RNA–Protein interactions for RNA: ENST00000504431.1

UBE2B-204, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 235 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-204ENST00000504431 SAP130Q9H0E3 1048 aa11.01□□□□□ -0.65
UBE2B-204ENST00000504431 NUCKS1Q9H1E3 243 aaKnown RBP11.01□□□□□ -0.65
UBE2B-204ENST00000504431 DNMT3AQ9Y6K1 912 aaPredicted RBP11.01□□□□□ -0.65
UBE2B-204ENST00000504431 SETD1BQ9UPS6 1966 aaKnown RBP11.01□□□□□ -0.65
UBE2B-204ENST00000504431 GCC2Q8IWJ2 1684 aa11.01□□□□□ -0.65
UBE2B-204ENST00000504431 ICMTO60725 284 aa11□□□□□ -0.65
UBE2B-204ENST00000504431 FAM13AO94988 1023 aa11□□□□□ -0.65
UBE2B-204ENST00000504431 ZNF211Q13398 564 aaPredicted RBP11□□□□□ -0.65
UBE2B-204ENST00000504431 NPAS3Q8IXF0 933 aa11□□□□□ -0.65
UBE2B-204ENST00000504431 SUSD3Q96L08 255 aa11□□□□□ -0.65
UBE2B-204ENST00000504431 LRFN2Q9ULH4 789 aa11□□□□□ -0.65
UBE2B-204ENST00000504431 PREX1Q8TCU6 1659 aa11□□□□□ -0.65
UBE2B-204ENST00000504431 HFM1A2PYH4 1435 aa11□□□□□ -0.65
UBE2B-204ENST00000504431 PZPP20742 1482 aa11□□□□□ -0.65
UBE2B-204ENST00000504431 UNC13BO14795 1591 aa10.99□□□□□ -0.65
UBE2B-204ENST00000504431 VWDEQ8N2E2 1590 aa10.99□□□□□ -0.65
UBE2B-204ENST00000504431 ZC3H13Q5T200 1668 aaKnown RBP10.99□□□□□ -0.65
UBE2B-204ENST00000504431 SOWAHDA6NJG2 315 aa10.99□□□□□ -0.65
UBE2B-204ENST00000504431 POTECB2RU33 542 aa10.99□□□□□ -0.65
UBE2B-204ENST00000504431 H3BRB1 525 aa10.99□□□□□ -0.65
UBE2B-204ENST00000504431 SAMD5Q5TGI4 173 aa10.99□□□□□ -0.65
UBE2B-204ENST00000504431 ALKBH2Q6NS38 261 aa10.99□□□□□ -0.65
UBE2B-204ENST00000504431 C7orf43Q8WVR3 580 aa10.99□□□□□ -0.65
UBE2B-204ENST00000504431 IFT43Q96FT9 208 aa10.99□□□□□ -0.65
UBE2B-204ENST00000504431 TUT1Q9H6E5 874 aaKnown RBP10.99□□□□□ -0.65
UBE2B-204ENST00000504431 KLK14Q9P0G3 267 aa10.99□□□□□ -0.65
UBE2B-204ENST00000504431 TNRQ92752 1358 aa10.99□□□□□ -0.65
UBE2B-204ENST00000504431 NPATQ14207 1427 aa10.99□□□□□ -0.65
UBE2B-204ENST00000504431 PPFIA3O75145 1194 aa10.98□□□□□ -0.65
UBE2B-204ENST00000504431 FOXR1Q6PIV2 292 aa10.98□□□□□ -0.65
UBE2B-204ENST00000504431 FAM13BQ9NYF5 915 aa10.98□□□□□ -0.65
UBE2B-204ENST00000504431 NXF1Q9UBU9 619 aaKnown RBP10.98□□□□□ -0.65
UBE2B-204ENST00000504431 UHRF1BP1Q6BDS2 1440 aa10.98□□□□□ -0.65
UBE2B-204ENST00000504431 MYO3AQ8NEV4 1616 aa10.98□□□□□ -0.65
UBE2B-204ENST00000504431 TNFRSF10BO14763 440 aa10.97□□□□□ -0.65
UBE2B-204ENST00000504431 NPR3P17342 541 aa10.97□□□□□ -0.65
UBE2B-204ENST00000504431 LRRC69Q6ZNQ3 347 aa10.97□□□□□ -0.65
UBE2B-204ENST00000504431 ERVK-7P63135 1459 aa10.97□□□□□ -0.65
UBE2B-204ENST00000504431 E9PCH4 1651 aa10.96□□□□□ -0.65
UBE2B-204ENST00000504431 FAM135AQ9P2D6 1515 aa10.96□□□□□ -0.65
UBE2B-204ENST00000504431 SETD5Q9C0A6 1442 aa10.96□□□□□ -0.65
UBE2B-204ENST00000504431 NOM1Q5C9Z4 860 aaKnown RBP10.96□□□□□ -0.65
UBE2B-204ENST00000504431 HSH2DQ96JZ2 352 aa10.96□□□□□ -0.65
UBE2B-204ENST00000504431 PHF24Q9UPV7 400 aa10.96□□□□□ -0.65
UBE2B-204ENST00000504431 IQGAP3Q86VI3 1631 aa10.95□□□□□ -0.66
UBE2B-204ENST00000504431 EFCAB6Q5THR3 1501 aa10.95□□□□□ -0.66
UBE2B-204ENST00000504431 LMTK2Q8IWU2 1503 aa10.95□□□□□ -0.66
UBE2B-204ENST00000504431 RAB3GAP2Q9H2M9 1393 aa10.95□□□□□ -0.66
UBE2B-204ENST00000504431 EPB42P16452 691 aa10.95□□□□□ -0.66
UBE2B-204ENST00000504431 SND1Q7KZF4 910 aaKnown RBP eCLIP10.95□□□□□ -0.66
UBE2B-204ENST00000504431 ZNF837Q96EG3 531 aaPredicted RBP10.95□□□□□ -0.66
UBE2B-204ENST00000504431 TRERF1Q96PN7 1200 aa10.95□□□□□ -0.66
UBE2B-204ENST00000504431 ANO2Q9NQ90 1003 aa10.95□□□□□ -0.66
UBE2B-204ENST00000504431 TET3O43151 1660 aa10.95□□□□□ -0.66
UBE2B-204ENST00000504431 UGGT1Q9NYU2 1555 aa10.94□□□□□ -0.66
UBE2B-204ENST00000504431 MPSTP25325 297 aa10.94□□□□□ -0.66
UBE2B-204ENST00000504431 IDI1Q13907 227 aa10.94□□□□□ -0.66
UBE2B-204ENST00000504431 SV2AQ7L0J3 742 aa10.94□□□□□ -0.66
UBE2B-204ENST00000504431 BTLAQ7Z6A9 289 aa10.94□□□□□ -0.66
UBE2B-204ENST00000504431 TREML1Q86YW5 311 aa10.94□□□□□ -0.66
UBE2B-204ENST00000504431 NANOS1Q8WY41 292 aaKnown RBP10.94□□□□□ -0.66
UBE2B-204ENST00000504431 GZF1Q9H116 711 aaPredicted RBP10.94□□□□□ -0.66
UBE2B-204ENST00000504431 BIN2Q9UBW5 565 aaPredicted RBP10.94□□□□□ -0.66
UBE2B-204ENST00000504431 PCDHGC4Q9Y5F7 938 aa10.94□□□□□ -0.66
UBE2B-204ENST00000504431 SPATA31D1Q6ZQQ2 1576 aa10.94□□□□□ -0.66
UBE2B-204ENST00000504431 CEP170BQ9Y4F5 1589 aaPredicted RBP10.94□□□□□ -0.66
UBE2B-204ENST00000504431 ARHGAP31Q2M1Z3 1444 aa10.93□□□□□ -0.66
UBE2B-204ENST00000504431 CDC14CA4D256 554 aa10.93□□□□□ -0.66
UBE2B-204ENST00000504431 ATXN7O15265 892 aaPredicted RBP10.93□□□□□ -0.66
UBE2B-204ENST00000504431 MICAL2O94851 1124 aa10.93□□□□□ -0.66
UBE2B-204ENST00000504431 FAM157BP0CG42 384 aa10.93□□□□□ -0.66
UBE2B-204ENST00000504431 ARSDP51689 593 aa10.93□□□□□ -0.66
UBE2B-204ENST00000504431 TRIM26Q12899 539 aaPredicted RBP10.93□□□□□ -0.66
UBE2B-204ENST00000504431 MTMR3Q13615 1198 aa10.93□□□□□ -0.66
UBE2B-204ENST00000504431 DBN1Q16643 649 aa10.93□□□□□ -0.66
UBE2B-204ENST00000504431 ZNF280CQ8ND82 737 aa10.93□□□□□ -0.66
UBE2B-204ENST00000504431 ZCCHC2Q9C0B9 1178 aaKnown RBP10.93□□□□□ -0.66
UBE2B-204ENST00000504431 SYNMO15061 1565 aa10.93□□□□□ -0.66
UBE2B-204ENST00000504431 LAMC2Q13753 1193 aa10.92□□□□□ -0.66
UBE2B-204ENST00000504431 SLC16A10Q8TF71 515 aa10.92□□□□□ -0.66
UBE2B-204ENST00000504431 CEP63Q96MT8 703 aa10.92□□□□□ -0.66
UBE2B-204ENST00000504431 MPHOSPH9Q99550 1183 aa10.92□□□□□ -0.66
UBE2B-204ENST00000504431 CUEDC1Q9NWM3 386 aaPredicted RBP10.92□□□□□ -0.66
UBE2B-204ENST00000504431 BCS1LQ9Y276 419 aa10.92□□□□□ -0.66
UBE2B-204ENST00000504431 STRCQ7RTU9 1775 aa10.92□□□□□ -0.66
UBE2B-204ENST00000504431 A2ML1A8K2U0 1454 aa10.92□□□□□ -0.66
UBE2B-204ENST00000504431 PIK3C2BO00750 1634 aa10.91□□□□□ -0.66
UBE2B-204ENST00000504431 ZAP70P43403 619 aa10.91□□□□□ -0.66
UBE2B-204ENST00000504431 EIF1AXP47813 144 aaKnown RBP10.91□□□□□ -0.66
UBE2B-204ENST00000504431 IDH3AP50213 366 aa10.91□□□□□ -0.66
UBE2B-204ENST00000504431 TYRO3Q06418 890 aa10.91□□□□□ -0.66
UBE2B-204ENST00000504431 AAMPQ13685 434 aa10.91□□□□□ -0.66
UBE2B-204ENST00000504431 ETFBKMTQ8IXQ9 262 aa10.91□□□□□ -0.66
UBE2B-204ENST00000504431 ATXN7L1Q9ULK2 861 aaPredicted RBP10.91□□□□□ -0.66
UBE2B-204ENST00000504431 NOS1P29475 1434 aa10.91□□□□□ -0.66
UBE2B-204ENST00000504431 ZNF142P52746 1687 aaPredicted RBP10.9□□□□□ -0.66
UBE2B-204ENST00000504431 RPLP1P05386 114 aaKnown RBP10.9□□□□□ -0.66
UBE2B-204ENST00000504431 PCSK2P16519 638 aa10.9□□□□□ -0.66
UBE2B-204ENST00000504431 CFHR5Q9BXR6 569 aa10.9□□□□□ -0.66
UBE2B-204ENST00000504431 MYO5BQ9ULV0 1848 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms