RNA–Protein interactions for RNA: ENST00000504010.5

NR1I3-219, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 944 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-219ENST00000504010 ZC3H15Q8WU90 426 aaKnown RBP11.49□□□□□ -0.57
NR1I3-219ENST00000504010 DNAAF4Q8WXU2 420 aa11.49□□□□□ -0.57
NR1I3-219ENST00000504010 MKI67P46013 3256 aaKnown RBP11.48□□□□□ -0.57
NR1I3-219ENST00000504010 ERVV-1B6SEH8 477 aa11.48□□□□□ -0.57
NR1I3-219ENST00000504010 IGKV5-2P06315 115 aa11.48□□□□□ -0.57
NR1I3-219ENST00000504010 MKRN4PQ13434 485 aaPredicted RBP11.48□□□□□ -0.57
NR1I3-219ENST00000504010 ZNF34Q8IZ26 560 aa11.48□□□□□ -0.57
NR1I3-219ENST00000504010 METTL22Q9BUU2 404 aaPredicted RBP11.48□□□□□ -0.57
NR1I3-219ENST00000504010 VPS33BQ9H267 617 aa11.48□□□□□ -0.57
NR1I3-219ENST00000504010 PGAP2Q9UHJ9 254 aa11.48□□□□□ -0.57
NR1I3-219ENST00000504010 CDHR2Q9BYE9 1310 aa11.48□□□□□ -0.57
NR1I3-219ENST00000504010 A0A0C4DFX4 3053 aa11.47□□□□□ -0.57
NR1I3-219ENST00000504010 RLBP1P12271 317 aa11.47□□□□□ -0.57
NR1I3-219ENST00000504010 C20orf194Q5TEA3 1177 aa11.47□□□□□ -0.57
NR1I3-219ENST00000504010 OLFM4Q6UX06 510 aa11.47□□□□□ -0.57
NR1I3-219ENST00000504010 LARGE2Q8N3Y3 721 aa11.47□□□□□ -0.57
NR1I3-219ENST00000504010 CHMP4AQ9BY43 222 aa11.47□□□□□ -0.57
NR1I3-219ENST00000504010 GPRC5DQ9NZD1 345 aa11.47□□□□□ -0.57
NR1I3-219ENST00000504010 TRIM27P14373 513 aa11.46□□□□□ -0.57
NR1I3-219ENST00000504010 IRX6P78412 446 aaPredicted RBP11.46□□□□□ -0.57
NR1I3-219ENST00000504010 CRY2Q49AN0 593 aa11.46□□□□□ -0.57
NR1I3-219ENST00000504010 ZKSCAN2Q63HK3 967 aa11.46□□□□□ -0.57
NR1I3-219ENST00000504010 CDC37L1Q7L3B6 337 aa11.46□□□□□ -0.57
NR1I3-219ENST00000504010 NLRP10Q86W26 655 aa11.46□□□□□ -0.57
NR1I3-219ENST00000504010 NIM1KQ8IY84 436 aa11.46□□□□□ -0.57
NR1I3-219ENST00000504010 PANK1Q8TE04 598 aa11.46□□□□□ -0.57
NR1I3-219ENST00000504010 ISCA1Q9BUE6 129 aa11.46□□□□□ -0.57
NR1I3-219ENST00000504010 SUPT16HQ9Y5B9 1047 aaKnown RBP11.46□□□□□ -0.57
NR1I3-219ENST00000504010 AKAP11Q9UKA4 1901 aa11.45□□□□□ -0.58
NR1I3-219ENST00000504010 HCLS1P14317 486 aaPredicted RBP11.45□□□□□ -0.58
NR1I3-219ENST00000504010 PKN2Q16513 984 aaKnown RBP11.45□□□□□ -0.58
NR1I3-219ENST00000504010 BEND3Q5T5X7 828 aa11.45□□□□□ -0.58
NR1I3-219ENST00000504010 CTU1Q7Z7A3 348 aaKnown RBP11.45□□□□□ -0.58
NR1I3-219ENST00000504010 CCDC102AQ96A19 550 aa11.45□□□□□ -0.58
NR1I3-219ENST00000504010 FAM89AQ96GI7 184 aa11.45□□□□□ -0.58
NR1I3-219ENST00000504010 TRMT112Q9UI30 125 aaKnown RBP11.45□□□□□ -0.58
NR1I3-219ENST00000504010 COL4A5P29400 1685 aa11.45□□□□□ -0.58
NR1I3-219ENST00000504010 ABCC12Q96J65 1359 aa11.44□□□□□ -0.58
NR1I3-219ENST00000504010 PTPRCP08575 1304 aa11.44□□□□□ -0.58
NR1I3-219ENST00000504010 KIF16BQ96L93 1317 aa11.44□□□□□ -0.58
NR1I3-219ENST00000504010 NEURL1BA8MQ27 555 aa11.44□□□□□ -0.58
NR1I3-219ENST00000504010 NTSR2O95665 410 aa11.44□□□□□ -0.58
NR1I3-219ENST00000504010 GTF2E1P29083 439 aaPredicted RBP11.44□□□□□ -0.58
NR1I3-219ENST00000504010 HOXA10P31260 410 aaPredicted RBP11.44□□□□□ -0.58
NR1I3-219ENST00000504010 NEXNQ0ZGT2 675 aa11.44□□□□□ -0.58
NR1I3-219ENST00000504010 HSP90AB3PQ58FF7 597 aa11.44□□□□□ -0.58
NR1I3-219ENST00000504010 ATF7IPQ6VMQ6 1270 aa11.44□□□□□ -0.58
NR1I3-219ENST00000504010 C3orf67Q6ZVT6 689 aa11.44□□□□□ -0.58
NR1I3-219ENST00000504010 REM2Q8IYK8 340 aaPredicted RBP11.44□□□□□ -0.58
NR1I3-219ENST00000504010 TMEM57Q8N5G2 664 aa11.44□□□□□ -0.58
NR1I3-219ENST00000504010 CCDC85AQ96PX6 553 aaPredicted RBP11.44□□□□□ -0.58
NR1I3-219ENST00000504010 UTP14AQ9BVJ6 771 aaKnown RBP11.44□□□□□ -0.58
NR1I3-219ENST00000504010 GLIS2Q9BZE0 524 aaPredicted RBP11.44□□□□□ -0.58
NR1I3-219ENST00000504010 API5Q9BZZ5 524 aaKnown RBP11.44□□□□□ -0.58
NR1I3-219ENST00000504010 NYXQ9GZU5 481 aa11.44□□□□□ -0.58
NR1I3-219ENST00000504010 ANKRD36CQ5JPF3 1778 aa11.44□□□□□ -0.58
NR1I3-219ENST00000504010 HUNKP57058 714 aa11.43□□□□□ -0.58
NR1I3-219ENST00000504010 SRCIN1Q9C0H9 1055 aa11.43□□□□□ -0.58
NR1I3-219ENST00000504010 TMX4Q9H1E5 349 aaPredicted RBP11.43□□□□□ -0.58
NR1I3-219ENST00000504010 CWC25Q9NXE8 425 aaPredicted RBP11.43□□□□□ -0.58
NR1I3-219ENST00000504010 RIC1Q4ADV7 1423 aa11.43□□□□□ -0.58
NR1I3-219ENST00000504010 CACNA1FO60840 1977 aa11.42□□□□□ -0.58
NR1I3-219ENST00000504010 IPO8O15397 1037 aaKnown RBP11.42□□□□□ -0.58
NR1I3-219ENST00000504010 RRP1P56182 461 aaKnown RBP11.42□□□□□ -0.58
NR1I3-219ENST00000504010 GCKRQ14397 625 aa11.42□□□□□ -0.58
NR1I3-219ENST00000504010 RGMBQ6NW40 437 aa11.42□□□□□ -0.58
NR1I3-219ENST00000504010 UBE3BQ7Z3V4 1068 aa11.42□□□□□ -0.58
NR1I3-219ENST00000504010 PPP1R42Q7Z4L9 355 aa11.42□□□□□ -0.58
NR1I3-219ENST00000504010 FTSJ3Q8IY81 847 aaKnown RBP11.42□□□□□ -0.58
NR1I3-219ENST00000504010 DZIP1LQ8IYY4 767 aaKnown RBP11.42□□□□□ -0.58
NR1I3-219ENST00000504010 LINS1Q8NG48 757 aa11.42□□□□□ -0.58
NR1I3-219ENST00000504010 RPGRQ92834 1020 aaKnown RBP11.42□□□□□ -0.58
NR1I3-219ENST00000504010 ZNF408Q9H9D4 720 aa11.42□□□□□ -0.58
NR1I3-219ENST00000504010 ZNRF3Q9ULT6 936 aa11.42□□□□□ -0.58
NR1I3-219ENST00000504010 COG6Q9Y2V7 657 aa11.42□□□□□ -0.58
NR1I3-219ENST00000504010 ABCC4O15439 1325 aa11.41□□□□□ -0.58
NR1I3-219ENST00000504010 PPIP5K2O43314 1243 aa11.41□□□□□ -0.58
NR1I3-219ENST00000504010 PARP10Q53GL7 1025 aa11.41□□□□□ -0.58
NR1I3-219ENST00000504010 SLC51AQ86UW1 340 aa11.41□□□□□ -0.58
NR1I3-219ENST00000504010 ITPRIPQ8IWB1 547 aa11.41□□□□□ -0.58
NR1I3-219ENST00000504010 SUPT20HQ8NEM7 779 aa11.41□□□□□ -0.58
NR1I3-219ENST00000504010 CRAMP1Q96RY5 1269 aa11.41□□□□□ -0.58
NR1I3-219ENST00000504010 RNF186Q9NXI6 227 aa11.41□□□□□ -0.58
NR1I3-219ENST00000504010 HTTP42858 3142 aa11.41□□□□□ -0.58
NR1I3-219ENST00000504010 CENPFP49454 3210 aa11.41□□□□□ -0.58
NR1I3-219ENST00000504010 FAM155AB1AL88 458 aaPredicted RBP11.4□□□□□ -0.58
NR1I3-219ENST00000504010 IRS4O14654 1257 aaPredicted RBP11.4□□□□□ -0.58
NR1I3-219ENST00000504010 TRPA1O75762 1119 aa11.4□□□□□ -0.58
NR1I3-219ENST00000504010 NBPF7P0C2Y1 421 aaPredicted RBP11.4□□□□□ -0.58
NR1I3-219ENST00000504010 GMPSP49915 693 aaPredicted RBP11.4□□□□□ -0.58
NR1I3-219ENST00000504010 CXCL9Q07325 125 aa11.4□□□□□ -0.58
NR1I3-219ENST00000504010 TNIP1Q15025 636 aa11.4□□□□□ -0.58
NR1I3-219ENST00000504010 HABP4Q5JVS0 413 aaKnown RBP11.4□□□□□ -0.58
NR1I3-219ENST00000504010 C2orf69Q8N8R5 385 aa11.4□□□□□ -0.58
NR1I3-219ENST00000504010 CCDC191Q8NCU4 936 aa11.4□□□□□ -0.58
NR1I3-219ENST00000504010 ARHGAP45Q92619 1136 aa11.4□□□□□ -0.58
NR1I3-219ENST00000504010 SUCLG2Q96I99 432 aa11.4□□□□□ -0.58
NR1I3-219ENST00000504010 ZIC5Q96T25 663 aa11.4□□□□□ -0.58
NR1I3-219ENST00000504010 MEIS3Q99687 375 aa11.4□□□□□ -0.58
NR1I3-219ENST00000504010 C1orf115Q9H7X2 142 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms