.43□□□□□ -1.38
CDC42SE2-210ENST00000506929 PDE12Q6L8Q7 609 aaKnown RBP6.43□□□□□ -1.38
CDC42SE2-210ENST00000506929 GPAT2Q6NUI2 795 aa6.43□□□□□ -1.38
CDC42SE2-210ENST00000506929 TMC7Q7Z402 723 aa6.43□□□□□ -1.38
CDC42SE2-210ENST00000506929 HHIPQ96QV1 700 aa6.43□□□□□ -1.38
CDC42SE2-210ENST00000506929 NIF3L1Q9GZT8 377 aa6.43□□□□□ -1.38
CDC42SE2-210ENST00000506929 GZF1Q9H116 711 aaPredicted RBP6.43□□□□□ -1.38
CDC42SE2-210ENST00000506929 PRDM6Q9NQX0 595 aa6.43□□□□□ -1.38
CDC42SE2-210ENST00000506929 LATS2Q9NRM7 1088 aa6.43□□□□□ -1.38
CDC42SE2-210ENST00000506929 EIF2AK2P19525 551 aaKnown RBP6.42□□□□□ -1.38
CDC42SE2-210ENST00000506929 MAPK1P28482 360 aa6.42□□□□□ -1.38
CDC42SE2-210ENST00000506929 NRLP54845 237 aa6.42□□□□□ -1.38
CDC42SE2-210ENST00000506929 SUZ12Q15022 739 aaKnown RBP6.42□□□□□ -1.38
CDC42SE2-210ENST00000506929 FAM129BQ96TA1 746 aa6.42□□□□□ -1.38
CDC42SE2-210ENST00000506929 SMG9Q9H0W8 520 aaKnown RBP6.42□□□□□ -1.38
CDC42SE2-210ENST00000506929 JPH1Q9HDC5 661 aaPredicted RBP6.42□□□□□ -1.38
CDC42SE2-210ENST00000506929 SPDYE3A6NKU9 549 aa6.41□□□□□ -1.38
CDC42SE2-210ENST00000506929 FAM229AH3BQW9 127 aa6.41□□□□□ -1.38
CDC42SE2-210ENST00000506929 NDUFB5O43674 189 aa6.41□□□□□ -1.38
CDC42SE2-210ENST00000506929 PCSK2P16519 638 aa6.41□□□□□ -1.38
CDC42SE2-210ENST00000506929 AFF1P51825 1210 aaKnown RBP6.41□□□□□ -1.38
CDC42SE2-210ENST00000506929 PLA2G4EQ3MJ16 856 aa6.41□□□□□ -1.38
CDC42SE2-210ENST00000506929 TMC1Q8TDI8 760 aa6.41□□□□□ -1.38
CDC42SE2-210ENST00000506929 SETDB2Q96T68 719 aa6.41□□□□□ -1.38
CDC42SE2-210ENST00000506929 PLVAPQ9BX97 442 aa6.41□□□□□ -1.38
CDC42SE2-210ENST00000506929 RASSF4Q9H2L5 321 aa6.41□□□□□ -1.38
CDC42SE2-210ENST00000506929 SALL4Q9UJQ4 1053 aa6.41□□□□□ -1.38
CDC42SE2-210ENST00000506929 TRIM33Q9UPN9 1127 aa6.41□□□□□ -1.38
CDC42SE2-210ENST00000506929 KRBA1A5PL33 1030 aa6.4□□□□□ -1.38
CDC42SE2-210ENST00000506929 PHACTR2O75167 634 aa6.4□□□□□ -1.38
CDC42SE2-210ENST00000506929 NID1P14543 1247 aa6.4□□□□□ -1.38
CDC42SE2-210ENST00000506929 CES1P23141 567 aa6.4□□□□□ -1.38
CDC42SE2-210ENST00000506929 ELMSAN1Q6PJG2 1045 aa6.4□□□□□ -1.38
CDC42SE2-210ENST00000506929 CEP120Q8N960 986 aa6.4□□□□□ -1.38
CDC42SE2-210ENST00000506929 TTC16Q8NEE8 873 aa6.4□□□□□ -1.38
CDC42SE2-210ENST00000506929 PLD4Q96BZ4 506 aa6.4□□□□□ -1.38
CDC42SE2-210ENST00000506929 ZFYVE28Q9HCC9 887 aa6.4□□□□□ -1.38
CDC42SE2-210ENST00000506929 DCTN4Q9UJW0 460 aa6.4□□□□□ -1.38
CDC42SE2-210ENST00000506929 MSTNO14793 375 aa6.39□□□□□ -1.39
CDC42SE2-210ENST00000506929 LILRB5O75023 590 aa6.39□□□□□ -1.39
CDC42SE2-210ENST00000506929 RGS9O75916 674 aaPredicted RBP6.39□□□□□ -1.39
CDC42SE2-210ENST00000506929 KIF4AO95239 1232 aa6.39□□□□□ -1.39
CDC42SE2-210ENST00000506929 HOXD8P13378 290 aaPredicted RBP6.39□□□□□ -1.39
CDC42SE2-210ENST00000506929 SOX18P35713 384 aa6.39□□□□□ -1.39
CDC42SE2-210ENST00000506929 USP5P45974 858 aa6.39□□□□□ -1.39
CDC42SE2-210ENST00000506929 BAG6P46379 1132 aa6.39□□□□□ -1.39
CDC42SE2-210ENST00000506929 HYAL2Q12891 473 aa6.39□□□□□ -1.39
CDC42SE2-210ENST00000506929 SND1Q7KZF4 910 aaKnown RBP eCLIP6.39□□□□□ -1.39
CDC42SE2-210ENST00000506929 RBCK1Q9BYM8 510 aa6.39□□□□□ -1.39
CDC42SE2-210ENST00000506929 NFKBIEO00221 500 aa6.38□□□□□ -1.39
CDC42SE2-210ENST00000506929 ITGB2P05107 769 aa6.38□□□□□ -1.39
CDC42SE2-210ENST00000506929 RPLP1P05386 114 aaKnown RBP6.38□□□□□ -1.39
CDC42SE2-210ENST00000506929 SPATA31C1P0DKV0 1188 aa6.38□□□□□ -1.39
CDC42SE2-210ENST00000506929 TRIM26Q12899 539 aaPredicted RBP6.38□□□□□ -1.39
CDC42SE2-210ENST00000506929 DSC3Q14574 896 aa6.38□□□□□ -1.39
CDC42SE2-210ENST00000506929 PRRT3Q5FWE3 981 aa6.38□□□□□ -1.39
CDC42SE2-210ENST00000506929 PEAR1Q5VY43 1037 aaPredicted RBP6.38□□□□□ -1.39
CDC42SE2-210ENST00000506929 GDF6Q6KF10 455 aaPredicted RBP6.38□□□□□ -1.39
CDC42SE2-210ENST00000506929 PI16Q6UXB8 463 aa6.38□□□□□ -1.39
CDC42SE2-210ENST00000506929 NCAPG2Q86XI2 1143 aa6.38□□□□□ -1.39
CDC42SE2-210ENST00000506929 DMRTC2Q8IXT2 367 aaPredicted RBP6.38□□□□□ -1.39
CDC42SE2-210ENST00000506929 GHRHP01286 108 aa6.37□□□□□ -1.39
CDC42SE2-210ENST00000506929 CDC25BP30305 580 aa6.37□□□□□ -1.39
CDC42SE2-210ENST00000506929 CEP135Q66GS9 1140 aa6.37□□□□□ -1.39
CDC42SE2-210ENST00000506929 ILDR2Q71H61 639 aa6.37□□□□□ -1.39
CDC42SE2-210ENST00000506929 SNX29Q8TEQ0 813 aa6.37□□□□□ -1.39
CDC42SE2-210ENST00000506929 POP1Q99575 1024 aaKnown RBP6.37□□□□□ -1.39
CDC42SE2-210ENST00000506929 SPOCK3Q9BQ16 436 aa6.37□□□□□ -1.39
CDC42SE2-210ENST00000506929 ZKSCAN3Q9BRR0 538 aa6.37□□□□□ -1.39
CDC42SE2-210ENST00000506929 LACRTQ9GZZ8 138 aa6.37□□□□□ -1.39
CDC42SE2-210ENST00000506929 SH2B1Q9NRF2 756 aaPredicted RBP6.37□□□□□ -1.39
CDC42SE2-210ENST00000506929 WWC3Q9ULE0 1092 aa6.37□□□□□ -1.39
CDC42SE2-210ENST00000506929 METTL12A8MUP2 240 aa6.36□□□□□ -1.39
CDC42SE2-210ENST00000506929 EIF1AYO14602 144 aaKnown RBP6.36□□□□□ -1.39
CDC42SE2-210ENST00000506929 EHHADHQ08426 723 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms