RNA–Protein interactions for RNA: ENST00000504676.5

CSNK1A1-204, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK1A1, Length 1,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-204ENST00000504676 MAP3K9P80192 1104 aa8.58□□□□□ -1.04
CSNK1A1-204ENST00000504676 MLECQ14165 292 aa8.58□□□□□ -1.04
CSNK1A1-204ENST00000504676 DCTN1Q14203 1278 aa8.58□□□□□ -1.04
CSNK1A1-204ENST00000504676 CDHR5Q9HBB8 845 aa8.58□□□□□ -1.04
CSNK1A1-204ENST00000504676 MRPL42Q9Y6G3 142 aaKnown RBP8.58□□□□□ -1.04
CSNK1A1-204ENST00000504676 CYP2E1P05181 493 aaPredicted RBP8.58□□□□□ -1.04
CSNK1A1-204ENST00000504676 SDSP20132 328 aa8.58□□□□□ -1.04
CSNK1A1-204ENST00000504676 HSD3B2P26439 372 aa8.58□□□□□ -1.04
CSNK1A1-204ENST00000504676 OS9Q13438 667 aaPredicted RBP8.58□□□□□ -1.04
CSNK1A1-204ENST00000504676 CCDC30Q5VVM6 783 aa8.58□□□□□ -1.04
CSNK1A1-204ENST00000504676 STK31Q9BXU1 1019 aa8.58□□□□□ -1.04
CSNK1A1-204ENST00000504676 MAP3K19Q56UN5 1328 aa8.57□□□□□ -1.04
CSNK1A1-204ENST00000504676 PPP1R3GB7ZBB8 358 aa8.57□□□□□ -1.04
CSNK1A1-204ENST00000504676 LZTS3O60299 673 aaPredicted RBP8.57□□□□□ -1.04
CSNK1A1-204ENST00000504676 MAPK1P28482 360 aa8.57□□□□□ -1.04
CSNK1A1-204ENST00000504676 ATP8B2P98198 1209 aa8.57□□□□□ -1.04
CSNK1A1-204ENST00000504676 PPP1R18Q6NYC8 613 aa8.57□□□□□ -1.04
CSNK1A1-204ENST00000504676 RSBN1LQ6PCB5 846 aaPredicted RBP8.57□□□□□ -1.04
CSNK1A1-204ENST00000504676 KRBA2Q6ZNG9 492 aa8.57□□□□□ -1.04
CSNK1A1-204ENST00000504676 MCM10Q7L590 875 aa8.57□□□□□ -1.04
CSNK1A1-204ENST00000504676 FILIP1Q7Z7B0 1213 aa8.57□□□□□ -1.04
CSNK1A1-204ENST00000504676 METTL3Q86U44 580 aaKnown RBP8.57□□□□□ -1.04
CSNK1A1-204ENST00000504676 TMC2Q8TDI7 906 aa8.57□□□□□ -1.04
CSNK1A1-204ENST00000504676 CLP1Q92989 425 aaKnown RBP8.57□□□□□ -1.04
CSNK1A1-204ENST00000504676 GMLQ99445 158 aa8.57□□□□□ -1.04
CSNK1A1-204ENST00000504676 MTA3Q9BTC8 594 aa8.57□□□□□ -1.04
CSNK1A1-204ENST00000504676 STAP2Q9UGK3 403 aa8.57□□□□□ -1.04
CSNK1A1-204ENST00000504676 TSPYL4Q9UJ04 414 aa8.57□□□□□ -1.04
CSNK1A1-204ENST00000504676 PXDNLA1KZ92 1463 aa8.57□□□□□ -1.04
CSNK1A1-204ENST00000504676 TSPOAP1O95153 1857 aa8.57□□□□□ -1.04
CSNK1A1-204ENST00000504676 USP54Q70EL1 1684 aa8.56□□□□□ -1.04
CSNK1A1-204ENST00000504676 RIMS1Q86UR5 1692 aaKnown RBP8.56□□□□□ -1.04
CSNK1A1-204ENST00000504676 BAG4O95429 457 aaKnown RBP8.56□□□□□ -1.04
CSNK1A1-204ENST00000504676 LTKP29376 864 aa8.56□□□□□ -1.04
CSNK1A1-204ENST00000504676 DNAJA1P31689 397 aaKnown RBP8.56□□□□□ -1.04
CSNK1A1-204ENST00000504676 TNNI2P48788 182 aa8.56□□□□□ -1.04
CSNK1A1-204ENST00000504676 MTHFSDQ2M296 383 aaKnown RBP8.56□□□□□ -1.04
CSNK1A1-204ENST00000504676 CCAR1Q8IX12 1150 aaKnown RBP8.56□□□□□ -1.04
CSNK1A1-204ENST00000504676 THEMISQ8N1K5 641 aaPredicted RBP8.56□□□□□ -1.04
CSNK1A1-204ENST00000504676 TGIF2Q9GZN2 237 aa8.56□□□□□ -1.04
CSNK1A1-204ENST00000504676 MSH6P52701 1360 aa8.56□□□□□ -1.04
CSNK1A1-204ENST00000504676 PEAK1Q9H792 1746 aa8.56□□□□□ -1.04
CSNK1A1-204ENST00000504676 GNAT3A8MTJ3 354 aa8.56□□□□□ -1.04
CSNK1A1-204ENST00000504676 HOXB7P09629 217 aa8.56□□□□□ -1.04
CSNK1A1-204ENST00000504676 ATP2B4P23634 1241 aa8.56□□□□□ -1.04
CSNK1A1-204ENST00000504676 SOX11P35716 441 aa8.56□□□□□ -1.04
CSNK1A1-204ENST00000504676 PDE1AP54750 535 aa8.56□□□□□ -1.04
CSNK1A1-204ENST00000504676 ZNF445P59923 1031 aa8.56□□□□□ -1.04
CSNK1A1-204ENST00000504676 FOXK1P85037 733 aa8.56□□□□□ -1.04
CSNK1A1-204ENST00000504676 EAPPQ56P03 285 aaPredicted RBP8.56□□□□□ -1.04
CSNK1A1-204ENST00000504676 C11orf96Q7Z7L8 435 aa8.56□□□□□ -1.04
CSNK1A1-204ENST00000504676 MEIS3Q99687 375 aa8.56□□□□□ -1.04
CSNK1A1-204ENST00000504676 OSBPL2Q9H1P3 480 aa8.56□□□□□ -1.04
CSNK1A1-204ENST00000504676 ACBD3Q9H3P7 528 aa8.56□□□□□ -1.04
CSNK1A1-204ENST00000504676 SALL3Q9BXA9 1300 aa8.55□□□□□ -1.04
CSNK1A1-204ENST00000504676 CD2BP2O95400 341 aaKnown RBP8.55□□□□□ -1.04
CSNK1A1-204ENST00000504676 AMPHP49418 695 aa8.55□□□□□ -1.04
CSNK1A1-204ENST00000504676 HS1BP3Q53T59 392 aa8.55□□□□□ -1.04
CSNK1A1-204ENST00000504676 TMEM92Q6UXU6 159 aa8.55□□□□□ -1.04
CSNK1A1-204ENST00000504676 FMNL3Q8IVF7 1028 aa8.55□□□□□ -1.04
CSNK1A1-204ENST00000504676 INTS4Q96HW7 963 aaKnown RBP8.55□□□□□ -1.04
CSNK1A1-204ENST00000504676 EYA1Q99502 592 aa8.55□□□□□ -1.04
CSNK1A1-204ENST00000504676 LRRCC1Q9C099 1032 aa8.55□□□□□ -1.04
CSNK1A1-204ENST00000504676 CCSER2Q9H7U1 834 aa8.55□□□□□ -1.04
CSNK1A1-204ENST00000504676 GNL3LQ9NVN8 582 aaKnown RBP8.55□□□□□ -1.04
CSNK1A1-204ENST00000504676 DDX56Q9NY93 547 aaKnown RBP8.55□□□□□ -1.04
CSNK1A1-204ENST00000504676 CACNA1FO60840 1977 aa8.55□□□□□ -1.04
CSNK1A1-204ENST00000504676 CCDC173Q0VFZ6 552 aa8.54□□□□□ -1.04
CSNK1A1-204ENST00000504676 SEMA3FQ13275 785 aa8.54□□□□□ -1.04
CSNK1A1-204ENST00000504676 BIRC2Q13490 618 aa8.54□□□□□ -1.04
CSNK1A1-204ENST00000504676 TAF7Q15545 349 aaPredicted RBP8.54□□□□□ -1.04
CSNK1A1-204ENST00000504676 C16orf71Q8IYS4 520 aaPredicted RBP8.54□□□□□ -1.04
CSNK1A1-204ENST00000504676 TMEM87AQ8NBN3 555 aa8.54□□□□□ -1.04
CSNK1A1-204ENST00000504676 NGDNQ8NEJ9 315 aaKnown RBP8.54□□□□□ -1.04
CSNK1A1-204ENST00000504676 ANP32BQ92688 251 aaKnown RBP8.54□□□□□ -1.04
CSNK1A1-204ENST00000504676 RPS6KC1Q96S38 1066 aa8.54□□□□□ -1.04
CSNK1A1-204ENST00000504676 PPP1R9BQ96SB3 815 aa8.54□□□□□ -1.04
CSNK1A1-204ENST00000504676 HDAC5Q9UQL6 1122 aa8.54□□□□□ -1.04
CSNK1A1-204ENST00000504676 LRRC37A3O60309 1634 aa8.54□□□□□ -1.04
CSNK1A1-204ENST00000504676 H3BRB1 525 aa8.53□□□□□ -1.04
CSNK1A1-204ENST00000504676 S100BP04271 92 aaPredicted RBP8.53□□□□□ -1.04
CSNK1A1-204ENST00000504676 COL19A1Q14993 1142 aa8.53□□□□□ -1.04
CSNK1A1-204ENST00000504676 CRTC2Q53ET0 693 aaPredicted RBP8.53□□□□□ -1.04
CSNK1A1-204ENST00000504676 TUT1Q9H6E5 874 aaKnown RBP8.53□□□□□ -1.04
CSNK1A1-204ENST00000504676 FMN2Q9NZ56 1722 aa8.53□□□□□ -1.04
CSNK1A1-204ENST00000504676 FANCCQ00597 558 aa8.53□□□□□ -1.04
CSNK1A1-204ENST00000504676 CUL4AQ13619 759 aa8.53□□□□□ -1.04
CSNK1A1-204ENST00000504676 RRAGDQ9NQL2 400 aaPredicted RBP8.53□□□□□ -1.04
CSNK1A1-204ENST00000504676 DDX49Q9Y6V7 483 aaKnown RBP8.53□□□□□ -1.04
CSNK1A1-204ENST00000504676 ADGRL3Q9HAR2 1447 aa8.52□□□□□ -1.05
CSNK1A1-204ENST00000504676 KIF13AQ9H1H9 1805 aa8.52□□□□□ -1.05
CSNK1A1-204ENST00000504676 MX1P20591 662 aa8.52□□□□□ -1.05
CSNK1A1-204ENST00000504676 ZNF211Q13398 564 aaPredicted RBP8.52□□□□□ -1.05
CSNK1A1-204ENST00000504676 KRT24Q2M2I5 525 aa8.52□□□□□ -1.05
CSNK1A1-204ENST00000504676 TRIM44Q96DX7 344 aaPredicted RBP8.52□□□□□ -1.05
CSNK1A1-204ENST00000504676 ESYT1Q9BSJ8 1104 aa8.52□□□□□ -1.05
CSNK1A1-204ENST00000504676 MAP3K5Q99683 1374 aa8.52□□□□□ -1.05
CSNK1A1-204ENST00000504676 N4BP2Q86UW6 1770 aaPredicted RBP8.51□□□□□ -1.05
CSNK1A1-204ENST00000504676 MOXD2PA6NHM9 499 aa8.51□□□□□ -1.05
CSNK1A1-204ENST00000504676 ESPNB1AK53 854 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms