RNA–Protein interactions for RNA: ENST00000506734.5

SMN2-206, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 1,550 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-206ENST00000506734 SEC31BQ9NQW1 1179 aa22.43■■□□□ 1.18
SMN2-206ENST00000506734 PDE8BO95263 885 aa22.42■■□□□ 1.18
SMN2-206ENST00000506734 SLC4A3P48751 1232 aa22.42■■□□□ 1.18
SMN2-206ENST00000506734 ATP2B3Q16720 1220 aa22.42■■□□□ 1.18
SMN2-206ENST00000506734 TPTE2Q6XPS3 522 aa22.42■■□□□ 1.18
SMN2-206ENST00000506734 NBPF5PQ86XG9 351 aaPredicted RBP22.42■■□□□ 1.18
SMN2-206ENST00000506734 XAGE2Q96GT9 111 aa22.42■■□□□ 1.18
SMN2-206ENST00000506734 FSD1Q9BTV5 496 aa22.42■■□□□ 1.18
SMN2-206ENST00000506734 CARMIL3Q8ND23 1372 aa22.42■■□□□ 1.18
SMN2-206ENST00000506734 RAD50Q92878 1312 aa22.42■■□□□ 1.18
SMN2-206ENST00000506734 CWC27Q6UX04 472 aaKnown RBP22.42■■□□□ 1.18
SMN2-206ENST00000506734 CDC5LQ99459 802 aaKnown RBP22.42■■□□□ 1.18
SMN2-206ENST00000506734 MPHOSPH8Q99549 860 aa22.42■■□□□ 1.18
SMN2-206ENST00000506734 SNRKQ9NRH2 765 aa22.42■■□□□ 1.18
SMN2-206ENST00000506734 ARAP2Q8WZ64 1704 aa22.41■■□□□ 1.18
SMN2-206ENST00000506734 RGPD3A6NKT7 1758 aaPredicted RBP22.41■■□□□ 1.18
SMN2-206ENST00000506734 RGPD4Q7Z3J3 1758 aa22.41■■□□□ 1.18
SMN2-206ENST00000506734 GTF2E1P29083 439 aaPredicted RBP22.41■■□□□ 1.18
SMN2-206ENST00000506734 IGHMBP2P38935 993 aaKnown RBP22.41■■□□□ 1.18
SMN2-206ENST00000506734 RABEP1Q15276 862 aa22.41■■□□□ 1.18
SMN2-206ENST00000506734 CCDC158Q5M9N0 1113 aa22.41■■□□□ 1.18
SMN2-206ENST00000506734 IL17RAQ96F46 866 aa22.41■■□□□ 1.18
SMN2-206ENST00000506734 TNS1Q9HBL0 1735 aaKnown RBP22.4■■□□□ 1.18
SMN2-206ENST00000506734 MCCP23508 829 aa22.4■■□□□ 1.18
SMN2-206ENST00000506734 ADORA1P30542 326 aa22.4■■□□□ 1.18
SMN2-206ENST00000506734 POTEAQ6S8J7 498 aa22.4■■□□□ 1.18
SMN2-206ENST00000506734 IFIT1P09914 478 aaKnown RBP22.39■■□□□ 1.18
SMN2-206ENST00000506734 FGFR2P21802 821 aa22.39■■□□□ 1.18
SMN2-206ENST00000506734 ANAPC15P60006 121 aa22.39■■□□□ 1.18
SMN2-206ENST00000506734 PUM3Q15397 648 aaKnown RBP22.39■■□□□ 1.18
SMN2-206ENST00000506734 C3orf67Q6ZVT6 689 aa22.39■■□□□ 1.18
SMN2-206ENST00000506734 ZNF512BQ96KM6 892 aaPredicted RBP22.39■■□□□ 1.18
SMN2-206ENST00000506734 DNAJC2Q99543 621 aaKnown RBP22.39■■□□□ 1.18
SMN2-206ENST00000506734 LSG1Q9H089 658 aaKnown RBP22.39■■□□□ 1.18
SMN2-206ENST00000506734 APBA3O96018 575 aa22.38■■□□□ 1.17
SMN2-206ENST00000506734 GYS1P13807 737 aa22.38■■□□□ 1.17
SMN2-206ENST00000506734 NFIXQ14938 502 aa22.38■■□□□ 1.17
SMN2-206ENST00000506734 KBTBD3Q8NAB2 608 aa22.38■■□□□ 1.17
SMN2-206ENST00000506734 EDC3Q96F86 508 aaKnown RBP22.38■■□□□ 1.17
SMN2-206ENST00000506734 PAG1Q9NWQ8 432 aa22.38■■□□□ 1.17
SMN2-206ENST00000506734 NMIQ13287 307 aaPredicted RBP22.38■■□□□ 1.17
SMN2-206ENST00000506734 TTC39AQ5SRH9 613 aa22.38■■□□□ 1.17
SMN2-206ENST00000506734 GORABQ5T7V8 394 aa22.38■■□□□ 1.17
SMN2-206ENST00000506734 HSCBQ8IWL3 235 aa22.38■■□□□ 1.17
SMN2-206ENST00000506734 LPIN2Q92539 896 aa22.38■■□□□ 1.17
SMN2-206ENST00000506734 KIAA1211Q6ZU35 1233 aa22.37■■□□□ 1.17
SMN2-206ENST00000506734 NLRP3Q96P20 1036 aa22.37■■□□□ 1.17
SMN2-206ENST00000506734 COL4A1P02462 1669 aa22.36■■□□□ 1.17
SMN2-206ENST00000506734 MED23Q9ULK4 1368 aa22.36■■□□□ 1.17
SMN2-206ENST00000506734 HSPA4P34932 840 aa22.36■■□□□ 1.17
SMN2-206ENST00000506734 ANKRD18AQ8IVF6 992 aa22.36■■□□□ 1.17
SMN2-206ENST00000506734 FAM227BQ96M60 508 aa22.36■■□□□ 1.17
SMN2-206ENST00000506734 AKT1S1Q96B36 256 aa22.35■■□□□ 1.17
SMN2-206ENST00000506734 BSDC1Q9NW68 430 aaPredicted RBP22.35■■□□□ 1.17
SMN2-206ENST00000506734 NDUFB9Q9Y6M9 179 aa22.35■■□□□ 1.17
SMN2-206ENST00000506734 A0A0D9SFI3 127 aa22.34■■□□□ 1.17
SMN2-206ENST00000506734 DDX46Q7L014 1031 aaKnown RBP22.34■■□□□ 1.17
SMN2-206ENST00000506734 A0A1B0GUL6 1792 aa22.34■■□□□ 1.17
SMN2-206ENST00000506734 GOLIM4O00461 696 aa22.33■■□□□ 1.17
SMN2-206ENST00000506734 SLC5A1P13866 664 aa22.33■■□□□ 1.17
SMN2-206ENST00000506734 TNRC6CQ9HCJ0 1690 aaKnown RBP22.33■■□□□ 1.17
SMN2-206ENST00000506734 TM4SF1P30408 202 aa22.33■■□□□ 1.16
SMN2-206ENST00000506734 CHRNDQ07001 517 aa22.33■■□□□ 1.16
SMN2-206ENST00000506734 CNBD1Q8NA66 436 aa22.33■■□□□ 1.16
SMN2-206ENST00000506734 IL27Q8NEV9 243 aa22.33■■□□□ 1.16
SMN2-206ENST00000506734 CCDC171Q6TFL3 1326 aa22.33■■□□□ 1.16
SMN2-206ENST00000506734 AKAP11Q9UKA4 1901 aa22.32■■□□□ 1.16
SMN2-206ENST00000506734 ARID4AP29374 1257 aaPredicted RBP22.32■■□□□ 1.16
SMN2-206ENST00000506734 ZNF827Q17R98 1081 aa22.32■■□□□ 1.16
SMN2-206ENST00000506734 HELBQ8NG08 1087 aaPredicted RBP22.32■■□□□ 1.16
SMN2-206ENST00000506734 PALD1Q9ULE6 856 aa22.32■■□□□ 1.16
SMN2-206ENST00000506734 UQCRFS1P1P0C7P4 283 aa22.31■■□□□ 1.16
SMN2-206ENST00000506734 SCARF1Q14162 830 aa22.3■■□□□ 1.16
SMN2-206ENST00000506734 CCDC102BQ68D86 513 aa22.3■■□□□ 1.16
SMN2-206ENST00000506734 POTEDQ86YR6 584 aa22.3■■□□□ 1.16
SMN2-206ENST00000506734 TFCP2L1Q9NZI6 479 aa22.3■■□□□ 1.16
SMN2-206ENST00000506734 NPHP1O15259 732 aa22.29■■□□□ 1.16
SMN2-206ENST00000506734 TAF5LO75529 589 aa22.29■■□□□ 1.16
SMN2-206ENST00000506734 CD2BP2O95400 341 aaKnown RBP22.29■■□□□ 1.16
SMN2-206ENST00000506734 TAF1P21675 1872 aa22.29■■□□□ 1.16
SMN2-206ENST00000506734 MCAMP43121 646 aa22.29■■□□□ 1.16
SMN2-206ENST00000506734 PTH1RQ03431 593 aa22.29■■□□□ 1.16
SMN2-206ENST00000506734 LRRFIP1Q32MZ4 808 aaKnown RBP22.29■■□□□ 1.16
SMN2-206ENST00000506734 PRR5LQ6MZQ0 368 aa22.29■■□□□ 1.16
SMN2-206ENST00000506734 FLAD1Q8NFF5 587 aa22.29■■□□□ 1.16
SMN2-206ENST00000506734 CELF1Q92879 486 aaKnown RBP22.29■■□□□ 1.16
SMN2-206ENST00000506734 MAP4K1Q92918 833 aa22.29■■□□□ 1.16
SMN2-206ENST00000506734 KCNB2Q92953 911 aa22.29■■□□□ 1.16
SMN2-206ENST00000506734 K7ELQ4 463 aaPredicted RBP22.29■■□□□ 1.16
SMN2-206ENST00000506734 ST18O60284 1047 aa22.29■■□□□ 1.16
SMN2-206ENST00000506734 RPS8P62241 208 aaKnown RBP22.29■■□□□ 1.16
SMN2-206ENST00000506734 FKBP4Q02790 459 aaKnown RBP eCLIP22.29■■□□□ 1.16
SMN2-206ENST00000506734 ANTXR1Q9H6X2 564 aa22.29■■□□□ 1.16
SMN2-206ENST00000506734 HELLSQ9NRZ9 838 aa22.29■■□□□ 1.16
SMN2-206ENST00000506734 SERPINB2P05120 415 aa22.28■■□□□ 1.16
SMN2-206ENST00000506734 ZAP70P43403 619 aa22.28■■□□□ 1.16
SMN2-206ENST00000506734 PHKA1P46020 1223 aa22.28■■□□□ 1.16
SMN2-206ENST00000506734 MCMDC2Q4G0Z9 681 aa22.28■■□□□ 1.16
SMN2-206ENST00000506734 ZNF589Q86UQ0 364 aaPredicted RBP22.28■■□□□ 1.16
SMN2-206ENST00000506734 MINPP1Q9UNW1 487 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms