RNA–Protein interactions for RNA: ENST00000504073.1

SGCA-204, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-204ENST00000504073 TFCP2Q12800 502 aa18.46■□□□□ 0.55
SGCA-204ENST00000504073 MSL1Q68DK7 614 aa18.46■□□□□ 0.55
SGCA-204ENST00000504073 TMC4Q7Z404 712 aa18.46■□□□□ 0.55
SGCA-204ENST00000504073 PLEKHM2Q8IWE5 1019 aa18.46■□□□□ 0.55
SGCA-204ENST00000504073 OSBPL3Q9H4L5 887 aa18.46■□□□□ 0.55
SGCA-204ENST00000504073 PDE1AP54750 535 aa18.45■□□□□ 0.54
SGCA-204ENST00000504073 RPS8P62241 208 aaKnown RBP18.45■□□□□ 0.54
SGCA-204ENST00000504073 TNNI3KQ59H18 835 aa18.45■□□□□ 0.54
SGCA-204ENST00000504073 BMP2KLQ5H9B9 411 aa18.45■□□□□ 0.54
SGCA-204ENST00000504073 ATG9AQ7Z3C6 839 aa18.45■□□□□ 0.54
SGCA-204ENST00000504073 BSDC1Q9NW68 430 aaPredicted RBP18.45■□□□□ 0.54
SGCA-204ENST00000504073 FPGT-TNNI3KV9GXZ4 949 aa18.45■□□□□ 0.54
SGCA-204ENST00000504073 NRXN2Q9P2S2 1712 aa18.44■□□□□ 0.54
SGCA-204ENST00000504073 GLRX3O76003 335 aaKnown RBP18.44■□□□□ 0.54
SGCA-204ENST00000504073 LRRC24Q50LG9 513 aa18.44■□□□□ 0.54
SGCA-204ENST00000504073 GORABQ5T7V8 394 aa18.44■□□□□ 0.54
SGCA-204ENST00000504073 ANKRD2Q9GZV1 360 aa18.44■□□□□ 0.54
SGCA-204ENST00000504073 SEC31BQ9NQW1 1179 aa18.44■□□□□ 0.54
SGCA-204ENST00000504073 ECHDC1Q9NTX5 307 aa18.44■□□□□ 0.54
SGCA-204ENST00000504073 STAP2Q9UGK3 403 aa18.44■□□□□ 0.54
SGCA-204ENST00000504073 RIPOR2Q9Y4F9 1068 aa18.44■□□□□ 0.54
SGCA-204ENST00000504073 ALDH1B1P30837 517 aa18.43■□□□□ 0.54
SGCA-204ENST00000504073 GRAPQ13588 217 aa18.43■□□□□ 0.54
SGCA-204ENST00000504073 CRY2Q49AN0 593 aa18.43■□□□□ 0.54
SGCA-204ENST00000504073 CASC1Q6TDU7 716 aa18.43■□□□□ 0.54
SGCA-204ENST00000504073 GRAPLQ8TC17 118 aaPredicted RBP18.43■□□□□ 0.54
SGCA-204ENST00000504073 NEUROD6Q96NK8 337 aa18.43■□□□□ 0.54
SGCA-204ENST00000504073 BBOX1O75936 387 aa18.42■□□□□ 0.54
SGCA-204ENST00000504073 PDE8BO95263 885 aa18.42■□□□□ 0.54
SGCA-204ENST00000504073 IFIT1P09914 478 aaKnown RBP18.42■□□□□ 0.54
SGCA-204ENST00000504073 SLC5A1P13866 664 aa18.42■□□□□ 0.54
SGCA-204ENST00000504073 NPR1P16066 1061 aa18.42■□□□□ 0.54
SGCA-204ENST00000504073 PUM3Q15397 648 aaKnown RBP18.42■□□□□ 0.54
SGCA-204ENST00000504073 CCDC158Q5M9N0 1113 aa18.42■□□□□ 0.54
SGCA-204ENST00000504073 TTC22Q5TAA0 569 aa18.42■□□□□ 0.54
SGCA-204ENST00000504073 CCDC24Q8N4L8 307 aa18.42■□□□□ 0.54
SGCA-204ENST00000504073 CRAMP1Q96RY5 1269 aa18.42■□□□□ 0.54
SGCA-204ENST00000504073 PUS3Q9BZE2 481 aaKnown RBP18.42■□□□□ 0.54
SGCA-204ENST00000504073 KLRG2A4D1S0 409 aaPredicted RBP18.41■□□□□ 0.54
SGCA-204ENST00000504073 H0YIN7 160 aa18.41■□□□□ 0.54
SGCA-204ENST00000504073 HSPA6P17066 643 aa18.41■□□□□ 0.54
SGCA-204ENST00000504073 HOXA10P31260 410 aaPredicted RBP18.41■□□□□ 0.54
SGCA-204ENST00000504073 ATP2B3Q16720 1220 aa18.41■□□□□ 0.54
SGCA-204ENST00000504073 C16orf71Q8IYS4 520 aaPredicted RBP18.41■□□□□ 0.54
SGCA-204ENST00000504073 NLGN2Q8NFZ4 835 aa18.41■□□□□ 0.54
SGCA-204ENST00000504073 EAF2Q96CJ1 260 aaPredicted RBP18.41■□□□□ 0.54
SGCA-204ENST00000504073 A0A1B0GUL7 405 aa18.4■□□□□ 0.54
SGCA-204ENST00000504073 KCNJ4P48050 445 aa18.4■□□□□ 0.54
SGCA-204ENST00000504073 C3orf67Q6ZVT6 689 aa18.4■□□□□ 0.54
SGCA-204ENST00000504073 SKAP1Q86WV1 359 aa18.4■□□□□ 0.54
SGCA-204ENST00000504073 LPIN2Q92539 896 aa18.4■□□□□ 0.54
SGCA-204ENST00000504073 MASTLQ96GX5 879 aa18.4■□□□□ 0.54
SGCA-204ENST00000504073 ZNF609O15014 1411 aa18.4■□□□□ 0.54
SGCA-204ENST00000504073 CHRNDQ07001 517 aa18.39■□□□□ 0.53
SGCA-204ENST00000504073 CNTROBQ8N137 903 aa18.39■□□□□ 0.53
SGCA-204ENST00000504073 CELF1Q92879 486 aaKnown RBP18.39■□□□□ 0.53
SGCA-204ENST00000504073 CCDC8Q9H0W5 538 aaPredicted RBP18.39■□□□□ 0.53
SGCA-204ENST00000504073 SALL3Q9BXA9 1300 aa18.39■□□□□ 0.53
SGCA-204ENST00000504073 TNRC6CQ9HCJ0 1690 aaKnown RBP18.38■□□□□ 0.53
SGCA-204ENST00000504073 YBX3P16989 372 aaKnown RBP eCLIP18.38■□□□□ 0.53
SGCA-204ENST00000504073 TRIM6-TRIM34B2RNG4 842 aa18.37■□□□□ 0.53
SGCA-204ENST00000504073 UBE4AQ14139 1066 aa18.37■□□□□ 0.53
SGCA-204ENST00000504073 TTC39AQ5SRH9 613 aa18.37■□□□□ 0.53
SGCA-204ENST00000504073 STYK1Q6J9G0 422 aa18.37■□□□□ 0.53
SGCA-204ENST00000504073 C2CD5Q86YS7 1000 aa18.37■□□□□ 0.53
SGCA-204ENST00000504073 OTUD7AQ8TE49 926 aaPredicted RBP18.37■□□□□ 0.53
SGCA-204ENST00000504073 CNKSR1Q969H4 720 aa18.37■□□□□ 0.53
SGCA-204ENST00000504073 SPEF2Q9C093 1822 aa18.37■□□□□ 0.53
SGCA-204ENST00000504073 UQCRFS1P1P0C7P4 283 aa18.36■□□□□ 0.53
SGCA-204ENST00000504073 SRGNP10124 158 aa18.36■□□□□ 0.53
SGCA-204ENST00000504073 ATP5JP18859 108 aa18.36■□□□□ 0.53
SGCA-204ENST00000504073 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.36■□□□□ 0.53
SGCA-204ENST00000504073 GNL3LQ9NVN8 582 aaKnown RBP18.36■□□□□ 0.53
SGCA-204ENST00000504073 MINPP1Q9UNW1 487 aa18.36■□□□□ 0.53
SGCA-204ENST00000504073 CDC45O75419 566 aa18.35■□□□□ 0.53
SGCA-204ENST00000504073 LRRFIP1Q32MZ4 808 aaKnown RBP18.35■□□□□ 0.53
SGCA-204ENST00000504073 CAVIN4Q5BKX8 364 aa18.35■□□□□ 0.53
SGCA-204ENST00000504073 VGLL2Q8N8G2 317 aa18.35■□□□□ 0.53
SGCA-204ENST00000504073 XAGE2Q96GT9 111 aa18.35■□□□□ 0.53
SGCA-204ENST00000504073 DBNDD2Q9BQY9 259 aa18.35■□□□□ 0.53
SGCA-204ENST00000504073 UPF2Q9HAU5 1272 aaKnown RBP18.35■□□□□ 0.53
SGCA-204ENST00000504073 ANKIB1Q9P2G1 1089 aa18.35■□□□□ 0.53
SGCA-204ENST00000504073 DBNLQ9UJU6 430 aaKnown RBP18.35■□□□□ 0.53
SGCA-204ENST00000504073 LEMD3Q9Y2U8 911 aa18.35■□□□□ 0.53
SGCA-204ENST00000504073 XDHP47989 1333 aa18.34■□□□□ 0.53
SGCA-204ENST00000504073 PPEF1O14829 653 aaPredicted RBP18.34■□□□□ 0.53
SGCA-204ENST00000504073 TIMM10P62072 90 aa18.34■□□□□ 0.53
SGCA-204ENST00000504073 ZNF622Q969S3 477 aaKnown RBP eCLIP18.34■□□□□ 0.53
SGCA-204ENST00000504073 GPBP1L1Q9HC44 474 aaPredicted RBP18.34■□□□□ 0.53
SGCA-204ENST00000504073 ANKRD31Q8N7Z5 1873 aa18.33■□□□□ 0.53
SGCA-204ENST00000504073 HIP1O00291 1037 aa18.33■□□□□ 0.52
SGCA-204ENST00000504073 GRIPAP1Q4V328 841 aa18.33■□□□□ 0.52
SGCA-204ENST00000504073 TICAM2Q86XR7 235 aa18.33■□□□□ 0.52
SGCA-204ENST00000504073 VPS37DQ86XT2 251 aa18.33■□□□□ 0.52
SGCA-204ENST00000504073 SP8Q8IXZ3 490 aa18.33■□□□□ 0.52
SGCA-204ENST00000504073 PI4K2BQ8TCG2 481 aa18.33■□□□□ 0.52
SGCA-204ENST00000504073 ZNF526Q8TF50 670 aaPredicted RBP18.33■□□□□ 0.52
SGCA-204ENST00000504073 RILPL2Q969X0 211 aa18.33■□□□□ 0.52
SGCA-204ENST00000504073 EVI5LQ96CN4 794 aa18.33■□□□□ 0.52
SGCA-204ENST00000504073 C10orf71Q711Q0 1435 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms