RNA–Protein interactions for RNA: ENST00000506223.1

SMAD5-201, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-201ENST00000506223 RGPD5Q99666 1765 aa9.03□□□□□ -0.96
SMAD5-201ENST00000506223 PCNTO95613 3336 aa9.03□□□□□ -0.96
SMAD5-201ENST00000506223 KAT6BQ8WYB5 2073 aa9.03□□□□□ -0.96
SMAD5-201ENST00000506223 BTAF1O14981 1849 aa9.03□□□□□ -0.96
SMAD5-201ENST00000506223 EIF3AQ14152 1382 aaKnown RBP9.02□□□□□ -0.97
SMAD5-201ENST00000506223 ZBTB7CA1YPR0 619 aa9.02□□□□□ -0.97
SMAD5-201ENST00000506223 FSHRP23945 695 aa9.02□□□□□ -0.97
SMAD5-201ENST00000506223 ATP1A2P50993 1020 aa9.02□□□□□ -0.97
SMAD5-201ENST00000506223 PRELPP51888 382 aa9.02□□□□□ -0.97
SMAD5-201ENST00000506223 CLDN10P78369 228 aa9.02□□□□□ -0.97
SMAD5-201ENST00000506223 TMEM164Q5U3C3 297 aa9.02□□□□□ -0.97
SMAD5-201ENST00000506223 ZNF594Q96JF6 807 aaPredicted RBP9.02□□□□□ -0.97
SMAD5-201ENST00000506223 DNAAF2Q9NVR5 837 aaKnown RBP9.02□□□□□ -0.97
SMAD5-201ENST00000506223 COL18A1P39060 1754 aa9.01□□□□□ -0.97
SMAD5-201ENST00000506223 ERVH48-1M5A8F1 160 aa9.01□□□□□ -0.97
SMAD5-201ENST00000506223 WASLO00401 505 aaPredicted RBP9.01□□□□□ -0.97
SMAD5-201ENST00000506223 SIAH2O43255 324 aa9.01□□□□□ -0.97
SMAD5-201ENST00000506223 GRIN3BO60391 1043 aa9.01□□□□□ -0.97
SMAD5-201ENST00000506223 GTF2IP78347 998 aa9.01□□□□□ -0.97
SMAD5-201ENST00000506223 USP4Q13107 963 aa9.01□□□□□ -0.97
SMAD5-201ENST00000506223 SPRYD7Q5W111 196 aa9.01□□□□□ -0.97
SMAD5-201ENST00000506223 AEBP1Q8IUX7 1158 aa9.01□□□□□ -0.97
SMAD5-201ENST00000506223 MPNDQ8N594 471 aa9.01□□□□□ -0.97
SMAD5-201ENST00000506223 WDR90Q96KV7 1748 aa9.01□□□□□ -0.97
SMAD5-201ENST00000506223 MRGPRX2Q96LB1 330 aa9.01□□□□□ -0.97
SMAD5-201ENST00000506223 USP19O94966 1318 aa9.01□□□□□ -0.97
SMAD5-201ENST00000506223 GRM5P41594 1212 aa9□□□□□ -0.97
SMAD5-201ENST00000506223 NEUROD1Q13562 356 aa9□□□□□ -0.97
SMAD5-201ENST00000506223 ANKMY2Q8IV38 441 aa9□□□□□ -0.97
SMAD5-201ENST00000506223 ADGRB1O14514 1584 aa8.99□□□□□ -0.97
SMAD5-201ENST00000506223 ADH1CP00326 375 aa8.99□□□□□ -0.97
SMAD5-201ENST00000506223 MYCP01106 439 aaPredicted RBP8.99□□□□□ -0.97
SMAD5-201ENST00000506223 POLD1P28340 1107 aa8.99□□□□□ -0.97
SMAD5-201ENST00000506223 ZNF697Q5TEC3 545 aa8.99□□□□□ -0.97
SMAD5-201ENST00000506223 TNS4Q8IZW8 715 aa8.99□□□□□ -0.97
SMAD5-201ENST00000506223 LARGE2Q8N3Y3 721 aa8.99□□□□□ -0.97
SMAD5-201ENST00000506223 FAM200AQ8TCP9 573 aa8.99□□□□□ -0.97
SMAD5-201ENST00000506223 LRRC4BQ9NT99 713 aa8.99□□□□□ -0.97
SMAD5-201ENST00000506223 PODXL2Q9NZ53 605 aa8.99□□□□□ -0.97
SMAD5-201ENST00000506223 KIAA1024Q9UPX6 916 aa8.99□□□□□ -0.97
SMAD5-201ENST00000506223 ARHGEF28Q8N1W1 1705 aaKnown RBP8.98□□□□□ -0.97
SMAD5-201ENST00000506223 BRD1O95696 1058 aa8.98□□□□□ -0.97
SMAD5-201ENST00000506223 GCP02774 474 aa8.98□□□□□ -0.97
SMAD5-201ENST00000506223 SCTRP47872 440 aa8.98□□□□□ -0.97
SMAD5-201ENST00000506223 DHX9Q08211 1270 aaKnown RBP8.98□□□□□ -0.97
SMAD5-201ENST00000506223 DPYDQ12882 1025 aa8.98□□□□□ -0.97
SMAD5-201ENST00000506223 TOM1L2Q6ZVM7 507 aa8.98□□□□□ -0.97
SMAD5-201ENST00000506223 SIX5Q8N196 739 aa8.98□□□□□ -0.97
SMAD5-201ENST00000506223 ABTB2Q8N961 1025 aa8.98□□□□□ -0.97
SMAD5-201ENST00000506223 NUDT16Q96DE0 195 aaKnown RBP8.98□□□□□ -0.97
SMAD5-201ENST00000506223 ACSBG1Q96GR2 724 aa8.98□□□□□ -0.97
SMAD5-201ENST00000506223 PCDHGA11Q9Y5H2 935 aa8.98□□□□□ -0.97
SMAD5-201ENST00000506223 PNPLA7Q6ZV29 1317 aa8.98□□□□□ -0.97
SMAD5-201ENST00000506223 ZBTB7BO15156 539 aaPredicted RBP8.97□□□□□ -0.97
SMAD5-201ENST00000506223 NR5A1Q13285 461 aa8.97□□□□□ -0.97
SMAD5-201ENST00000506223 ZNF598Q86UK7 904 aaKnown RBP8.97□□□□□ -0.97
SMAD5-201ENST00000506223 SLC16A10Q8TF71 515 aa8.97□□□□□ -0.97
SMAD5-201ENST00000506223 PRKD2Q9BZL6 878 aa8.97□□□□□ -0.97
SMAD5-201ENST00000506223 TMPRSS4Q9NRS4 437 aa8.97□□□□□ -0.97
SMAD5-201ENST00000506223 ACEP12821 1306 aa8.97□□□□□ -0.97
SMAD5-201ENST00000506223 POLR3AO14802 1390 aaPredicted RBP8.97□□□□□ -0.97
SMAD5-201ENST00000506223 ERVK-9P63128 1117 aa8.96□□□□□ -0.98
SMAD5-201ENST00000506223 HTRA3P83110 453 aa8.96□□□□□ -0.98
SMAD5-201ENST00000506223 FOXC1Q12948 553 aa8.96□□□□□ -0.98
SMAD5-201ENST00000506223 CCDC102BQ68D86 513 aa8.96□□□□□ -0.98
SMAD5-201ENST00000506223 CC2D2BQ6DHV5 1058 aa8.96□□□□□ -0.98
SMAD5-201ENST00000506223 CCDC116Q8IYX3 515 aa8.96□□□□□ -0.98
SMAD5-201ENST00000506223 TPCN2Q8NHX9 752 aa8.96□□□□□ -0.98
SMAD5-201ENST00000506223 RBM19Q9Y4C8 960 aaKnown RBP8.96□□□□□ -0.98
SMAD5-201ENST00000506223 DKK1O94907 266 aa8.95□□□□□ -0.98
SMAD5-201ENST00000506223 CYLDQ9NQC7 956 aa8.95□□□□□ -0.98
SMAD5-201ENST00000506223 V9GY48 417 aaPredicted RBP8.95□□□□□ -0.98
SMAD5-201ENST00000506223 WDR17Q8IZU2 1322 aa8.95□□□□□ -0.98
SMAD5-201ENST00000506223 TNS2Q63HR2 1409 aa8.95□□□□□ -0.98
SMAD5-201ENST00000506223 ALDH1A1P00352 501 aa8.94□□□□□ -0.98
SMAD5-201ENST00000506223 NR3C2P08235 984 aa8.94□□□□□ -0.98
SMAD5-201ENST00000506223 PPP1R26Q5T8A7 1209 aaPredicted RBP8.94□□□□□ -0.98
SMAD5-201ENST00000506223 B4GALNT3Q6L9W6 998 aa8.94□□□□□ -0.98
SMAD5-201ENST00000506223 JMYQ8N9B5 988 aa8.94□□□□□ -0.98
SMAD5-201ENST00000506223 PKD2L1Q9P0L9 805 aa8.94□□□□□ -0.98
SMAD5-201ENST00000506223 BRD4O60885 1362 aaPredicted RBP8.94□□□□□ -0.98
SMAD5-201ENST00000506223 USP6P35125 1406 aa8.94□□□□□ -0.98
SMAD5-201ENST00000506223 SLIT3O75094 1523 aa8.94□□□□□ -0.98
SMAD5-201ENST00000506223 PATL2C9JE40 543 aaKnown RBP8.93□□□□□ -0.98
SMAD5-201ENST00000506223 EXOC5O00471 708 aa8.93□□□□□ -0.98
SMAD5-201ENST00000506223 SEC13P55735 322 aa8.93□□□□□ -0.98
SMAD5-201ENST00000506223 KCNQ4P56696 695 aa8.93□□□□□ -0.98
SMAD5-201ENST00000506223 KCNA1Q09470 495 aa8.93□□□□□ -0.98
SMAD5-201ENST00000506223 SWI5Q1ZZU3 235 aa8.93□□□□□ -0.98
SMAD5-201ENST00000506223 NLRP13Q86W25 1043 aa8.93□□□□□ -0.98
SMAD5-201ENST00000506223 L3MBTL2Q969R5 705 aa8.93□□□□□ -0.98
SMAD5-201ENST00000506223 KLRG1Q96E93 195 aa8.93□□□□□ -0.98
SMAD5-201ENST00000506223 SIN3AQ96ST3 1273 aa8.93□□□□□ -0.98
SMAD5-201ENST00000506223 CENPJQ9HC77 1338 aaPredicted RBP8.93□□□□□ -0.98
SMAD5-201ENST00000506223 ROCK2O75116 1388 aaKnown RBP8.93□□□□□ -0.98
SMAD5-201ENST00000506223 TONSLQ96HA7 1378 aa8.93□□□□□ -0.98
SMAD5-201ENST00000506223 ABCC6O95255 1503 aa8.93□□□□□ -0.98
SMAD5-201ENST00000506223 TRPM1Q7Z4N2 1603 aa8.93□□□□□ -0.98
SMAD5-201ENST00000506223 KIAA1210Q9ULL0 1709 aa8.93□□□□□ -0.98
SMAD5-201ENST00000506223 SFI1A8K8P3 1242 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms