RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 PURBQ96QR8 312 aaKnown RBP8.67□□□□□ -1.02
CDH9-202ENST00000505020 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.67□□□□□ -1.02
CDH9-202ENST00000505020 RIC8AQ9NPQ8 531 aa8.67□□□□□ -1.02
CDH9-202ENST00000505020 IP6K2Q9UHH9 426 aa8.67□□□□□ -1.02
CDH9-202ENST00000505020 GGT7Q9UJ14 662 aa8.67□□□□□ -1.02
CDH9-202ENST00000505020 TMCC3Q9ULS5 477 aa8.67□□□□□ -1.02
CDH9-202ENST00000505020 WASHC2CQ9Y4E1 1318 aa8.67□□□□□ -1.02
CDH9-202ENST00000505020 SFI1A8K8P3 1242 aa8.66□□□□□ -1.02
CDH9-202ENST00000505020 ZBBXA8MT70 800 aa8.66□□□□□ -1.02
CDH9-202ENST00000505020 PER1O15534 1290 aaPredicted RBP8.66□□□□□ -1.02
CDH9-202ENST00000505020 ZBTB24O43167 697 aaPredicted RBP8.66□□□□□ -1.02
CDH9-202ENST00000505020 PPFIA3O75145 1194 aa8.66□□□□□ -1.02
CDH9-202ENST00000505020 TSPAN7P41732 249 aa8.66□□□□□ -1.02
CDH9-202ENST00000505020 SARSP49591 514 aaKnown RBP8.66□□□□□ -1.02
CDH9-202ENST00000505020 ST13P50502 369 aaKnown RBP8.66□□□□□ -1.02
CDH9-202ENST00000505020 RAB33AQ14088 237 aa8.66□□□□□ -1.02
CDH9-202ENST00000505020 C16orf54Q6UWD8 224 aa8.66□□□□□ -1.02
CDH9-202ENST00000505020 ILDR1Q86SU0 546 aaPredicted RBP8.66□□□□□ -1.02
CDH9-202ENST00000505020 SLAIN1Q8ND83 568 aa8.66□□□□□ -1.02
CDH9-202ENST00000505020 TMEM87BQ96K49 555 aa8.66□□□□□ -1.02
CDH9-202ENST00000505020 FMNL2Q96PY5 1086 aa8.66□□□□□ -1.02
CDH9-202ENST00000505020 DNAJC7Q99615 494 aa8.66□□□□□ -1.02
CDH9-202ENST00000505020 PCDHGA10Q9Y5H3 936 aa8.66□□□□□ -1.02
CDH9-202ENST00000505020 MRVI1Q9Y6F6 885 aa8.66□□□□□ -1.02
CDH9-202ENST00000505020 GOLGA6L6A8MZA4 724 aa8.66□□□□□ -1.02
CDH9-202ENST00000505020 ALG1L2C9J202 215 aa8.66□□□□□ -1.02
CDH9-202ENST00000505020 ZBTB7BO15156 539 aaPredicted RBP8.66□□□□□ -1.02
CDH9-202ENST00000505020 KLF4O43474 513 aa8.66□□□□□ -1.02
CDH9-202ENST00000505020 RRP9O43818 475 aaKnown RBP8.66□□□□□ -1.02
CDH9-202ENST00000505020 FAM13AO94988 1023 aa8.66□□□□□ -1.02
CDH9-202ENST00000505020 VARSP26640 1264 aaKnown RBP8.66□□□□□ -1.02
CDH9-202ENST00000505020 ETFBP38117 255 aa8.66□□□□□ -1.02
CDH9-202ENST00000505020 EML3Q32P44 896 aa8.66□□□□□ -1.02
CDH9-202ENST00000505020 FAM133BQ5BKY9 247 aaKnown RBP8.66□□□□□ -1.02
CDH9-202ENST00000505020 ZC3H12AQ5D1E8 599 aaKnown RBP8.66□□□□□ -1.02
CDH9-202ENST00000505020 NYAP1Q6ZVC0 841 aa8.66□□□□□ -1.02
CDH9-202ENST00000505020 HS2ST1Q7LGA3 356 aa8.66□□□□□ -1.02
CDH9-202ENST00000505020 ANKRD13BQ86YJ7 626 aa8.66□□□□□ -1.02
CDH9-202ENST00000505020 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.66□□□□□ -1.02
CDH9-202ENST00000505020 GAS2L2Q8NHY3 880 aa8.66□□□□□ -1.02
CDH9-202ENST00000505020 CRELD1Q96HD1 420 aa8.66□□□□□ -1.02
CDH9-202ENST00000505020 PAWRQ96IZ0 340 aaKnown RBP8.66□□□□□ -1.02
CDH9-202ENST00000505020 PDGFDQ9GZP0 370 aaPredicted RBP8.66□□□□□ -1.02
CDH9-202ENST00000505020 PIP5K1CO60331 668 aa8.65□□□□□ -1.02
CDH9-202ENST00000505020 VAMP4O75379 141 aa8.65□□□□□ -1.02
CDH9-202ENST00000505020 F2P00734 622 aa8.65□□□□□ -1.02
CDH9-202ENST00000505020 CD44P16070 742 aaKnown RBP8.65□□□□□ -1.02
CDH9-202ENST00000505020 HALP42357 657 aa8.65□□□□□ -1.02
CDH9-202ENST00000505020 PTPN12Q05209 780 aaKnown RBP8.65□□□□□ -1.02
CDH9-202ENST00000505020 FKBP5Q13451 457 aaPredicted RBP8.65□□□□□ -1.02
CDH9-202ENST00000505020 SQSTM1Q13501 440 aa8.65□□□□□ -1.02
CDH9-202ENST00000505020 LCE2DQ5TA82 110 aaPredicted RBP8.65□□□□□ -1.02
CDH9-202ENST00000505020 IL31Q6EBC2 164 aa8.65□□□□□ -1.02
CDH9-202ENST00000505020 LCA5Q86VQ0 697 aa8.65□□□□□ -1.02
CDH9-202ENST00000505020 TTC30AQ86WT1 665 aa8.65□□□□□ -1.02
CDH9-202ENST00000505020 FBXO41Q8TF61 875 aa8.65□□□□□ -1.02
CDH9-202ENST00000505020 SYMPKQ92797 1274 aaKnown RBP8.65□□□□□ -1.02
CDH9-202ENST00000505020 PGBD4Q96DM1 585 aa8.65□□□□□ -1.02
CDH9-202ENST00000505020 TRMT2BQ96GJ1 504 aaKnown RBP8.65□□□□□ -1.02
CDH9-202ENST00000505020 TRIM64CA6NLI5 447 aa8.64□□□□□ -1.03
CDH9-202ENST00000505020 RASGRP1O95267 797 aa8.64□□□□□ -1.03
CDH9-202ENST00000505020 MPSTP25325 297 aa8.64□□□□□ -1.03
CDH9-202ENST00000505020 PUM3Q15397 648 aaKnown RBP8.64□□□□□ -1.03
CDH9-202ENST00000505020 PPP4R3AQ6IN85 833 aa8.64□□□□□ -1.03
CDH9-202ENST00000505020 CFAP161Q6P656 301 aa8.64□□□□□ -1.03
CDH9-202ENST00000505020 TPCN2Q8NHX9 752 aa8.64□□□□□ -1.03
CDH9-202ENST00000505020 CCDC34Q96HJ3 373 aa8.64□□□□□ -1.03
CDH9-202ENST00000505020 GPR182O15218 404 aa8.64□□□□□ -1.03
CDH9-202ENST00000505020 AKAP10O43572 662 aa8.64□□□□□ -1.03
CDH9-202ENST00000505020 IGHA2P01877 340 aa8.64□□□□□ -1.03
CDH9-202ENST00000505020 KCNA2P16389 499 aa8.64□□□□□ -1.03
CDH9-202ENST00000505020 GNA15P30679 374 aa8.64□□□□□ -1.03
CDH9-202ENST00000505020 PIK3CAP42336 1068 aa8.64□□□□□ -1.03
CDH9-202ENST00000505020 TNNT2P45379 298 aaPredicted RBP8.64□□□□□ -1.03
CDH9-202ENST00000505020 ATP1A2P50993 1020 aa8.64□□□□□ -1.03
CDH9-202ENST00000505020 NEK3P51956 506 aa8.64□□□□□ -1.03
CDH9-202ENST00000505020 PRSS12P56730 875 aa8.64□□□□□ -1.03
CDH9-202ENST00000505020 NUCB1Q02818 461 aa8.64□□□□□ -1.03
CDH9-202ENST00000505020 ZKSCAN8Q15776 578 aaPredicted RBP8.64□□□□□ -1.03
CDH9-202ENST00000505020 PDXDC2PQ6P474 469 aa8.64□□□□□ -1.03
CDH9-202ENST00000505020 LRP10Q7Z4F1 713 aa8.64□□□□□ -1.03
CDH9-202ENST00000505020 RASSF3Q86WH2 238 aa8.64□□□□□ -1.03
CDH9-202ENST00000505020 SIX5Q8N196 739 aa8.64□□□□□ -1.03
CDH9-202ENST00000505020 CLASRPQ8N2M8 674 aaKnown RBP8.64□□□□□ -1.03
CDH9-202ENST00000505020 NELL1Q92832 810 aa8.64□□□□□ -1.03
CDH9-202ENST00000505020 HINFPQ9BQA5 517 aa8.64□□□□□ -1.03
CDH9-202ENST00000505020 C2orf49Q9BVC5 232 aaPredicted RBP8.64□□□□□ -1.03
CDH9-202ENST00000505020 CCDC87Q9NVE4 849 aa8.64□□□□□ -1.03
CDH9-202ENST00000505020 ZNF652Q9Y2D9 606 aa8.64□□□□□ -1.03
CDH9-202ENST00000505020 TRIM6-TRIM34B2RNG4 842 aa8.63□□□□□ -1.03
CDH9-202ENST00000505020 POTEB2H3BUK9 544 aa8.63□□□□□ -1.03
CDH9-202ENST00000505020 NPR3P17342 541 aa8.63□□□□□ -1.03
CDH9-202ENST00000505020 PMLP29590 882 aa8.63□□□□□ -1.03
CDH9-202ENST00000505020 ALKBH2Q6NS38 261 aa8.63□□□□□ -1.03
CDH9-202ENST00000505020 MMS22LQ6ZRQ5 1243 aa8.63□□□□□ -1.03
CDH9-202ENST00000505020 TRIM50Q86XT4 487 aa8.63□□□□□ -1.03
CDH9-202ENST00000505020 CDAN1Q8IWY9 1227 aa8.63□□□□□ -1.03
CDH9-202ENST00000505020 HNRNPLLQ8WVV9 542 aaKnown RBP8.63□□□□□ -1.03
CDH9-202ENST00000505020 TMEM63CQ9P1W3 806 aa8.63□□□□□ -1.03
CDH9-202ENST00000505020 LEMD3Q9Y2U8 911 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms