RNA–Protein interactions for RNA: ENST00000506626.1

SMAD1-205, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-205ENST00000506626 SWI5Q1ZZU3 235 aa6.72□□□□□ -1.33
SMAD1-205ENST00000506626 COX20Q5RI15 118 aa6.72□□□□□ -1.33
SMAD1-205ENST00000506626 HFE2Q6ZVN8 426 aa6.72□□□□□ -1.33
SMAD1-205ENST00000506626 DZIP1LQ8IYY4 767 aaKnown RBP6.72□□□□□ -1.33
SMAD1-205ENST00000506626 CMTR1Q8N1G2 835 aaKnown RBP6.72□□□□□ -1.33
SMAD1-205ENST00000506626 PRIMPOLQ96LW4 560 aa6.72□□□□□ -1.33
SMAD1-205ENST00000506626 RNF114Q9Y508 228 aa6.72□□□□□ -1.33
SMAD1-205ENST00000506626 MED26O95402 600 aa6.71□□□□□ -1.34
SMAD1-205ENST00000506626 ZMIZ1Q9ULJ6 1067 aa6.71□□□□□ -1.34
SMAD1-205ENST00000506626 KCNMB2Q9Y691 235 aa6.71□□□□□ -1.34
SMAD1-205ENST00000506626 PRMT3O60678 531 aa6.7□□□□□ -1.34
SMAD1-205ENST00000506626 DEAF1O75398 565 aaPredicted RBP6.7□□□□□ -1.34
SMAD1-205ENST00000506626 GP2P55259 537 aaKnown RBP6.7□□□□□ -1.34
SMAD1-205ENST00000506626 OCLNQ16625 522 aa6.7□□□□□ -1.34
SMAD1-205ENST00000506626 PLD4Q96BZ4 506 aa6.7□□□□□ -1.34
SMAD1-205ENST00000506626 MMP20O60882 483 aa6.69□□□□□ -1.34
SMAD1-205ENST00000506626 PSAPP07602 524 aa6.69□□□□□ -1.34
SMAD1-205ENST00000506626 HOXD8P13378 290 aaPredicted RBP6.69□□□□□ -1.34
SMAD1-205ENST00000506626 SOX18P35713 384 aa6.69□□□□□ -1.34
SMAD1-205ENST00000506626 ELOAQ14241 798 aaKnown RBP6.69□□□□□ -1.34
SMAD1-205ENST00000506626 IGF2-ASQ6U949 168 aa6.69□□□□□ -1.34
SMAD1-205ENST00000506626 SAP130Q9H0E3 1048 aa6.69□□□□□ -1.34
SMAD1-205ENST00000506626 LOC102724428A0A0B4J2F2 783 aa6.68□□□□□ -1.34
SMAD1-205ENST00000506626 J3QW42 95 aa6.68□□□□□ -1.34
SMAD1-205ENST00000506626 GHRHP01286 108 aa6.68□□□□□ -1.34
SMAD1-205ENST00000506626 SIK1P57059 783 aa6.68□□□□□ -1.34
SMAD1-205ENST00000506626 FAM69CQ0P6D2 419 aa6.68□□□□□ -1.34
SMAD1-205ENST00000506626 TRIP4Q15650 581 aaPredicted RBP6.68□□□□□ -1.34
SMAD1-205ENST00000506626 C16orf46Q6P387 395 aa6.68□□□□□ -1.34
SMAD1-205ENST00000506626 ETFBKMTQ8IXQ9 262 aa6.68□□□□□ -1.34
SMAD1-205ENST00000506626 STK32AQ8WU08 396 aa6.68□□□□□ -1.34
SMAD1-205ENST00000506626 NSUN5Q96P11 429 aaKnown RBP6.68□□□□□ -1.34
SMAD1-205ENST00000506626 DLL1O00548 723 aa6.67□□□□□ -1.34
SMAD1-205ENST00000506626 BRD2P25440 801 aaKnown RBP6.67□□□□□ -1.34
SMAD1-205ENST00000506626 FAM26DQ5JW98 314 aa6.67□□□□□ -1.34
SMAD1-205ENST00000506626 COL26A1Q96A83 441 aa6.67□□□□□ -1.34
SMAD1-205ENST00000506626 TNFRSF10BO14763 440 aa6.66□□□□□ -1.34
SMAD1-205ENST00000506626 ADAMTS4O75173 837 aa6.66□□□□□ -1.34
SMAD1-205ENST00000506626 JAG1P78504 1218 aa6.66□□□□□ -1.34
SMAD1-205ENST00000506626 GDF6Q6KF10 455 aaPredicted RBP6.66□□□□□ -1.34
SMAD1-205ENST00000506626 NLRP13Q86W25 1043 aa6.66□□□□□ -1.34
SMAD1-205ENST00000506626 RBSNQ9H1K0 784 aa6.66□□□□□ -1.34
SMAD1-205ENST00000506626 CXXC1Q9P0U4 656 aaPredicted RBP6.66□□□□□ -1.34
SMAD1-205ENST00000506626 Q6ZS46 218 aa6.65□□□□□ -1.34
SMAD1-205ENST00000506626 IL22RA1Q8N6P7 574 aa6.65□□□□□ -1.34
SMAD1-205ENST00000506626 MKNK1Q9BUB5 465 aa6.65□□□□□ -1.34
SMAD1-205ENST00000506626 AKTIPQ9H8T0 292 aa6.65□□□□□ -1.34
SMAD1-205ENST00000506626 SRA1Q9HD15 236 aaKnown RBP6.65□□□□□ -1.34
SMAD1-205ENST00000506626 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.64□□□□□ -1.35
SMAD1-205ENST00000506626 UBAP1LF5GYI3 381 aa6.64□□□□□ -1.35
SMAD1-205ENST00000506626 TGFB1P01137 390 aa6.64□□□□□ -1.35
SMAD1-205ENST00000506626 SPINK2P20155 84 aa6.64□□□□□ -1.35
SMAD1-205ENST00000506626 SRPK2P78362 688 aaKnown RBP6.64□□□□□ -1.35
SMAD1-205ENST00000506626 CAPN12Q6ZSI9 719 aa6.64□□□□□ -1.35
SMAD1-205ENST00000506626 MRPL18Q9H0U6 180 aaKnown RBP6.64□□□□□ -1.35
SMAD1-205ENST00000506626 FAM13BQ9NYF5 915 aa6.64□□□□□ -1.35
SMAD1-205ENST00000506626 TRIM33Q9UPN9 1127 aa6.64□□□□□ -1.35
SMAD1-205ENST00000506626 ATG7O95352 703 aa6.63□□□□□ -1.35
SMAD1-205ENST00000506626 SETDB1Q15047 1291 aa6.63□□□□□ -1.35
SMAD1-205ENST00000506626 TMEM164Q5U3C3 297 aa6.63□□□□□ -1.35
SMAD1-205ENST00000506626 MAP4K3Q8IVH8 894 aa6.63□□□□□ -1.35
SMAD1-205ENST00000506626 OR13H1Q8NG92 308 aa6.63□□□□□ -1.35
SMAD1-205ENST00000506626 PIK3R5Q8WYR1 880 aa6.63□□□□□ -1.35
SMAD1-205ENST00000506626 F8W735 103 aaPredicted RBP6.62□□□□□ -1.35
SMAD1-205ENST00000506626 PTCD1O75127 700 aaKnown RBP6.62□□□□□ -1.35
SMAD1-205ENST00000506626 ALX3O95076 343 aa6.62□□□□□ -1.35
SMAD1-205ENST00000506626 IGLV1-40P01703 118 aa6.62□□□□□ -1.35
SMAD1-205ENST00000506626 ZAP70P43403 619 aa6.62□□□□□ -1.35
SMAD1-205ENST00000506626 NAA30Q147X3 362 aaPredicted RBP6.62□□□□□ -1.35
SMAD1-205ENST00000506626 CACTIN-AS1Q8N1I8 211 aa6.62□□□□□ -1.35
SMAD1-205ENST00000506626 TMEM130Q8N3G9 435 aa6.62□□□□□ -1.35
SMAD1-205ENST00000506626 DCAF11Q8TEB1 546 aa6.62□□□□□ -1.35
SMAD1-205ENST00000506626 GSC2O15499 205 aa6.61□□□□□ -1.35
SMAD1-205ENST00000506626 COL13A1Q5TAT6 717 aaPredicted RBP6.61□□□□□ -1.35
SMAD1-205ENST00000506626 CLP1Q92989 425 aaKnown RBP6.61□□□□□ -1.35
SMAD1-205ENST00000506626 MUC3BQ9H195 1237 aa6.61□□□□□ -1.35
SMAD1-205ENST00000506626 ATP11AP98196 1134 aa6.6□□□□□ -1.35
SMAD1-205ENST00000506626 HYAL2Q12891 473 aa6.6□□□□□ -1.35
SMAD1-205ENST00000506626 ZDHHC13Q8IUH4 622 aa6.6□□□□□ -1.35
SMAD1-205ENST00000506626 GPR152Q8TDT2 470 aa6.6□□□□□ -1.35
SMAD1-205ENST00000506626 STIM2Q9P246 746 aa6.6□□□□□ -1.35
SMAD1-205ENST00000506626 FNDC3AQ9Y2H6 1198 aaKnown RBP6.6□□□□□ -1.35
SMAD1-205ENST00000506626 LCE4AQ5TA78 99 aa6.59□□□□□ -1.35
SMAD1-205ENST00000506626 ABTB2Q8N961 1025 aa6.59□□□□□ -1.35
SMAD1-205ENST00000506626 SPACA7Q96KW9 195 aa6.59□□□□□ -1.35
SMAD1-205ENST00000506626 RAXQ9Y2V3 346 aa6.59□□□□□ -1.35
SMAD1-205ENST00000506626 PPME1Q9Y570 386 aa6.59□□□□□ -1.35
SMAD1-205ENST00000506626 ZBTB39O15060 712 aa6.58□□□□□ -1.36
SMAD1-205ENST00000506626 SMNDC1O75940 238 aaKnown RBP eCLIP6.58□□□□□ -1.36
SMAD1-205ENST00000506626 KIF4AO95239 1232 aa6.58□□□□□ -1.36
SMAD1-205ENST00000506626 GLB1P16278 677 aa6.58□□□□□ -1.36
SMAD1-205ENST00000506626 TTC39BQ5VTQ0 682 aaPredicted RBP6.58□□□□□ -1.36
SMAD1-205ENST00000506626 CEP135Q66GS9 1140 aa6.58□□□□□ -1.36
SMAD1-205ENST00000506626 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.58□□□□□ -1.36
SMAD1-205ENST00000506626 DTX1Q86Y01 620 aa6.58□□□□□ -1.36
SMAD1-205ENST00000506626 AGGF1Q8N302 714 aaeCLIP6.58□□□□□ -1.36
SMAD1-205ENST00000506626 GALNT11Q8NCW6 608 aa6.58□□□□□ -1.36
SMAD1-205ENST00000506626 ABI2Q9NYB9 513 aaPredicted RBP6.58□□□□□ -1.36
SMAD1-205ENST00000506626 ADGRE2Q9UHX3 823 aa6.58□□□□□ -1.36
SMAD1-205ENST00000506626 LINC01387J3KSC0 135 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms