RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 ADCY5O95622 1261 aa8.21□□□□□ -1.1
SYNPO2-205ENST00000504178 KRT13P13646 458 aa8.21□□□□□ -1.1
SYNPO2-205ENST00000504178 ZNF354CQ86Y25 554 aa8.21□□□□□ -1.1
SYNPO2-205ENST00000504178 OGFOD1Q8N543 542 aa8.21□□□□□ -1.1
SYNPO2-205ENST00000504178 LRRC2Q9BYS8 371 aa8.21□□□□□ -1.1
SYNPO2-205ENST00000504178 SYKP43405 635 aa8.21□□□□□ -1.1
SYNPO2-205ENST00000504178 C16orf71Q8IYS4 520 aaPredicted RBP8.21□□□□□ -1.1
SYNPO2-205ENST00000504178 NECAB1Q8N987 351 aa8.21□□□□□ -1.1
SYNPO2-205ENST00000504178 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.21□□□□□ -1.1
SYNPO2-205ENST00000504178 GRM8O00222 908 aa8.2□□□□□ -1.1
SYNPO2-205ENST00000504178 PHACTR2O75167 634 aa8.2□□□□□ -1.1
SYNPO2-205ENST00000504178 NBPF7P0C2Y1 421 aaPredicted RBP8.2□□□□□ -1.1
SYNPO2-205ENST00000504178 IL2RBP14784 551 aa8.2□□□□□ -1.1
SYNPO2-205ENST00000504178 UBE2HP62256 183 aa8.2□□□□□ -1.1
SYNPO2-205ENST00000504178 MRPL50Q8N5N7 158 aaKnown RBP8.2□□□□□ -1.1
SYNPO2-205ENST00000504178 BRF1Q92994 677 aa8.2□□□□□ -1.1
SYNPO2-205ENST00000504178 ALDH1L1O75891 902 aa8.2□□□□□ -1.1
SYNPO2-205ENST00000504178 BMP15O95972 392 aa8.2□□□□□ -1.1
SYNPO2-205ENST00000504178 IGHDP01880 384 aa8.2□□□□□ -1.1
SYNPO2-205ENST00000504178 ZSCAN22P10073 491 aaPredicted RBP8.2□□□□□ -1.1
SYNPO2-205ENST00000504178 RRP36Q96EU6 259 aaKnown RBP8.2□□□□□ -1.1
SYNPO2-205ENST00000504178 PAG1Q9NWQ8 432 aa8.2□□□□□ -1.1
SYNPO2-205ENST00000504178 CTTNBP2Q8WZ74 1663 aa8.2□□□□□ -1.1
SYNPO2-205ENST00000504178 POLD1P28340 1107 aa8.2□□□□□ -1.1
SYNPO2-205ENST00000504178 IL15P40933 162 aaPredicted RBP8.2□□□□□ -1.1
SYNPO2-205ENST00000504178 RBM25P49756 843 aaKnown RBP8.2□□□□□ -1.1
SYNPO2-205ENST00000504178 KSR2Q6VAB6 950 aa8.2□□□□□ -1.1
SYNPO2-205ENST00000504178 JADE2Q9NQC1 790 aa8.2□□□□□ -1.1
SYNPO2-205ENST00000504178 SNW1Q13573 536 aaKnown RBP8.2□□□□□ -1.1
SYNPO2-205ENST00000504178 MAATS1Q7Z4T9 603 aa8.2□□□□□ -1.1
SYNPO2-205ENST00000504178 USP37Q86T82 979 aa8.2□□□□□ -1.1
SYNPO2-205ENST00000504178 RBM17Q96I25 401 aaKnown RBP8.2□□□□□ -1.1
SYNPO2-205ENST00000504178 MEIS3Q99687 375 aa8.2□□□□□ -1.1
SYNPO2-205ENST00000504178 TTC12Q9H892 705 aaPredicted RBP8.2□□□□□ -1.1
SYNPO2-205ENST00000504178 RBM8AQ9Y5S9 174 aaKnown RBP8.2□□□□□ -1.1
SYNPO2-205ENST00000504178 ZNF608Q9ULD9 1512 aaPredicted RBP8.2□□□□□ -1.1
SYNPO2-205ENST00000504178 GOLGA6L9A6NEM1 432 aa8.2□□□□□ -1.1
SYNPO2-205ENST00000504178 GNAQP50148 359 aa8.2□□□□□ -1.1
SYNPO2-205ENST00000504178 NMIQ13287 307 aaPredicted RBP8.2□□□□□ -1.1
SYNPO2-205ENST00000504178 A2MP01023 1474 aa8.2□□□□□ -1.1
SYNPO2-205ENST00000504178 ASXL2Q76L83 1435 aa8.2□□□□□ -1.1
SYNPO2-205ENST00000504178 RIMBP2O15034 1052 aa8.19□□□□□ -1.1
SYNPO2-205ENST00000504178 LMBR1LQ6UX01 489 aa8.19□□□□□ -1.1
SYNPO2-205ENST00000504178 C16orf45Q96MC5 204 aaPredicted RBP8.19□□□□□ -1.1
SYNPO2-205ENST00000504178 RTCBQ9Y3I0 505 aaKnown RBP8.19□□□□□ -1.1
SYNPO2-205ENST00000504178 SDSP20132 328 aa8.19□□□□□ -1.1
SYNPO2-205ENST00000504178 RBM26Q5T8P6 1007 aaKnown RBP8.19□□□□□ -1.1
SYNPO2-205ENST00000504178 SLC9C2Q5TAH2 1124 aa8.19□□□□□ -1.1
SYNPO2-205ENST00000504178 MAGEB6Q8N7X4 407 aa8.19□□□□□ -1.1
SYNPO2-205ENST00000504178 ARHGAP45Q92619 1136 aa8.19□□□□□ -1.1
SYNPO2-205ENST00000504178 LRRC59Q96AG4 307 aaKnown RBP8.19□□□□□ -1.1
SYNPO2-205ENST00000504178 LRRC45Q96CN5 670 aa8.19□□□□□ -1.1
SYNPO2-205ENST00000504178 C6orf50Q9HD87 102 aa8.19□□□□□ -1.1
SYNPO2-205ENST00000504178 MRVI1Q9Y6F6 885 aa8.19□□□□□ -1.1
SYNPO2-205ENST00000504178 GNAT2P19087 354 aa8.19□□□□□ -1.1
SYNPO2-205ENST00000504178 KRT2P35908 639 aa8.19□□□□□ -1.1
SYNPO2-205ENST00000504178 CTR9Q6PD62 1173 aa8.19□□□□□ -1.1
SYNPO2-205ENST00000504178 MICALCLQ6ZW33 695 aa8.19□□□□□ -1.1
SYNPO2-205ENST00000504178 CTAGE1Q96RT6 745 aa8.19□□□□□ -1.1
SYNPO2-205ENST00000504178 SSX2IPQ9Y2D8 614 aa8.19□□□□□ -1.1
SYNPO2-205ENST00000504178 N4BP3O15049 544 aa8.19□□□□□ -1.1
SYNPO2-205ENST00000504178 MRPS9P82933 396 aaKnown RBP8.19□□□□□ -1.1
SYNPO2-205ENST00000504178 EIF4A2Q14240 407 aaKnown RBP8.19□□□□□ -1.1
SYNPO2-205ENST00000504178 RNF187Q5TA31 235 aaPredicted RBP8.19□□□□□ -1.1
SYNPO2-205ENST00000504178 EHBP1Q8NDI1 1231 aa8.19□□□□□ -1.1
SYNPO2-205ENST00000504178 MAP3K5Q99683 1374 aa8.19□□□□□ -1.1
SYNPO2-205ENST00000504178 ATP8B2P98198 1209 aa8.19□□□□□ -1.1
SYNPO2-205ENST00000504178 RGS22Q8NE09 1264 aa8.19□□□□□ -1.1
SYNPO2-205ENST00000504178 TFCP2L1Q9NZI6 479 aa8.19□□□□□ -1.1
SYNPO2-205ENST00000504178 FSD2A1L4K1 749 aa8.18□□□□□ -1.1
SYNPO2-205ENST00000504178 RNF113AO15541 343 aaKnown RBP8.18□□□□□ -1.1
SYNPO2-205ENST00000504178 FERP16591 822 aa8.18□□□□□ -1.1
SYNPO2-205ENST00000504178 ACTN2P35609 894 aa8.18□□□□□ -1.1
SYNPO2-205ENST00000504178 TMX3Q96JJ7 454 aa8.18□□□□□ -1.1
SYNPO2-205ENST00000504178 GPATCH8Q9UKJ3 1502 aaKnown RBP8.18□□□□□ -1.1
SYNPO2-205ENST00000504178 SPECC1Q5M775 1068 aa8.18□□□□□ -1.1
SYNPO2-205ENST00000504178 KCNG4Q8TDN1 519 aa8.18□□□□□ -1.1
SYNPO2-205ENST00000504178 ESYT1Q9BSJ8 1104 aa8.18□□□□□ -1.1
SYNPO2-205ENST00000504178 ANKRD2Q9GZV1 360 aa8.18□□□□□ -1.1
SYNPO2-205ENST00000504178 CNPY2Q9Y2B0 182 aa8.18□□□□□ -1.1
SYNPO2-205ENST00000504178 ZNF518AQ6AHZ1 1483 aa8.18□□□□□ -1.1
SYNPO2-205ENST00000504178 HDAC1Q13547 482 aaPredicted RBP8.18□□□□□ -1.1
SYNPO2-205ENST00000504178 UVSSAQ2YD98 709 aa8.18□□□□□ -1.1
SYNPO2-205ENST00000504178 GRIPAP1Q4V328 841 aa8.18□□□□□ -1.1
SYNPO2-205ENST00000504178 CABLES1Q8TDN4 633 aa8.18□□□□□ -1.1
SYNPO2-205ENST00000504178 CEP63Q96MT8 703 aa8.18□□□□□ -1.1
SYNPO2-205ENST00000504178 PCDH11XQ9BZA7 1347 aa8.18□□□□□ -1.1
SYNPO2-205ENST00000504178 PCDH11YQ9BZA8 1340 aa8.18□□□□□ -1.1
SYNPO2-205ENST00000504178 IRS4O14654 1257 aaPredicted RBP8.18□□□□□ -1.1
SYNPO2-205ENST00000504178 ASIC1P78348 528 aa8.18□□□□□ -1.1
SYNPO2-205ENST00000504178 PLCH2O75038 1416 aa8.18□□□□□ -1.1
SYNPO2-205ENST00000504178 MTHFSDQ2M296 383 aaKnown RBP8.18□□□□□ -1.1
SYNPO2-205ENST00000504178 ZSCAN23Q3MJ62 389 aa8.18□□□□□ -1.1
SYNPO2-205ENST00000504178 PA2G4Q9UQ80 394 aaKnown RBP8.18□□□□□ -1.1
SYNPO2-205ENST00000504178 SPDYE3A6NKU9 549 aa8.18□□□□□ -1.1
SYNPO2-205ENST00000504178 TMEM110-MUSTN1A8MSY1 372 aa8.18□□□□□ -1.1
SYNPO2-205ENST00000504178 B4DLN1 442 aa8.18□□□□□ -1.1
SYNPO2-205ENST00000504178 POLR3GO15318 223 aaPredicted RBP8.18□□□□□ -1.1
SYNPO2-205ENST00000504178 FAM13AO94988 1023 aa8.18□□□□□ -1.1
SYNPO2-205ENST00000504178 MRPL12P52815 198 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms