RNA–Protein interactions for RNA: ENST00000504441.6

PAAF1-204, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 5

Gene PAAF1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-204ENST00000504441 DDX60Q8IY21 1712 aaKnown RBP18.4■□□□□ 0.54
PAAF1-204ENST00000504441 COL4A1P02462 1669 aa18.39■□□□□ 0.53
PAAF1-204ENST00000504441 RPS12P25398 132 aaKnown RBP18.39■□□□□ 0.53
PAAF1-204ENST00000504441 SF3B3Q15393 1217 aaKnown RBP18.39■□□□□ 0.53
PAAF1-204ENST00000504441 SULF1Q8IWU6 871 aa18.39■□□□□ 0.53
PAAF1-204ENST00000504441 RNF186Q9NXI6 227 aa18.39■□□□□ 0.53
PAAF1-204ENST00000504441 GGA3Q9NZ52 723 aa18.39■□□□□ 0.53
PAAF1-204ENST00000504441 ASTN2O75129 1339 aaPredicted RBP18.39■□□□□ 0.53
PAAF1-204ENST00000504441 TBC1D16Q8TBP0 767 aa18.38■□□□□ 0.53
PAAF1-204ENST00000504441 CHL1O00533 1208 aa18.37■□□□□ 0.53
PAAF1-204ENST00000504441 IRS4O14654 1257 aaPredicted RBP18.37■□□□□ 0.53
PAAF1-204ENST00000504441 RPS8P62241 208 aaKnown RBP18.37■□□□□ 0.53
PAAF1-204ENST00000504441 ISCA1Q9BUE6 129 aa18.37■□□□□ 0.53
PAAF1-204ENST00000504441 ZC3H12CQ9C0D7 883 aaKnown RBP18.37■□□□□ 0.53
PAAF1-204ENST00000504441 SAGE1Q9NXZ1 904 aa18.37■□□□□ 0.53
PAAF1-204ENST00000504441 UFL1O94874 794 aa18.36■□□□□ 0.53
PAAF1-204ENST00000504441 POLR2AP24928 1970 aaKnown RBP18.36■□□□□ 0.53
PAAF1-204ENST00000504441 ANKIB1Q9P2G1 1089 aa18.36■□□□□ 0.53
PAAF1-204ENST00000504441 DBF4Q9UBU7 674 aaPredicted RBP18.36■□□□□ 0.53
PAAF1-204ENST00000504441 SLC10A3P09131 477 aa18.35■□□□□ 0.53
PAAF1-204ENST00000504441 CDCA5Q96FF9 252 aa18.35■□□□□ 0.53
PAAF1-204ENST00000504441 VIL1P09327 827 aaKnown RBP18.34■□□□□ 0.53
PAAF1-204ENST00000504441 ANGEL2Q5VTE6 544 aaKnown RBP18.34■□□□□ 0.53
PAAF1-204ENST00000504441 CSRNP1Q96S65 589 aa18.34■□□□□ 0.53
PAAF1-204ENST00000504441 SEC31BQ9NQW1 1179 aa18.34■□□□□ 0.53
PAAF1-204ENST00000504441 SCARF1Q14162 830 aa18.33■□□□□ 0.52
PAAF1-204ENST00000504441 CCDC85AQ96PX6 553 aaPredicted RBP18.33■□□□□ 0.52
PAAF1-204ENST00000504441 HYPKQ9NX55 129 aa18.33■□□□□ 0.52
PAAF1-204ENST00000504441 RIC3Q7Z5B4 369 aa18.32■□□□□ 0.52
PAAF1-204ENST00000504441 GGA1Q9UJY5 639 aa18.32■□□□□ 0.52
PAAF1-204ENST00000504441 SCAF8Q9UPN6 1271 aaKnown RBP18.32■□□□□ 0.52
PAAF1-204ENST00000504441 TRIM35Q9UPQ4 493 aa18.32■□□□□ 0.52
PAAF1-204ENST00000504441 DUSP27Q5VZP5 1158 aa18.31■□□□□ 0.52
PAAF1-204ENST00000504441 RASAL3Q86YV0 1011 aa18.31■□□□□ 0.52
PAAF1-204ENST00000504441 JARID2Q92833 1246 aaPredicted RBP18.31■□□□□ 0.52
PAAF1-204ENST00000504441 SCN9AQ15858 1988 aa18.31■□□□□ 0.52
PAAF1-204ENST00000504441 HOXB7P09629 217 aa18.3■□□□□ 0.52
PAAF1-204ENST00000504441 RALBP1Q15311 655 aa18.3■□□□□ 0.52
PAAF1-204ENST00000504441 RSBN1LQ6PCB5 846 aaPredicted RBP18.3■□□□□ 0.52
PAAF1-204ENST00000504441 CTU1Q7Z7A3 348 aaKnown RBP18.3■□□□□ 0.52
PAAF1-204ENST00000504441 ZBTB38Q8NAP3 1195 aaPredicted RBP18.3■□□□□ 0.52
PAAF1-204ENST00000504441 PODXL2Q9NZ53 605 aa18.3■□□□□ 0.52
PAAF1-204ENST00000504441 AKAP11Q9UKA4 1901 aa18.29■□□□□ 0.52
PAAF1-204ENST00000504441 GOLGA2Q08379 1002 aa18.29■□□□□ 0.52
PAAF1-204ENST00000504441 MOB2Q70IA6 237 aa18.29■□□□□ 0.52
PAAF1-204ENST00000504441 AGBL3Q8NEM8 1001 aa18.29■□□□□ 0.52
PAAF1-204ENST00000504441 MYD88Q99836 296 aa18.29■□□□□ 0.52
PAAF1-204ENST00000504441 USP17L8P0C7I0 530 aa18.28■□□□□ 0.52
PAAF1-204ENST00000504441 ZNF280AP59817 542 aaPredicted RBP18.28■□□□□ 0.52
PAAF1-204ENST00000504441 TRIM28Q13263 835 aaKnown RBP18.28■□□□□ 0.52
PAAF1-204ENST00000504441 WDR43Q15061 677 aaKnown RBP eCLIP18.28■□□□□ 0.52
PAAF1-204ENST00000504441 CCDC152Q4G0S7 254 aa18.28■□□□□ 0.52
PAAF1-204ENST00000504441 PRAMEF18Q5VWM3 479 aa18.28■□□□□ 0.52
PAAF1-204ENST00000504441 RUNDC1Q96C34 613 aa18.28■□□□□ 0.52
PAAF1-204ENST00000504441 PHAXQ9H814 394 aaKnown RBP18.28■□□□□ 0.52
PAAF1-204ENST00000504441 MYOZ2Q9NPC6 264 aa18.28■□□□□ 0.52
PAAF1-204ENST00000504441 PCDH10Q9P2E7 1040 aa18.28■□□□□ 0.52
PAAF1-204ENST00000504441 TNRC18O15417 2968 aaPredicted RBP18.28■□□□□ 0.52
PAAF1-204ENST00000504441 ELL2O00472 640 aaPredicted RBP18.27■□□□□ 0.52
PAAF1-204ENST00000504441 HSP90B1P14625 803 aaKnown RBP18.27■□□□□ 0.52
PAAF1-204ENST00000504441 TTLL12Q14166 644 aaPredicted RBP18.27■□□□□ 0.52
PAAF1-204ENST00000504441 MBIPQ9NS73 344 aa18.27■□□□□ 0.52
PAAF1-204ENST00000504441 HDAC9Q9UKV0 1011 aa18.27■□□□□ 0.52
PAAF1-204ENST00000504441 UBE2Q2LH0YL09 131 aa18.26■□□□□ 0.51
PAAF1-204ENST00000504441 TBC1D8O95759 1140 aa18.26■□□□□ 0.51
PAAF1-204ENST00000504441 ANKRD18AQ8IVF6 992 aa18.26■□□□□ 0.51
PAAF1-204ENST00000504441 REM2Q8IYK8 340 aaPredicted RBP18.26■□□□□ 0.51
PAAF1-204ENST00000504441 HPS5Q9UPZ3 1129 aa18.26■□□□□ 0.51
PAAF1-204ENST00000504441 XDHP47989 1333 aa18.25■□□□□ 0.51
PAAF1-204ENST00000504441 USP17L3A6NCW0 530 aa18.25■□□□□ 0.51
PAAF1-204ENST00000504441 USP17L4A6NCW7 530 aa18.25■□□□□ 0.51
PAAF1-204ENST00000504441 PDE8AO60658 829 aa18.25■□□□□ 0.51
PAAF1-204ENST00000504441 FKBP1BP68106 108 aa18.25■□□□□ 0.51
PAAF1-204ENST00000504441 MKRN3Q13064 507 aaKnown RBP18.25■□□□□ 0.51
PAAF1-204ENST00000504441 USP17L1Q7RTZ2 530 aa18.25■□□□□ 0.51
PAAF1-204ENST00000504441 FBXW7Q969H0 707 aa18.25■□□□□ 0.51
PAAF1-204ENST00000504441 WTIPA6NIX2 430 aaPredicted RBP18.24■□□□□ 0.51
PAAF1-204ENST00000504441 PCCAP05165 728 aaPredicted RBP18.24■□□□□ 0.51
PAAF1-204ENST00000504441 ZNF296Q8WUU4 475 aaPredicted RBP18.24■□□□□ 0.51
PAAF1-204ENST00000504441 GMLQ99445 158 aa18.24■□□□□ 0.51
PAAF1-204ENST00000504441 MXD3Q9BW11 206 aa18.24■□□□□ 0.51
PAAF1-204ENST00000504441 PAPPA2Q9BXP8 1791 aa18.24■□□□□ 0.51
PAAF1-204ENST00000504441 NBPF9Q3BBW0 867 aa18.23■□□□□ 0.51
PAAF1-204ENST00000504441 CCDC191Q8NCU4 936 aa18.23■□□□□ 0.51
PAAF1-204ENST00000504441 CWC25Q9NXE8 425 aaPredicted RBP18.23■□□□□ 0.51
PAAF1-204ENST00000504441 ADAMTS8Q9UP79 889 aa18.23■□□□□ 0.51
PAAF1-204ENST00000504441 MYBBP1AQ9BQG0 1328 aaKnown RBP18.23■□□□□ 0.51
PAAF1-204ENST00000504441 PITPNM2Q9BZ72 1349 aa18.23■□□□□ 0.51
PAAF1-204ENST00000504441 PDE4DIPQ5VU43 2346 aa18.22■□□□□ 0.51
PAAF1-204ENST00000504441 ATP2B4P23634 1241 aa18.22■□□□□ 0.51
PAAF1-204ENST00000504441 PODNQ7Z5L7 613 aa18.22■□□□□ 0.51
PAAF1-204ENST00000504441 ZNF609O15014 1411 aa18.22■□□□□ 0.51
PAAF1-204ENST00000504441 PRKG1Q13976 671 aa18.21■□□□□ 0.51
PAAF1-204ENST00000504441 PRPF38BQ5VTL8 546 aaKnown RBP18.21■□□□□ 0.51
PAAF1-204ENST00000504441 OGFOD1Q8N543 542 aa18.21■□□□□ 0.51
PAAF1-204ENST00000504441 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.21■□□□□ 0.51
PAAF1-204ENST00000504441 NF2P35240 595 aa18.2■□□□□ 0.5
PAAF1-204ENST00000504441 PKN2Q16513 984 aaKnown RBP18.2■□□□□ 0.5
PAAF1-204ENST00000504441 CDC5LQ99459 802 aaKnown RBP18.2■□□□□ 0.5
PAAF1-204ENST00000504441 SASH1O94885 1247 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms