RNA–Protein interactions for RNA: ENST00000504147.5

CDK7-203, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-203ENST00000504147 ATP2B3Q16720 1220 aa12.4□□□□□ -0.42
CDK7-203ENST00000504147 CCDC158Q5M9N0 1113 aa12.4□□□□□ -0.42
CDK7-203ENST00000504147 KIAA1211Q6ZU35 1233 aa12.4□□□□□ -0.42
CDK7-203ENST00000504147 EDC3Q96F86 508 aaKnown RBP12.4□□□□□ -0.42
CDK7-203ENST00000504147 XAGE2Q96GT9 111 aa12.4□□□□□ -0.42
CDK7-203ENST00000504147 DNAJC2Q99543 621 aaKnown RBP12.4□□□□□ -0.42
CDK7-203ENST00000504147 LSG1Q9H089 658 aaKnown RBP12.4□□□□□ -0.42
CDK7-203ENST00000504147 SEC31BQ9NQW1 1179 aa12.4□□□□□ -0.42
CDK7-203ENST00000504147 RTL9Q8NET4 1388 aa12.4□□□□□ -0.42
CDK7-203ENST00000504147 NUP98P52948 1817 aa12.39□□□□□ -0.43
CDK7-203ENST00000504147 PDE8BO95263 885 aa12.39□□□□□ -0.43
CDK7-203ENST00000504147 IFIT1P09914 478 aaKnown RBP12.39□□□□□ -0.43
CDK7-203ENST00000504147 IGHMBP2P38935 993 aaKnown RBP12.39□□□□□ -0.43
CDK7-203ENST00000504147 TTC39AQ5SRH9 613 aa12.39□□□□□ -0.43
CDK7-203ENST00000504147 TPTE2Q6XPS3 522 aa12.39□□□□□ -0.43
CDK7-203ENST00000504147 NBPF5PQ86XG9 351 aaPredicted RBP12.39□□□□□ -0.43
CDK7-203ENST00000504147 VGLL2Q8N8G2 317 aa12.39□□□□□ -0.43
CDK7-203ENST00000504147 MPHOSPH8Q99549 860 aa12.39□□□□□ -0.43
CDK7-203ENST00000504147 ANKRD36CQ5JPF3 1778 aa12.38□□□□□ -0.43
CDK7-203ENST00000504147 RIC1Q4ADV7 1423 aa12.38□□□□□ -0.43
CDK7-203ENST00000504147 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.38□□□□□ -0.43
CDK7-203ENST00000504147 ANAPC15P60006 121 aa12.38□□□□□ -0.43
CDK7-203ENST00000504147 TXNRD1Q16881 649 aa12.38□□□□□ -0.43
CDK7-203ENST00000504147 C3orf67Q6ZVT6 689 aa12.38□□□□□ -0.43
CDK7-203ENST00000504147 TICAM2Q86XR7 235 aa12.38□□□□□ -0.43
CDK7-203ENST00000504147 PROM2Q8N271 834 aa12.38□□□□□ -0.43
CDK7-203ENST00000504147 FAM227BQ96M60 508 aa12.38□□□□□ -0.43
CDK7-203ENST00000504147 CDC5LQ99459 802 aaKnown RBP12.38□□□□□ -0.43
CDK7-203ENST00000504147 SNRKQ9NRH2 765 aa12.38□□□□□ -0.43
CDK7-203ENST00000504147 PAG1Q9NWQ8 432 aa12.38□□□□□ -0.43
CDK7-203ENST00000504147 NDUFB9Q9Y6M9 179 aa12.38□□□□□ -0.43
CDK7-203ENST00000504147 GOLIM4O00461 696 aa12.37□□□□□ -0.43
CDK7-203ENST00000504147 HSPA4P34932 840 aa12.37□□□□□ -0.43
CDK7-203ENST00000504147 PUM3Q15397 648 aaKnown RBP12.37□□□□□ -0.43
CDK7-203ENST00000504147 DDX46Q7L014 1031 aaKnown RBP12.37□□□□□ -0.43
CDK7-203ENST00000504147 KBTBD3Q8NAB2 608 aa12.37□□□□□ -0.43
CDK7-203ENST00000504147 HELBQ8NG08 1087 aaPredicted RBP12.37□□□□□ -0.43
CDK7-203ENST00000504147 LPIN2Q92539 896 aa12.37□□□□□ -0.43
CDK7-203ENST00000504147 IL17RAQ96F46 866 aa12.37□□□□□ -0.43
CDK7-203ENST00000504147 NLRP3Q96P20 1036 aa12.37□□□□□ -0.43
CDK7-203ENST00000504147 RAD50Q92878 1312 aa12.37□□□□□ -0.43
CDK7-203ENST00000504147 RFX7Q2KHR2 1363 aa12.36□□□□□ -0.43
CDK7-203ENST00000504147 A0A0D9SFI3 127 aa12.36□□□□□ -0.43
CDK7-203ENST00000504147 PLSCR1O15162 318 aa12.36□□□□□ -0.43
CDK7-203ENST00000504147 APBA3O96018 575 aa12.36□□□□□ -0.43
CDK7-203ENST00000504147 FGFR2P21802 821 aa12.36□□□□□ -0.43
CDK7-203ENST00000504147 SSFA2P28290 1259 aa12.36□□□□□ -0.43
CDK7-203ENST00000504147 NFIXQ14938 502 aa12.36□□□□□ -0.43
CDK7-203ENST00000504147 ANKRD18AQ8IVF6 992 aa12.36□□□□□ -0.43
CDK7-203ENST00000504147 PALD1Q9ULE6 856 aa12.36□□□□□ -0.43
CDK7-203ENST00000504147 TUBGCP6Q96RT7 1819 aa12.36□□□□□ -0.43
CDK7-203ENST00000504147 LY75O60449 1722 aa12.36□□□□□ -0.43
CDK7-203ENST00000504147 SBF2Q86WG5 1849 aa12.35□□□□□ -0.43
CDK7-203ENST00000504147 ABCC12Q96J65 1359 aa12.35□□□□□ -0.43
CDK7-203ENST00000504147 C4BP0C0L5 1744 aa12.35□□□□□ -0.43
CDK7-203ENST00000504147 CD2BP2O95400 341 aaKnown RBP12.35□□□□□ -0.43
CDK7-203ENST00000504147 SLC5A1P13866 664 aa12.35□□□□□ -0.43
CDK7-203ENST00000504147 PTH1RQ03431 593 aa12.35□□□□□ -0.43
CDK7-203ENST00000504147 ZNF512BQ96KM6 892 aaPredicted RBP12.35□□□□□ -0.43
CDK7-203ENST00000504147 RGS17Q9UGC6 210 aaPredicted RBP12.35□□□□□ -0.43
CDK7-203ENST00000504147 BCORQ6W2J9 1755 aa12.34□□□□□ -0.43
CDK7-203ENST00000504147 K7ELQ4 463 aaPredicted RBP12.34□□□□□ -0.43
CDK7-203ENST00000504147 RNF113AO15541 343 aaKnown RBP12.34□□□□□ -0.43
CDK7-203ENST00000504147 ST18O60284 1047 aa12.34□□□□□ -0.43
CDK7-203ENST00000504147 TAF5LO75529 589 aa12.34□□□□□ -0.43
CDK7-203ENST00000504147 UQCRFS1P1P0C7P4 283 aa12.34□□□□□ -0.43
CDK7-203ENST00000504147 GYS1P13807 737 aa12.34□□□□□ -0.43
CDK7-203ENST00000504147 FKBP4Q02790 459 aaKnown RBP eCLIP12.34□□□□□ -0.43
CDK7-203ENST00000504147 MCMDC2Q4G0Z9 681 aa12.34□□□□□ -0.43
CDK7-203ENST00000504147 POTEAQ6S8J7 498 aa12.34□□□□□ -0.43
CDK7-203ENST00000504147 CCDC24Q8N4L8 307 aa12.34□□□□□ -0.43
CDK7-203ENST00000504147 SPRYD3Q8NCJ5 442 aa12.34□□□□□ -0.43
CDK7-203ENST00000504147 FBXO41Q8TF61 875 aa12.34□□□□□ -0.43
CDK7-203ENST00000504147 ANP32EQ9BTT0 268 aa12.34□□□□□ -0.43
CDK7-203ENST00000504147 BSDC1Q9NW68 430 aaPredicted RBP12.34□□□□□ -0.43
CDK7-203ENST00000504147 CCDC171Q6TFL3 1326 aa12.34□□□□□ -0.43
CDK7-203ENST00000504147 CARMIL3Q8ND23 1372 aa12.33□□□□□ -0.44
CDK7-203ENST00000504147 NPHP1O15259 732 aa12.33□□□□□ -0.44
CDK7-203ENST00000504147 TM4SF1P30408 202 aa12.33□□□□□ -0.44
CDK7-203ENST00000504147 ZAP70P43403 619 aa12.33□□□□□ -0.44
CDK7-203ENST00000504147 NEK4P51957 841 aa12.33□□□□□ -0.44
CDK7-203ENST00000504147 RPS8P62241 208 aaKnown RBP12.33□□□□□ -0.44
CDK7-203ENST00000504147 CHRNDQ07001 517 aa12.33□□□□□ -0.44
CDK7-203ENST00000504147 SCARF1Q14162 830 aa12.33□□□□□ -0.44
CDK7-203ENST00000504147 LRRFIP1Q32MZ4 808 aaKnown RBP12.33□□□□□ -0.44
CDK7-203ENST00000504147 CCDC102BQ68D86 513 aa12.33□□□□□ -0.44
CDK7-203ENST00000504147 MAP4K1Q92918 833 aa12.33□□□□□ -0.44
CDK7-203ENST00000504147 KCNB2Q92953 911 aa12.33□□□□□ -0.44
CDK7-203ENST00000504147 SLKQ9H2G2 1235 aaPredicted RBP12.33□□□□□ -0.44
CDK7-203ENST00000504147 ANTXR1Q9H6X2 564 aa12.33□□□□□ -0.44
CDK7-203ENST00000504147 HELLSQ9NRZ9 838 aa12.33□□□□□ -0.44
CDK7-203ENST00000504147 SNX14Q9Y5W7 946 aa12.33□□□□□ -0.44
CDK7-203ENST00000504147 SCN7AQ01118 1682 aa12.32□□□□□ -0.44
CDK7-203ENST00000504147 MED23Q9ULK4 1368 aa12.32□□□□□ -0.44
CDK7-203ENST00000504147 CHGBP05060 677 aa12.32□□□□□ -0.44
CDK7-203ENST00000504147 ARID4AP29374 1257 aaPredicted RBP12.32□□□□□ -0.44
CDK7-203ENST00000504147 PHKA1P46020 1223 aa12.32□□□□□ -0.44
CDK7-203ENST00000504147 KCNJ4P48050 445 aa12.32□□□□□ -0.44
CDK7-203ENST00000504147 ZMYM1Q5SVZ6 1142 aa12.32□□□□□ -0.44
CDK7-203ENST00000504147 PRPF40BQ6NWY9 871 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms