RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 H3BQV1 296 aa18.94■□□□□ 0.62
DDX41-205ENST00000505081 TIMM10P62072 90 aa18.94■□□□□ 0.62
DDX41-205ENST00000505081 FGD1P98174 961 aa18.94■□□□□ 0.62
DDX41-205ENST00000505081 IFFO2Q5TF58 517 aa18.94■□□□□ 0.62
DDX41-205ENST00000505081 HAUS7Q99871 368 aa18.94■□□□□ 0.62
DDX41-205ENST00000505081 TRPM3Q9HCF6 1732 aaPredicted RBP18.93■□□□□ 0.62
DDX41-205ENST00000505081 SCN11AQ9UI33 1791 aa18.93■□□□□ 0.62
DDX41-205ENST00000505081 GOLIM4O00461 696 aa18.93■□□□□ 0.62
DDX41-205ENST00000505081 KRT32Q14532 448 aa18.93■□□□□ 0.62
DDX41-205ENST00000505081 CLSTN2Q9H4D0 955 aa18.93■□□□□ 0.62
DDX41-205ENST00000505081 DNAJC25Q9H1X3 360 aa18.93■□□□□ 0.62
DDX41-205ENST00000505081 U3KPZ7 1027 aaPredicted RBP18.93■□□□□ 0.62
DDX41-205ENST00000505081 CASP7P55210 303 aa18.92■□□□□ 0.62
DDX41-205ENST00000505081 LRMPQ12912 555 aa18.92■□□□□ 0.62
DDX41-205ENST00000505081 CHST3Q7LGC8 479 aa18.92■□□□□ 0.62
DDX41-205ENST00000505081 CCT2P78371 535 aaKnown RBP18.92■□□□□ 0.62
DDX41-205ENST00000505081 APOBRQ0VD83 1088 aa18.92■□□□□ 0.62
DDX41-205ENST00000505081 ZNF710Q8N1W2 664 aa18.92■□□□□ 0.62
DDX41-205ENST00000505081 FMNL2Q96PY5 1086 aa18.92■□□□□ 0.62
DDX41-205ENST00000505081 AFDNP55196 1824 aaKnown RBP18.92■□□□□ 0.62
DDX41-205ENST00000505081 A0A087WWV3 80 aa18.91■□□□□ 0.62
DDX41-205ENST00000505081 NAP1L2Q9ULW6 460 aaPredicted RBP18.91■□□□□ 0.62
DDX41-205ENST00000505081 CCDC186Q7Z3E2 898 aa18.91■□□□□ 0.62
DDX41-205ENST00000505081 ZNF594Q96JF6 807 aaPredicted RBP18.91■□□□□ 0.62
DDX41-205ENST00000505081 NCOA5Q9HCD5 579 aaKnown RBP18.91■□□□□ 0.62
DDX41-205ENST00000505081 PRIMPOLQ96LW4 560 aa18.9■□□□□ 0.62
DDX41-205ENST00000505081 DDX19AQ9NUU7 478 aaKnown RBP18.9■□□□□ 0.62
DDX41-205ENST00000505081 C1orf167Q5SNV9 1468 aa18.9■□□□□ 0.62
DDX41-205ENST00000505081 CTDNEP1O95476 244 aa18.9■□□□□ 0.62
DDX41-205ENST00000505081 DRC7Q8IY82 874 aa18.9■□□□□ 0.62
DDX41-205ENST00000505081 KBTBD3Q8NAB2 608 aa18.9■□□□□ 0.62
DDX41-205ENST00000505081 MAP7D2Q96T17 732 aa18.9■□□□□ 0.62
DDX41-205ENST00000505081 NBPF26B4DH59 902 aa18.9■□□□□ 0.62
DDX41-205ENST00000505081 CABP4P57796 275 aa18.9■□□□□ 0.62
DDX41-205ENST00000505081 FOXO4P98177 505 aa18.9■□□□□ 0.62
DDX41-205ENST00000505081 GUCY1B3Q02153 619 aa18.9■□□□□ 0.62
DDX41-205ENST00000505081 NBPF14Q5TI25 921 aa18.9■□□□□ 0.62
DDX41-205ENST00000505081 NBPF10Q6P3W6 841 aaKnown RBP18.9■□□□□ 0.62
DDX41-205ENST00000505081 TTLL7Q6ZT98 887 aa18.9■□□□□ 0.62
DDX41-205ENST00000505081 NBPF15Q8N660 670 aa18.9■□□□□ 0.62
DDX41-205ENST00000505081 PDIA4P13667 645 aaKnown RBP18.89■□□□□ 0.61
DDX41-205ENST00000505081 ATG9AQ7Z3C6 839 aa18.89■□□□□ 0.61
DDX41-205ENST00000505081 TRIM5Q9C035 493 aa18.89■□□□□ 0.61
DDX41-205ENST00000505081 RBM43Q6ZSC3 357 aaKnown RBP18.89■□□□□ 0.61
DDX41-205ENST00000505081 DCAF5Q96JK2 942 aa18.89■□□□□ 0.61
DDX41-205ENST00000505081 ZNF165P49910 485 aa18.88■□□□□ 0.61
DDX41-205ENST00000505081 HMGN5P82970 282 aaKnown RBP18.88■□□□□ 0.61
DDX41-205ENST00000505081 LRRC24Q50LG9 513 aa18.88■□□□□ 0.61
DDX41-205ENST00000505081 NSUN7Q8NE18 718 aaKnown RBP18.88■□□□□ 0.61
DDX41-205ENST00000505081 PAG1Q9NWQ8 432 aa18.88■□□□□ 0.61
DDX41-205ENST00000505081 GOLGA6L6A8MZA4 724 aa18.88■□□□□ 0.61
DDX41-205ENST00000505081 ADD1P35611 737 aaKnown RBP18.88■□□□□ 0.61
DDX41-205ENST00000505081 PLBD2Q8NHP8 589 aa18.88■□□□□ 0.61
DDX41-205ENST00000505081 PTPDC1A2A3K4 754 aa18.87■□□□□ 0.61
DDX41-205ENST00000505081 ZNF75DP51815 510 aa18.87■□□□□ 0.61
DDX41-205ENST00000505081 TTLL5Q6EMB2 1281 aa18.87■□□□□ 0.61
DDX41-205ENST00000505081 SMARCC2Q8TAQ2 1214 aa18.87■□□□□ 0.61
DDX41-205ENST00000505081 ARFGEF2Q9Y6D5 1785 aa18.87■□□□□ 0.61
DDX41-205ENST00000505081 PFKFB2O60825 505 aa18.87■□□□□ 0.61
DDX41-205ENST00000505081 DHX32Q7L7V1 743 aaKnown RBP18.87■□□□□ 0.61
DDX41-205ENST00000505081 ERCC4Q92889 916 aaPredicted RBP18.87■□□□□ 0.61
DDX41-205ENST00000505081 GOLPH3LQ9H4A5 285 aa18.87■□□□□ 0.61
DDX41-205ENST00000505081 RIOK3O14730 519 aaKnown RBP18.86■□□□□ 0.61
DDX41-205ENST00000505081 ZBTB3Q9H5J0 574 aa18.86■□□□□ 0.61
DDX41-205ENST00000505081 GPHNQ9NQX3 736 aaPredicted RBP18.86■□□□□ 0.61
DDX41-205ENST00000505081 C11orf57Q6ZUT1 292 aaPredicted RBP18.86■□□□□ 0.61
DDX41-205ENST00000505081 KLHL34Q8N239 644 aa18.86■□□□□ 0.61
DDX41-205ENST00000505081 PUS3Q9BZE2 481 aaKnown RBP18.86■□□□□ 0.61
DDX41-205ENST00000505081 SH3TC1Q8TE82 1336 aa18.85■□□□□ 0.61
DDX41-205ENST00000505081 A1BGP04217 495 aa18.85■□□□□ 0.61
DDX41-205ENST00000505081 PLA2G4DQ86XP0 818 aa18.85■□□□□ 0.61
DDX41-205ENST00000505081 USP28Q96RU2 1077 aa18.85■□□□□ 0.61
DDX41-205ENST00000505081 KIF3AQ9Y496 699 aa18.85■□□□□ 0.61
DDX41-205ENST00000505081 LMTK3Q96Q04 1460 aa18.85■□□□□ 0.61
DDX41-205ENST00000505081 LAMA4Q16363 1823 aa18.85■□□□□ 0.61
DDX41-205ENST00000505081 H7C1W4 665 aa18.85■□□□□ 0.61
DDX41-205ENST00000505081 GTF2F1P35269 517 aaKnown RBP eCLIP18.85■□□□□ 0.61
DDX41-205ENST00000505081 CCAR1Q8IX12 1150 aaKnown RBP18.85■□□□□ 0.61
DDX41-205ENST00000505081 TDRD7Q8NHU6 1098 aaKnown RBP18.85■□□□□ 0.61
DDX41-205ENST00000505081 BCL2L12Q9HB09 334 aa18.85■□□□□ 0.61
DDX41-205ENST00000505081 E7EWF7 191 aa18.84■□□□□ 0.61
DDX41-205ENST00000505081 TPM3P06753 285 aa18.84■□□□□ 0.61
DDX41-205ENST00000505081 HSPD1P10809 573 aaKnown RBP18.84■□□□□ 0.61
DDX41-205ENST00000505081 CCDC144BQ3MJ40 725 aa18.84■□□□□ 0.61
DDX41-205ENST00000505081 CCDC144CPQ8IYA2 1237 aa18.84■□□□□ 0.61
DDX41-205ENST00000505081 FBXW7Q969H0 707 aa18.84■□□□□ 0.61
DDX41-205ENST00000505081 C19orf44Q9H6X5 657 aa18.84■□□□□ 0.61
DDX41-205ENST00000505081 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.84■□□□□ 0.613e-6■■■■□ 26.5
DDX41-205ENST00000505081 ZSCAN16Q9H4T2 348 aaPredicted RBP18.84■□□□□ 0.61
DDX41-205ENST00000505081 CFAP45Q9UL16 551 aa18.84■□□□□ 0.61
DDX41-205ENST00000505081 MAST3O60307 1309 aa18.84■□□□□ 0.61
DDX41-205ENST00000505081 EXOSC10Q01780 885 aaKnown RBP18.84■□□□□ 0.61
DDX41-205ENST00000505081 ZNF142P52746 1687 aaPredicted RBP18.83■□□□□ 0.61
DDX41-205ENST00000505081 RFX7Q2KHR2 1363 aa18.83■□□□□ 0.61
DDX41-205ENST00000505081 M0R2C6 588 aa18.83■□□□□ 0.61
DDX41-205ENST00000505081 ZMYM1Q5SVZ6 1142 aa18.83■□□□□ 0.61
DDX41-205ENST00000505081 CCDC85AQ96PX6 553 aaPredicted RBP18.83■□□□□ 0.61
DDX41-205ENST00000505081 HSP90AB3PQ58FF7 597 aa18.83■□□□□ 0.6
DDX41-205ENST00000505081 OTUD7BQ6GQQ9 843 aa18.83■□□□□ 0.6
DDX41-205ENST00000505081 ZSCAN25Q6NSZ9 544 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms