RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 MAP4K4O95819 1239 aaPredicted RBP9.76□□□□□ -0.85
COL4A5-208ENST00000505728 YBX3P16989 372 aaKnown RBP eCLIP9.76□□□□□ -0.85
COL4A5-208ENST00000505728 ITGA6P23229 1130 aa9.76□□□□□ -0.85
COL4A5-208ENST00000505728 ANAPC15P60006 121 aa9.76□□□□□ -0.85
COL4A5-208ENST00000505728 SYNE4Q8N205 404 aa9.76□□□□□ -0.85
COL4A5-208ENST00000505728 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.76□□□□□ -0.85
COL4A5-208ENST00000505728 IL17RAQ96F46 866 aa9.76□□□□□ -0.85
COL4A5-208ENST00000505728 DBNDD2Q9BQY9 259 aa9.76□□□□□ -0.85
COL4A5-208ENST00000505728 ANP32EQ9BTT0 268 aa9.76□□□□□ -0.85
COL4A5-208ENST00000505728 PUS3Q9BZE2 481 aaKnown RBP9.76□□□□□ -0.85
COL4A5-208ENST00000505728 BOLA2Q9H3K6 86 aa9.76□□□□□ -0.85
COL4A5-208ENST00000505728 DIAPH3Q9NSV4 1193 aa9.76□□□□□ -0.85
COL4A5-208ENST00000505728 TLR7Q9NYK1 1049 aaKnown RBP9.76□□□□□ -0.85
COL4A5-208ENST00000505728 NIP7Q9Y221 180 aaKnown RBP eCLIP9.76□□□□□ -0.85
COL4A5-208ENST00000505728 RTCBQ9Y3I0 505 aaKnown RBP9.76□□□□□ -0.85
COL4A5-208ENST00000505728 RIPOR2Q9Y4F9 1068 aa9.76□□□□□ -0.85
COL4A5-208ENST00000505728 NTSR2O95665 410 aa9.75□□□□□ -0.85
COL4A5-208ENST00000505728 LDHAL6AQ6ZMR3 332 aa9.75□□□□□ -0.85
COL4A5-208ENST00000505728 KIAA1211Q6ZU35 1233 aa9.75□□□□□ -0.85
COL4A5-208ENST00000505728 SMIM5Q71RC9 77 aa9.75□□□□□ -0.85
COL4A5-208ENST00000505728 NEUROD6Q96NK8 337 aa9.75□□□□□ -0.85
COL4A5-208ENST00000505728 HAUS7Q99871 368 aa9.75□□□□□ -0.85
COL4A5-208ENST00000505728 GREM2Q9H772 168 aa9.75□□□□□ -0.85
COL4A5-208ENST00000505728 RAD50Q92878 1312 aa9.75□□□□□ -0.85
COL4A5-208ENST00000505728 BCORQ6W2J9 1755 aa9.75□□□□□ -0.85
COL4A5-208ENST00000505728 RFX7Q2KHR2 1363 aa9.75□□□□□ -0.85
COL4A5-208ENST00000505728 A0A1B0GUL7 405 aa9.74□□□□□ -0.85
COL4A5-208ENST00000505728 ZPR1O75312 459 aa9.74□□□□□ -0.85
COL4A5-208ENST00000505728 C1QTNF8P60827 252 aa9.74□□□□□ -0.85
COL4A5-208ENST00000505728 TIMM10P62072 90 aa9.74□□□□□ -0.85
COL4A5-208ENST00000505728 CCDC152Q4G0S7 254 aa9.74□□□□□ -0.85
COL4A5-208ENST00000505728 SLC10A5Q5PT55 438 aa9.74□□□□□ -0.85
COL4A5-208ENST00000505728 ANO2Q9NQ90 1003 aa9.74□□□□□ -0.85
COL4A5-208ENST00000505728 SNRKQ9NRH2 765 aa9.74□□□□□ -0.85
COL4A5-208ENST00000505728 RTL9Q8NET4 1388 aa9.74□□□□□ -0.85
COL4A5-208ENST00000505728 KIAA1551Q9HCM1 1747 aa9.73□□□□□ -0.85
COL4A5-208ENST00000505728 KIF13BQ9NQT8 1826 aa9.73□□□□□ -0.85
COL4A5-208ENST00000505728 GNPATO15228 680 aa9.73□□□□□ -0.85
COL4A5-208ENST00000505728 HCLS1P14317 486 aaPredicted RBP9.73□□□□□ -0.85
COL4A5-208ENST00000505728 HSPA4P34932 840 aa9.73□□□□□ -0.85
COL4A5-208ENST00000505728 SF3B3Q15393 1217 aaKnown RBP9.73□□□□□ -0.85
COL4A5-208ENST00000505728 METTL24Q5JXM2 366 aa9.73□□□□□ -0.85
COL4A5-208ENST00000505728 CCDC158Q5M9N0 1113 aa9.73□□□□□ -0.85
COL4A5-208ENST00000505728 TRAPPC3LQ5T215 181 aa9.73□□□□□ -0.85
COL4A5-208ENST00000505728 CWC27Q6UX04 472 aaKnown RBP9.73□□□□□ -0.85
COL4A5-208ENST00000505728 CCDC85AQ96PX6 553 aaPredicted RBP9.73□□□□□ -0.85
COL4A5-208ENST00000505728 FSD1Q9BTV5 496 aa9.73□□□□□ -0.85
COL4A5-208ENST00000505728 NYXQ9GZU5 481 aa9.73□□□□□ -0.85
COL4A5-208ENST00000505728 LSG1Q9H089 658 aaKnown RBP9.73□□□□□ -0.85
COL4A5-208ENST00000505728 CNNM1Q9NRU3 951 aa9.73□□□□□ -0.85
COL4A5-208ENST00000505728 MROH5Q6ZUA9 1318 aa9.73□□□□□ -0.85
COL4A5-208ENST00000505728 ZNF609O15014 1411 aa9.73□□□□□ -0.85
COL4A5-208ENST00000505728 FAM177BA6PVY3 158 aa9.72□□□□□ -0.85
COL4A5-208ENST00000505728 ST18O60284 1047 aa9.72□□□□□ -0.85
COL4A5-208ENST00000505728 IFIT1P09914 478 aaKnown RBP9.72□□□□□ -0.85
COL4A5-208ENST00000505728 ATP2B3Q16720 1220 aa9.72□□□□□ -0.85
COL4A5-208ENST00000505728 USPL1Q5W0Q7 1092 aa9.72□□□□□ -0.85
COL4A5-208ENST00000505728 ARHGEF1Q92888 912 aaKnown RBP9.72□□□□□ -0.85
COL4A5-208ENST00000505728 XAGE2Q96GT9 111 aa9.72□□□□□ -0.85
COL4A5-208ENST00000505728 ZNF512BQ96KM6 892 aaPredicted RBP9.72□□□□□ -0.85
COL4A5-208ENST00000505728 SETDB2Q96T68 719 aa9.72□□□□□ -0.85
COL4A5-208ENST00000505728 BCL2L12Q9HB09 334 aa9.72□□□□□ -0.85
COL4A5-208ENST00000505728 K7ELQ4 463 aaPredicted RBP9.71□□□□□ -0.86
COL4A5-208ENST00000505728 PDE8BO95263 885 aa9.71□□□□□ -0.86
COL4A5-208ENST00000505728 IGHMBP2P38935 993 aaKnown RBP9.71□□□□□ -0.86
COL4A5-208ENST00000505728 MCM2P49736 904 aa9.71□□□□□ -0.86
COL4A5-208ENST00000505728 NMIQ13287 307 aaPredicted RBP9.71□□□□□ -0.86
COL4A5-208ENST00000505728 LRRFIP1Q32MZ4 808 aaKnown RBP9.71□□□□□ -0.86
COL4A5-208ENST00000505728 GORABQ5T7V8 394 aa9.71□□□□□ -0.86
COL4A5-208ENST00000505728 TBC1D9BQ66K14 1250 aa9.71□□□□□ -0.86
COL4A5-208ENST00000505728 TPTE2Q6XPS3 522 aa9.71□□□□□ -0.86
COL4A5-208ENST00000505728 KBTBD3Q8NAB2 608 aa9.71□□□□□ -0.86
COL4A5-208ENST00000505728 KCNB2Q92953 911 aa9.71□□□□□ -0.86
COL4A5-208ENST00000505728 CDC5LQ99459 802 aaKnown RBP9.71□□□□□ -0.86
COL4A5-208ENST00000505728 MPHOSPH8Q99549 860 aa9.71□□□□□ -0.86
COL4A5-208ENST00000505728 IL25Q9H293 177 aa9.71□□□□□ -0.86
COL4A5-208ENST00000505728 ABCC12Q96J65 1359 aa9.71□□□□□ -0.86
COL4A5-208ENST00000505728 C4AP0C0L4 1744 aa9.7□□□□□ -0.86
COL4A5-208ENST00000505728 LAMB2P55268 1798 aa9.7□□□□□ -0.86
COL4A5-208ENST00000505728 SPEF2Q9C093 1822 aa9.7□□□□□ -0.86
COL4A5-208ENST00000505728 PHF14O94880 888 aa9.7□□□□□ -0.86
COL4A5-208ENST00000505728 GTF2E1P29083 439 aaPredicted RBP9.7□□□□□ -0.86
COL4A5-208ENST00000505728 RFC4P35249 363 aa9.7□□□□□ -0.86
COL4A5-208ENST00000505728 ERFEQ4G0M1 354 aa9.7□□□□□ -0.86
COL4A5-208ENST00000505728 TTC39AQ5SRH9 613 aa9.7□□□□□ -0.86
COL4A5-208ENST00000505728 VGLL2Q8N8G2 317 aa9.7□□□□□ -0.86
COL4A5-208ENST00000505728 FLAD1Q8NFF5 587 aa9.7□□□□□ -0.86
COL4A5-208ENST00000505728 DNAJC2Q99543 621 aaKnown RBP9.7□□□□□ -0.86
COL4A5-208ENST00000505728 ANTXR1Q9H6X2 564 aa9.7□□□□□ -0.86
COL4A5-208ENST00000505728 PAG1Q9NWQ8 432 aa9.7□□□□□ -0.86
COL4A5-208ENST00000505728 CD2APQ9Y5K6 639 aa9.7□□□□□ -0.86
COL4A5-208ENST00000505728 SCN7AQ01118 1682 aa9.7□□□□□ -0.86
COL4A5-208ENST00000505728 DDX60Q8IY21 1712 aaKnown RBP9.7□□□□□ -0.86
COL4A5-208ENST00000505728 BRCA1P38398 1863 aaKnown RBP9.7□□□□□ -0.86
COL4A5-208ENST00000505728 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.69□□□□□ -0.86
COL4A5-208ENST00000505728 GRIN3BO60391 1043 aa9.69□□□□□ -0.86
COL4A5-208ENST00000505728 UQCRFS1P1P0C7P4 283 aa9.69□□□□□ -0.86
COL4A5-208ENST00000505728 SLC5A1P13866 664 aa9.69□□□□□ -0.86
COL4A5-208ENST00000505728 FGFR2P21802 821 aa9.69□□□□□ -0.86
COL4A5-208ENST00000505728 ADORA1P30542 326 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms