RNA–Protein interactions for RNA: ENST00000504047.1

ATXN3-208, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-208ENST00000504047 HFE2Q6ZVN8 426 aa5.67□□□□□ -1.5
ATXN3-208ENST00000504047 ALYREFQ86V81 257 aaKnown RBP5.67□□□□□ -1.5
ATXN3-208ENST00000504047 GJD3Q8N144 294 aa5.67□□□□□ -1.5
ATXN3-208ENST00000504047 TMC1Q8TDI8 760 aa5.67□□□□□ -1.5
ATXN3-208ENST00000504047 NUDT8Q8WV74 236 aa5.67□□□□□ -1.5
ATXN3-208ENST00000504047 NSUN5Q96P11 429 aaKnown RBP5.67□□□□□ -1.5
ATXN3-208ENST00000504047 GGNBP2Q9H3C7 697 aa5.67□□□□□ -1.5
ATXN3-208ENST00000504047 PRDM6Q9NQX0 595 aa5.67□□□□□ -1.5
ATXN3-208ENST00000504047 CCDC87Q9NVE4 849 aa5.67□□□□□ -1.5
ATXN3-208ENST00000504047 A6NHS1 94 aa5.66□□□□□ -1.5
ATXN3-208ENST00000504047 CES1P23141 567 aa5.66□□□□□ -1.5
ATXN3-208ENST00000504047 KCNMA1Q12791 1236 aa5.66□□□□□ -1.5
ATXN3-208ENST00000504047 PERM1Q5SV97 790 aa5.66□□□□□ -1.5
ATXN3-208ENST00000504047 LINC00114Q6XXX2 140 aa5.66□□□□□ -1.5
ATXN3-208ENST00000504047 NCAPG2Q86XI2 1143 aa5.66□□□□□ -1.5
ATXN3-208ENST00000504047 SNX29Q8TEQ0 813 aa5.66□□□□□ -1.5
ATXN3-208ENST00000504047 NAGPAQ9UK23 515 aa5.66□□□□□ -1.5
ATXN3-208ENST00000504047 STARD13Q9Y3M8 1113 aa5.66□□□□□ -1.5
ATXN3-208ENST00000504047 J3QW42 95 aa5.65□□□□□ -1.5
ATXN3-208ENST00000504047 PHACTR2O75167 634 aa5.65□□□□□ -1.5
ATXN3-208ENST00000504047 HOXB4P17483 251 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-208ENST00000504047 ECM1Q16610 540 aa5.65□□□□□ -1.5
ATXN3-208ENST00000504047 C20orf204Q6ZNR8 217 aa5.65□□□□□ -1.5
ATXN3-208ENST00000504047 TTC9Q92623 222 aa5.65□□□□□ -1.5
ATXN3-208ENST00000504047 LPIN3Q9BQK8 851 aa5.65□□□□□ -1.5
ATXN3-208ENST00000504047 SMG9Q9H0W8 520 aaKnown RBP5.65□□□□□ -1.5
ATXN3-208ENST00000504047 TNFRSF21O75509 655 aa5.64□□□□□ -1.51
ATXN3-208ENST00000504047 SMNDC1O75940 238 aaKnown RBP eCLIP5.64□□□□□ -1.51
ATXN3-208ENST00000504047 RASSF7Q02833 373 aa5.64□□□□□ -1.51
ATXN3-208ENST00000504047 C8orf86Q6ZUL3 223 aa5.64□□□□□ -1.51
ATXN3-208ENST00000504047 CACTIN-AS1Q8N1I8 211 aa5.64□□□□□ -1.51
ATXN3-208ENST00000504047 C1orf127Q8N9H9 656 aa5.64□□□□□ -1.51
ATXN3-208ENST00000504047 PLD4Q96BZ4 506 aa5.64□□□□□ -1.51
ATXN3-208ENST00000504047 DMRTB1Q96MA1 342 aa5.64□□□□□ -1.51
ATXN3-208ENST00000504047 PLVAPQ9BX97 442 aa5.64□□□□□ -1.51
ATXN3-208ENST00000504047 DCTN4Q9UJW0 460 aa5.64□□□□□ -1.51
ATXN3-208ENST00000504047 FAM177BA6PVY3 158 aa5.63□□□□□ -1.51
ATXN3-208ENST00000504047 KIF4AO95239 1232 aa5.63□□□□□ -1.51
ATXN3-208ENST00000504047 GDF11O95390 407 aa5.63□□□□□ -1.51
ATXN3-208ENST00000504047 MAPK1P28482 360 aa5.63□□□□□ -1.51
ATXN3-208ENST00000504047 AFF1P51825 1210 aaKnown RBP5.63□□□□□ -1.51
ATXN3-208ENST00000504047 PRRT3Q5FWE3 981 aa5.63□□□□□ -1.51
ATXN3-208ENST00000504047 TRAPPC3LQ5T215 181 aa5.63□□□□□ -1.51
ATXN3-208ENST00000504047 HOMEZQ8IX15 550 aa5.63□□□□□ -1.51
ATXN3-208ENST00000504047 TMEM151AQ8N4L1 468 aa5.63□□□□□ -1.51
ATXN3-208ENST00000504047 RBCK1Q9BYM8 510 aa5.63□□□□□ -1.51
ATXN3-208ENST00000504047 CNTN3Q9P232 1028 aa5.63□□□□□ -1.51
ATXN3-208ENST00000504047 KANSL3Q9P2N6 904 aa5.63□□□□□ -1.51
ATXN3-208ENST00000504047 AMOTL2Q9Y2J4 779 aa5.63□□□□□ -1.51
ATXN3-208ENST00000504047 CYP2E1P05181 493 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-208ENST00000504047 EDN3P14138 238 aa5.62□□□□□ -1.51
ATXN3-208ENST00000504047 NID1P14543 1247 aa5.62□□□□□ -1.51
ATXN3-208ENST00000504047 TRIM28Q13263 835 aaKnown RBP5.62□□□□□ -1.51
ATXN3-208ENST00000504047 MSL1Q68DK7 614 aa5.62□□□□□ -1.51
ATXN3-208ENST00000504047 WFDC8Q8IUA0 241 aa5.62□□□□□ -1.51
ATXN3-208ENST00000504047 TRIM11Q96F44 468 aa5.62□□□□□ -1.51
ATXN3-208ENST00000504047 FAM129BQ96TA1 746 aa5.62□□□□□ -1.51
ATXN3-208ENST00000504047 SALL4Q9UJQ4 1053 aa5.62□□□□□ -1.51
ATXN3-208ENST00000504047 RAC1P63000 192 aa5.61□□□□□ -1.51
ATXN3-208ENST00000504047 COL13A1Q5TAT6 717 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-208ENST00000504047 CEP135Q66GS9 1140 aa5.61□□□□□ -1.51
ATXN3-208ENST00000504047 GDF6Q6KF10 455 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-208ENST00000504047 ZSCAN29Q8IWY8 852 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-208ENST00000504047 SUV39H2Q9H5I1 410 aa5.61□□□□□ -1.51
ATXN3-208ENST00000504047 ZFYVE28Q9HCC9 887 aa5.61□□□□□ -1.51
ATXN3-208ENST00000504047 FOXD3Q9UJU5 478 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-208ENST00000504047 EREGO14944 169 aa5.6□□□□□ -1.51
ATXN3-208ENST00000504047 CPNE3O75131 537 aaKnown RBP5.6□□□□□ -1.51
ATXN3-208ENST00000504047 SPATA31C1P0DKV0 1188 aa5.6□□□□□ -1.51
ATXN3-208ENST00000504047 COL9A3Q14050 684 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-208ENST00000504047 CEP120Q8N960 986 aa5.6□□□□□ -1.51
ATXN3-208ENST00000504047 DCAF11Q8TEB1 546 aa5.6□□□□□ -1.51
ATXN3-208ENST00000504047 PBX4Q9BYU1 374 aa5.6□□□□□ -1.51
ATXN3-208ENST00000504047 NIF3L1Q9GZT8 377 aa5.6□□□□□ -1.51
ATXN3-208ENST00000504047 MUC3BQ9H195 1237 aa5.6□□□□□ -1.51
ATXN3-208ENST00000504047 RASSF4Q9H2L5 321 aa5.6□□□□□ -1.51
ATXN3-208ENST00000504047 CHRDQ9H2X0 955 aa5.6□□□□□ -1.51
ATXN3-208ENST00000504047 APBA3O96018 575 aa5.59□□□□□ -1.51
ATXN3-208ENST00000504047 PTPRAP18433 802 aa5.59□□□□□ -1.51
ATXN3-208ENST00000504047 ATP11AP98196 1134 aa5.59□□□□□ -1.51
ATXN3-208ENST00000504047 GRIK5Q16478 980 aa5.59□□□□□ -1.51
ATXN3-208ENST00000504047 DMRTC2Q8IXT2 367 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-208ENST00000504047 DTWD1Q8N5C7 304 aa5.59□□□□□ -1.51
ATXN3-208ENST00000504047 IL22RA1Q8N6P7 574 aa5.59□□□□□ -1.51
ATXN3-208ENST00000504047 ALKBH8Q96BT7 664 aaKnown RBP5.59□□□□□ -1.51
ATXN3-208ENST00000504047 DCAF5Q96JK2 942 aa5.59□□□□□ -1.51
ATXN3-208ENST00000504047 NACC1Q96RE7 527 aa5.59□□□□□ -1.51
ATXN3-208ENST00000504047 DNAJC25Q9H1X3 360 aa5.59□□□□□ -1.51
ATXN3-208ENST00000504047 A0A0A0MRY4 1105 aa5.58□□□□□ -1.52
ATXN3-208ENST00000504047 GPR182O15218 404 aa5.58□□□□□ -1.52
ATXN3-208ENST00000504047 COL8A1P27658 744 aa5.58□□□□□ -1.52
ATXN3-208ENST00000504047 GSK3AP49840 483 aa5.58□□□□□ -1.52
ATXN3-208ENST00000504047 FAM117BQ6P1L5 589 aa5.58□□□□□ -1.52
ATXN3-208ENST00000504047 SND1Q7KZF4 910 aaKnown RBP eCLIP5.58□□□□□ -1.52
ATXN3-208ENST00000504047 TMC7Q7Z402 723 aa5.58□□□□□ -1.52
ATXN3-208ENST00000504047 OSMRQ99650 979 aa5.58□□□□□ -1.52
ATXN3-208ENST00000504047 SRA1Q9HD15 236 aaKnown RBP5.58□□□□□ -1.52
ATXN3-208ENST00000504047 DZANK1Q9NVP4 752 aa5.58□□□□□ -1.52
ATXN3-208ENST00000504047 TRIM33Q9UPN9 1127 aa5.58□□□□□ -1.52
ATXN3-208ENST00000504047 PPME1Q9Y570 386 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms