RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 BCL2L13Q9BXK5 485 aa16.43■□□□□ 0.22
RNF4-206ENST00000504782 CACNA1FO60840 1977 aa16.43■□□□□ 0.22
RNF4-206ENST00000504782 CDHR2Q9BYE9 1310 aa16.43■□□□□ 0.22
RNF4-206ENST00000504782 POLR2AP24928 1970 aaKnown RBP16.42■□□□□ 0.22
RNF4-206ENST00000504782 ECE2O60344 883 aa16.42■□□□□ 0.22
RNF4-206ENST00000504782 TNIP1Q15025 636 aa16.42■□□□□ 0.22
RNF4-206ENST00000504782 DLK2Q6UY11 383 aa16.42■□□□□ 0.22
RNF4-206ENST00000504782 WDR63Q8IWG1 891 aa16.42■□□□□ 0.22
RNF4-206ENST00000504782 CNOT7Q9UIV1 285 aaKnown RBP16.42■□□□□ 0.22
RNF4-206ENST00000504782 EGFRP00533 1210 aa16.41■□□□□ 0.22
RNF4-206ENST00000504782 CTSWP56202 376 aa16.41■□□□□ 0.22
RNF4-206ENST00000504782 FLIIQ13045 1269 aa16.41■□□□□ 0.22
RNF4-206ENST00000504782 MICALL2Q8IY33 904 aa16.41■□□□□ 0.22
RNF4-206ENST00000504782 TTLL11Q8NHH1 800 aa16.41■□□□□ 0.22
RNF4-206ENST00000504782 CHMP4AQ9BY43 222 aa16.41■□□□□ 0.22
RNF4-206ENST00000504782 GLIS2Q9BZE0 524 aaPredicted RBP16.41■□□□□ 0.22
RNF4-206ENST00000504782 GREM2Q9H772 168 aa16.41■□□□□ 0.22
RNF4-206ENST00000504782 PODXL2Q9NZ53 605 aa16.41■□□□□ 0.22
RNF4-206ENST00000504782 ANKIB1Q9P2G1 1089 aa16.41■□□□□ 0.22
RNF4-206ENST00000504782 RASSF10A6NK89 507 aa16.4■□□□□ 0.22
RNF4-206ENST00000504782 H7C1W4 665 aa16.4■□□□□ 0.22
RNF4-206ENST00000504782 UFL1O94874 794 aa16.4■□□□□ 0.22
RNF4-206ENST00000504782 DEFB115Q30KQ5 88 aa16.4■□□□□ 0.22
RNF4-206ENST00000504782 SAMD7Q7Z3H4 446 aa16.4■□□□□ 0.22
RNF4-206ENST00000504782 UBE3BQ7Z3V4 1068 aa16.4■□□□□ 0.22
RNF4-206ENST00000504782 PGAP2Q9UHJ9 254 aa16.4■□□□□ 0.22
RNF4-206ENST00000504782 ABT1Q9ULW3 272 aaKnown RBP16.4■□□□□ 0.22
RNF4-206ENST00000504782 PSME4Q14997 1843 aa16.4■□□□□ 0.22
RNF4-206ENST00000504782 HSP90B1P14625 803 aaKnown RBP16.39■□□□□ 0.21
RNF4-206ENST00000504782 CASP7P55210 303 aa16.39■□□□□ 0.21
RNF4-206ENST00000504782 NEXNQ0ZGT2 675 aa16.39■□□□□ 0.21
RNF4-206ENST00000504782 ANKRD18AQ8IVF6 992 aa16.39■□□□□ 0.21
RNF4-206ENST00000504782 EYA3Q99504 573 aa16.39■□□□□ 0.21
RNF4-206ENST00000504782 GGA1Q9UJY5 639 aa16.39■□□□□ 0.21
RNF4-206ENST00000504782 ZNF646O15015 1829 aaPredicted RBP16.38■□□□□ 0.21
RNF4-206ENST00000504782 F6X3S4 739 aa16.38■□□□□ 0.21
RNF4-206ENST00000504782 FOXN1O15353 648 aa16.38■□□□□ 0.21
RNF4-206ENST00000504782 FKBP5Q13451 457 aaPredicted RBP16.38■□□□□ 0.21
RNF4-206ENST00000504782 GCKRQ14397 625 aa16.38■□□□□ 0.21
RNF4-206ENST00000504782 ZC3H12CQ9C0D7 883 aaKnown RBP16.38■□□□□ 0.21
RNF4-206ENST00000504782 H7C1D1 291 aa16.37■□□□□ 0.21
RNF4-206ENST00000504782 TBC1D10BQ4KMP7 808 aaPredicted RBP16.37■□□□□ 0.21
RNF4-206ENST00000504782 RBM26Q5T8P6 1007 aaKnown RBP16.37■□□□□ 0.21
RNF4-206ENST00000504782 DNAAF4Q8WXU2 420 aa16.37■□□□□ 0.21
RNF4-206ENST00000504782 DPF2Q92785 391 aa16.37■□□□□ 0.21
RNF4-206ENST00000504782 MINPP1Q9UNW1 487 aa16.37■□□□□ 0.21
RNF4-206ENST00000504782 WDR33Q9C0J8 1336 aaKnown RBP16.37■□□□□ 0.21
RNF4-206ENST00000504782 CYP4F22Q6NT55 531 aa16.36■□□□□ 0.21
RNF4-206ENST00000504782 XDHP47989 1333 aa16.36■□□□□ 0.21
RNF4-206ENST00000504782 CELF2O95319 508 aaKnown RBP16.35■□□□□ 0.21
RNF4-206ENST00000504782 VIL1P09327 827 aaKnown RBP16.35■□□□□ 0.21
RNF4-206ENST00000504782 GRM1Q13255 1194 aa16.35■□□□□ 0.21
RNF4-206ENST00000504782 USP48Q86UV5 1035 aa16.35■□□□□ 0.21
RNF4-206ENST00000504782 BSDC1Q9NW68 430 aaPredicted RBP16.35■□□□□ 0.21
RNF4-206ENST00000504782 TLL2Q9Y6L7 1015 aa16.35■□□□□ 0.21
RNF4-206ENST00000504782 ASTN2O75129 1339 aaPredicted RBP16.35■□□□□ 0.21
RNF4-206ENST00000504782 THSD7BQ9C0I4 1608 aa16.34■□□□□ 0.21
RNF4-206ENST00000504782 A0A1B0GUL6 1792 aa16.34■□□□□ 0.21
RNF4-206ENST00000504782 ATP2B4P23634 1241 aa16.34■□□□□ 0.21
RNF4-206ENST00000504782 FAM161AQ3B820 660 aa16.34■□□□□ 0.21
RNF4-206ENST00000504782 TXNRD3Q86VQ6 643 aa16.34■□□□□ 0.21
RNF4-206ENST00000504782 TNS4Q8IZW8 715 aa16.34■□□□□ 0.21
RNF4-206ENST00000504782 LINS1Q8NG48 757 aa16.34■□□□□ 0.21
RNF4-206ENST00000504782 ZC3H15Q8WU90 426 aaKnown RBP16.34■□□□□ 0.21
RNF4-206ENST00000504782 CDC5LQ99459 802 aaKnown RBP16.34■□□□□ 0.21
RNF4-206ENST00000504782 PLA2G12BQ9BX93 195 aa16.34■□□□□ 0.21
RNF4-206ENST00000504782 ZNF408Q9H9D4 720 aa16.34■□□□□ 0.21
RNF4-206ENST00000504782 WBP1LQ9NX94 342 aa16.34■□□□□ 0.21
RNF4-206ENST00000504782 G3V3G9 751 aa16.33■□□□□ 0.2
RNF4-206ENST00000504782 CSF1RP07333 972 aa16.33■□□□□ 0.2
RNF4-206ENST00000504782 ITGA6P23229 1130 aa16.33■□□□□ 0.2
RNF4-206ENST00000504782 KLRK1P26718 216 aa16.33■□□□□ 0.2
RNF4-206ENST00000504782 BEND3Q5T5X7 828 aa16.33■□□□□ 0.2
RNF4-206ENST00000504782 DCAF8Q5TAQ9 597 aa16.33■□□□□ 0.2
RNF4-206ENST00000504782 PAXIP1Q6ZW49 1069 aaPredicted RBP16.33■□□□□ 0.2
RNF4-206ENST00000504782 CAPNS2Q96L46 248 aa16.33■□□□□ 0.2
RNF4-206ENST00000504782 MXD3Q9BW11 206 aa16.33■□□□□ 0.2
RNF4-206ENST00000504782 ZNF521Q96K83 1311 aa16.33■□□□□ 0.2
RNF4-206ENST00000504782 ADM5C9JUS6 153 aa16.32■□□□□ 0.2
RNF4-206ENST00000504782 AOC2O75106 756 aa16.32■□□□□ 0.2
RNF4-206ENST00000504782 CAPN15O75808 1086 aa16.32■□□□□ 0.2
RNF4-206ENST00000504782 RPS12P25398 132 aaKnown RBP16.32■□□□□ 0.2
RNF4-206ENST00000504782 CCT4P50991 539 aaKnown RBP16.32■□□□□ 0.2
RNF4-206ENST00000504782 FOXO4P98177 505 aa16.32■□□□□ 0.2
RNF4-206ENST00000504782 CDC37L1Q7L3B6 337 aa16.32■□□□□ 0.2
RNF4-206ENST00000504782 SAPCD2Q86UD0 394 aa16.32■□□□□ 0.2
RNF4-206ENST00000504782 KIF4BQ2VIQ3 1234 aa16.31■□□□□ 0.2
RNF4-206ENST00000504782 EPHA10Q5JZY3 1008 aa16.31■□□□□ 0.2
RNF4-206ENST00000504782 RSBN1LQ6PCB5 846 aaPredicted RBP16.31■□□□□ 0.2
RNF4-206ENST00000504782 GMLQ99445 158 aa16.31■□□□□ 0.2
RNF4-206ENST00000504782 MYH16Q9H6N6 1097 aa16.31■□□□□ 0.2
RNF4-206ENST00000504782 MED23Q9ULK4 1368 aa16.3■□□□□ 0.2
RNF4-206ENST00000504782 SNAP23O00161 211 aa16.3■□□□□ 0.2
RNF4-206ENST00000504782 IGHMBP2P38935 993 aaKnown RBP16.29■□□□□ 0.2
RNF4-206ENST00000504782 LBX1P52954 281 aa16.29■□□□□ 0.2
RNF4-206ENST00000504782 KRT26Q7Z3Y9 468 aa16.29■□□□□ 0.2
RNF4-206ENST00000504782 AIDAQ96BJ3 306 aa16.29■□□□□ 0.2
RNF4-206ENST00000504782 SCAF8Q9UPN6 1271 aaKnown RBP16.29■□□□□ 0.2
RNF4-206ENST00000504782 USP17L3A6NCW0 530 aa16.28■□□□□ 0.2
RNF4-206ENST00000504782 USP17L4A6NCW7 530 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms