RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 UBTFL1P0CB47 393 aaPredicted RBP20.96■□□□□ 0.95
SNCA-209ENST00000506244 WASHC4Q2M389 1173 aa20.96■□□□□ 0.95
SNCA-209ENST00000506244 TBC1D16Q8TBP0 767 aa20.96■□□□□ 0.95
SNCA-209ENST00000506244 BICC1Q9H694 974 aaKnown RBP20.96■□□□□ 0.95
SNCA-209ENST00000506244 NMRK2Q9NPI5 230 aa20.96■□□□□ 0.95
SNCA-209ENST00000506244 COL4A5P29400 1685 aa20.96■□□□□ 0.95
SNCA-209ENST00000506244 RABL6Q3YEC7 729 aaPredicted RBP20.95■□□□□ 0.94
SNCA-209ENST00000506244 EPHA10Q5JZY3 1008 aa20.95■□□□□ 0.94
SNCA-209ENST00000506244 INTS3Q68E01 1043 aaKnown RBP20.95■□□□□ 0.94
SNCA-209ENST00000506244 C16orf71Q8IYS4 520 aaPredicted RBP20.95■□□□□ 0.94
SNCA-209ENST00000506244 ANKRD2Q9GZV1 360 aa20.95■□□□□ 0.94
SNCA-209ENST00000506244 MINPP1Q9UNW1 487 aa20.95■□□□□ 0.94
SNCA-209ENST00000506244 ZNF541Q9H0D2 1346 aa20.95■□□□□ 0.94
SNCA-209ENST00000506244 KIF3CO14782 793 aa20.94■□□□□ 0.94
SNCA-209ENST00000506244 ATP2B4P23634 1241 aa20.94■□□□□ 0.94
SNCA-209ENST00000506244 FTSJ3Q8IY81 847 aaKnown RBP20.94■□□□□ 0.94
SNCA-209ENST00000506244 GPC2Q8N158 579 aa20.94■□□□□ 0.94
SNCA-209ENST00000506244 POLLQ9UGP5 575 aa20.94■□□□□ 0.94
SNCA-209ENST00000506244 ZNRF3Q9ULT6 936 aa20.94■□□□□ 0.94
SNCA-209ENST00000506244 IQCA1LA6NCM1 817 aa20.93■□□□□ 0.94
SNCA-209ENST00000506244 VEGFAP15692 232 aaPredicted RBP20.93■□□□□ 0.94
SNCA-209ENST00000506244 KAZALD1Q96I82 304 aa20.93■□□□□ 0.94
SNCA-209ENST00000506244 L3MBTL3Q96JM7 780 aaPredicted RBP20.93■□□□□ 0.94
SNCA-209ENST00000506244 ZC3H12CQ9C0D7 883 aaKnown RBP20.93■□□□□ 0.94
SNCA-209ENST00000506244 DDNO94850 711 aaPredicted RBP20.92■□□□□ 0.94
SNCA-209ENST00000506244 GNAI3P08754 354 aa20.92■□□□□ 0.94
SNCA-209ENST00000506244 RRAGCQ9HB90 399 aa20.92■□□□□ 0.94
SNCA-209ENST00000506244 SCN4AP35499 1836 aa20.92■□□□□ 0.94
SNCA-209ENST00000506244 ANKRD44Q8N8A2 993 aa20.91■□□□□ 0.94
SNCA-209ENST00000506244 MED23Q9ULK4 1368 aa20.91■□□□□ 0.94
SNCA-209ENST00000506244 LEMD3Q9Y2U8 911 aa20.91■□□□□ 0.94
SNCA-209ENST00000506244 G3V3G9 751 aa20.9■□□□□ 0.94
SNCA-209ENST00000506244 TOMM70O94826 608 aa20.9■□□□□ 0.94
SNCA-209ENST00000506244 DCAF8Q5TAQ9 597 aa20.9■□□□□ 0.94
SNCA-209ENST00000506244 LDHAL6AQ6ZMR3 332 aa20.9■□□□□ 0.94
SNCA-209ENST00000506244 CLUAP1Q96AJ1 413 aa20.9■□□□□ 0.94
SNCA-209ENST00000506244 CNNM1Q9NRU3 951 aa20.9■□□□□ 0.94
SNCA-209ENST00000506244 RIMBP2O15034 1052 aa20.89■□□□□ 0.93
SNCA-209ENST00000506244 MS4A1P11836 297 aa20.89■□□□□ 0.93
SNCA-209ENST00000506244 KCNJ4P48050 445 aa20.89■□□□□ 0.93
SNCA-209ENST00000506244 CHRNDQ07001 517 aa20.89■□□□□ 0.93
SNCA-209ENST00000506244 MEIS3Q99687 375 aa20.89■□□□□ 0.93
SNCA-209ENST00000506244 RCAN3Q9UKA8 241 aa20.89■□□□□ 0.93
SNCA-209ENST00000506244 GJA3Q9Y6H8 435 aa20.89■□□□□ 0.93
SNCA-209ENST00000506244 A0A1B0GUL6 1792 aa20.88■□□□□ 0.93
SNCA-209ENST00000506244 ECE2O60344 883 aa20.88■□□□□ 0.93
SNCA-209ENST00000506244 LMOD1P29536 600 aaPredicted RBP20.88■□□□□ 0.93
SNCA-209ENST00000506244 C1QTNF8P60827 252 aa20.88■□□□□ 0.93
SNCA-209ENST00000506244 TNIP1Q15025 636 aa20.88■□□□□ 0.93
SNCA-209ENST00000506244 CIAPIN1Q6FI81 312 aa20.88■□□□□ 0.93
SNCA-209ENST00000506244 DZIP1LQ8IYY4 767 aaKnown RBP20.88■□□□□ 0.93
SNCA-209ENST00000506244 ZNF804BA4D1E1 1349 aa20.87■□□□□ 0.93
SNCA-209ENST00000506244 RBM46Q8TBY0 533 aaKnown RBP20.87■□□□□ 0.93
SNCA-209ENST00000506244 ZNF594Q96JF6 807 aaPredicted RBP20.87■□□□□ 0.93
SNCA-209ENST00000506244 GPR101Q96P66 508 aaPredicted RBP20.87■□□□□ 0.93
SNCA-209ENST00000506244 DBNDD1Q9H9R9 158 aa20.87■□□□□ 0.93
SNCA-209ENST00000506244 HACL1Q9UJ83 578 aa20.87■□□□□ 0.93
SNCA-209ENST00000506244 LRRFIP2Q9Y608 721 aaKnown RBP20.87■□□□□ 0.93
SNCA-209ENST00000506244 CXCL9Q07325 125 aa20.86■□□□□ 0.93
SNCA-209ENST00000506244 TMEM57Q8N5G2 664 aa20.86■□□□□ 0.93
SNCA-209ENST00000506244 MROH5Q6ZUA9 1318 aa20.85■□□□□ 0.93
SNCA-209ENST00000506244 ITPRIPQ8IWB1 547 aa20.85■□□□□ 0.93
SNCA-209ENST00000506244 TNNQ9UQP3 1299 aa20.85■□□□□ 0.93
SNCA-209ENST00000506244 YDJCA8MPS7 323 aa20.84■□□□□ 0.93
SNCA-209ENST00000506244 POTECB2RU33 542 aa20.84■□□□□ 0.93
SNCA-209ENST00000506244 RAD17O75943 681 aa20.84■□□□□ 0.93
SNCA-209ENST00000506244 DOK7Q18PE1 504 aa20.84■□□□□ 0.93
SNCA-209ENST00000506244 YTHDC1Q96MU7 727 aaKnown RBP20.84■□□□□ 0.93
SNCA-209ENST00000506244 GNAI2P04899 355 aa20.83■□□□□ 0.93
SNCA-209ENST00000506244 PODNQ7Z5L7 613 aa20.83■□□□□ 0.93
SNCA-209ENST00000506244 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.83■□□□□ 0.93
SNCA-209ENST00000506244 SMC1BQ8NDV3 1235 aa20.83■□□□□ 0.93
SNCA-209ENST00000506244 COA1Q9GZY4 146 aa20.83■□□□□ 0.93
SNCA-209ENST00000506244 FSTL1Q12841 308 aa20.82■□□□□ 0.92
SNCA-209ENST00000506244 PNMA8AQ86V59 439 aaPredicted RBP20.82■□□□□ 0.92
SNCA-209ENST00000506244 TAF1DQ9H5J8 278 aaPredicted RBP20.82■□□□□ 0.92
SNCA-209ENST00000506244 FBXO3Q9UK99 471 aa20.82■□□□□ 0.92
SNCA-209ENST00000506244 PSME4Q14997 1843 aa20.81■□□□□ 0.92
SNCA-209ENST00000506244 TAF5LO75529 589 aa20.81■□□□□ 0.92
SNCA-209ENST00000506244 RPS12P25398 132 aaKnown RBP20.81■□□□□ 0.92
SNCA-209ENST00000506244 EPHX2P34913 555 aa20.81■□□□□ 0.92
SNCA-209ENST00000506244 SCNN1DP51172 638 aa20.81■□□□□ 0.92
SNCA-209ENST00000506244 METTL24Q5JXM2 366 aa20.81■□□□□ 0.92
SNCA-209ENST00000506244 C15orf52Q6ZUT6 534 aaKnown RBP20.81■□□□□ 0.92
SNCA-209ENST00000506244 HELBQ8NG08 1087 aaPredicted RBP20.81■□□□□ 0.92
SNCA-209ENST00000506244 ZNF609O15014 1411 aa20.8■□□□□ 0.92
SNCA-209ENST00000506244 PSMD14O00487 310 aa20.8■□□□□ 0.92
SNCA-209ENST00000506244 PLIN1O60240 522 aa20.8■□□□□ 0.92
SNCA-209ENST00000506244 GMPSP49915 693 aaPredicted RBP20.8■□□□□ 0.92
SNCA-209ENST00000506244 MTX1Q13505 466 aa20.8■□□□□ 0.92
SNCA-209ENST00000506244 UBE4AQ14139 1066 aa20.8■□□□□ 0.92
SNCA-209ENST00000506244 ZNF804AQ7Z570 1209 aa20.8■□□□□ 0.92
SNCA-209ENST00000506244 PUS3Q9BZE2 481 aaKnown RBP20.8■□□□□ 0.92
SNCA-209ENST00000506244 GPRC5DQ9NZD1 345 aa20.8■□□□□ 0.92
SNCA-209ENST00000506244 RIPOR2Q9Y4F9 1068 aa20.8■□□□□ 0.92
SNCA-209ENST00000506244 RLBP1P12271 317 aa20.79■□□□□ 0.92
SNCA-209ENST00000506244 RFX5P48382 616 aaPredicted RBP20.79■□□□□ 0.92
SNCA-209ENST00000506244 LDHDQ86WU2 507 aa20.79■□□□□ 0.92
SNCA-209ENST00000506244 SCN9AQ15858 1988 aa20.79■□□□□ 0.92
SNCA-209ENST00000506244 EYA2O00167 538 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms