RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 CNTNAP1P78357 1384 aa28.16■■■□□ 2.1
LSM6-203ENST00000503982 NEURL1BA8MQ27 555 aa28.16■■■□□ 2.1
LSM6-203ENST00000503982 ECE2O60344 883 aa28.16■■■□□ 2.1
LSM6-203ENST00000503982 CTSWP56202 376 aa28.16■■■□□ 2.1
LSM6-203ENST00000503982 CDC5LQ99459 802 aaKnown RBP28.16■■■□□ 2.1
LSM6-203ENST00000503982 H7C1D1 291 aa28.15■■■□□ 2.1
LSM6-203ENST00000503982 UBE3BQ7Z3V4 1068 aa28.15■■■□□ 2.1
LSM6-203ENST00000503982 MYH16Q9H6N6 1097 aa28.15■■■□□ 2.1
LSM6-203ENST00000503982 VAMP4O75379 141 aa28.14■■■□□ 2.1
LSM6-203ENST00000503982 DNAAF4Q8WXU2 420 aa28.14■■■□□ 2.1
LSM6-203ENST00000503982 CNOT7Q9UIV1 285 aaKnown RBP28.14■■■□□ 2.1
LSM6-203ENST00000503982 ZBTB12Q9Y330 459 aaPredicted RBP28.14■■■□□ 2.1
LSM6-203ENST00000503982 PSMD14O00487 310 aa28.13■■■□□ 2.09
LSM6-203ENST00000503982 PAXIP1Q6ZW49 1069 aaPredicted RBP28.13■■■□□ 2.09
LSM6-203ENST00000503982 MICALL2Q8IY33 904 aa28.12■■■□□ 2.09
LSM6-203ENST00000503982 PODXL2Q9NZ53 605 aa28.12■■■□□ 2.09
LSM6-203ENST00000503982 FMR1Q06787 632 aaKnown RBP eCLIP28.11■■■□□ 2.09
LSM6-203ENST00000503982 DEFB115Q30KQ5 88 aa28.11■■■□□ 2.09
LSM6-203ENST00000503982 TRAF5O00463 557 aa28.1■■■□□ 2.09
LSM6-203ENST00000503982 VEGFBP49765 207 aa28.1■■■□□ 2.09
LSM6-203ENST00000503982 TTLL11Q8NHH1 800 aa28.1■■■□□ 2.09
LSM6-203ENST00000503982 GREM2Q9H772 168 aa28.1■■■□□ 2.09
LSM6-203ENST00000503982 SPINK5Q9NQ38 1064 aaPredicted RBP28.1■■■□□ 2.09
LSM6-203ENST00000503982 XDHP47989 1333 aa28.1■■■□□ 2.09
LSM6-203ENST00000503982 GCKRQ14397 625 aa28.09■■■□□ 2.09
LSM6-203ENST00000503982 SHTN1A0MZ66 631 aa28.08■■■□□ 2.09
LSM6-203ENST00000503982 H7C1W4 665 aa28.08■■■□□ 2.09
LSM6-203ENST00000503982 ATP2B4P23634 1241 aa28.08■■■□□ 2.09
LSM6-203ENST00000503982 IGHMBP2P38935 993 aaKnown RBP28.08■■■□□ 2.09
LSM6-203ENST00000503982 TRPM4Q8TD43 1214 aa28.08■■■□□ 2.09
LSM6-203ENST00000503982 GRM1Q13255 1194 aa28.07■■■□□ 2.08
LSM6-203ENST00000503982 RBM26Q5T8P6 1007 aaKnown RBP28.07■■■□□ 2.08
LSM6-203ENST00000503982 LINS1Q8NG48 757 aa28.07■■■□□ 2.08
LSM6-203ENST00000503982 ZNF408Q9H9D4 720 aa28.07■■■□□ 2.08
LSM6-203ENST00000503982 KCNQ5Q9NR82 932 aa28.07■■■□□ 2.08
LSM6-203ENST00000503982 PCNTO95613 3336 aa28.07■■■□□ 2.08
LSM6-203ENST00000503982 COL13A1Q5TAT6 717 aaPredicted RBP28.06■■■□□ 2.08
LSM6-203ENST00000503982 DPF2Q92785 391 aa28.06■■■□□ 2.08
LSM6-203ENST00000503982 AIDAQ96BJ3 306 aa28.06■■■□□ 2.08
LSM6-203ENST00000503982 GLIS2Q9BZE0 524 aaPredicted RBP28.06■■■□□ 2.08
LSM6-203ENST00000503982 SCN9AQ15858 1988 aa28.06■■■□□ 2.08
LSM6-203ENST00000503982 RPS12P25398 132 aaKnown RBP28.05■■■□□ 2.08
LSM6-203ENST00000503982 TBC1D10BQ4KMP7 808 aaPredicted RBP28.05■■■□□ 2.08
LSM6-203ENST00000503982 SAMD7Q7Z3H4 446 aa28.05■■■□□ 2.08
LSM6-203ENST00000503982 RTL9Q8NET4 1388 aa28.04■■■□□ 2.08
LSM6-203ENST00000503982 F6X3S4 739 aa28.04■■■□□ 2.08
LSM6-203ENST00000503982 HIRAP54198 1017 aaPredicted RBP28.04■■■□□ 2.08
LSM6-203ENST00000503982 ZC3H15Q8WU90 426 aaKnown RBP28.04■■■□□ 2.08
LSM6-203ENST00000503982 BSDC1Q9NW68 430 aaPredicted RBP28.04■■■□□ 2.08
LSM6-203ENST00000503982 RASSF10A6NK89 507 aa28.03■■■□□ 2.08
LSM6-203ENST00000503982 CELF2O95319 508 aaKnown RBP28.03■■■□□ 2.08
LSM6-203ENST00000503982 ITGA6P23229 1130 aa28.03■■■□□ 2.08
LSM6-203ENST00000503982 MPHOSPH8Q99549 860 aa28.03■■■□□ 2.08
LSM6-203ENST00000503982 MINPP1Q9UNW1 487 aa28.03■■■□□ 2.08
LSM6-203ENST00000503982 CHMP3Q9Y3E7 222 aa28.03■■■□□ 2.08
LSM6-203ENST00000503982 POLR2AP24928 1970 aaKnown RBP28.02■■■□□ 2.08
LSM6-203ENST00000503982 WDR33Q9C0J8 1336 aaKnown RBP28.02■■■□□ 2.08
LSM6-203ENST00000503982 CDC37L1Q7L3B6 337 aa28.02■■■□□ 2.08
LSM6-203ENST00000503982 FBXW7Q969H0 707 aa28.02■■■□□ 2.08
LSM6-203ENST00000503982 FAM161AQ3B820 660 aa28.01■■■□□ 2.07
LSM6-203ENST00000503982 PSME4Q14997 1843 aa28.01■■■□□ 2.07
LSM6-203ENST00000503982 CST9Q5W186 159 aa28■■■□□ 2.07
LSM6-203ENST00000503982 SLC4A10Q6U841 1118 aa28■■■□□ 2.07
LSM6-203ENST00000503982 USP48Q86UV5 1035 aa28■■■□□ 2.07
LSM6-203ENST00000503982 PLA2G12BQ9BX93 195 aa28■■■□□ 2.07
LSM6-203ENST00000503982 VIL1P09327 827 aaKnown RBP27.99■■■□□ 2.07
LSM6-203ENST00000503982 ECE1P42892 770 aa27.99■■■□□ 2.07
LSM6-203ENST00000503982 CCT4P50991 539 aaKnown RBP27.99■■■□□ 2.07
LSM6-203ENST00000503982 TNS4Q8IZW8 715 aa27.99■■■□□ 2.07
LSM6-203ENST00000503982 PGAP2Q9UHJ9 254 aa27.99■■■□□ 2.07
LSM6-203ENST00000503982 ANKRD18BA2A2Z9 1011 aa27.98■■■□□ 2.07
LSM6-203ENST00000503982 KCNJ4P48050 445 aa27.98■■■□□ 2.07
LSM6-203ENST00000503982 CASP7P55210 303 aa27.98■■■□□ 2.07
LSM6-203ENST00000503982 KIF4BQ2VIQ3 1234 aa27.98■■■□□ 2.07
LSM6-203ENST00000503982 DIEXFQ68CQ4 756 aaKnown RBP27.98■■■□□ 2.07
LSM6-203ENST00000503982 CYP4F22Q6NT55 531 aa27.98■■■□□ 2.07
LSM6-203ENST00000503982 DCPSQ96C86 337 aaKnown RBP27.98■■■□□ 2.07
LSM6-203ENST00000503982 BEND3Q5T5X7 828 aa27.97■■■□□ 2.07
LSM6-203ENST00000503982 RSBN1LQ6PCB5 846 aaPredicted RBP27.97■■■□□ 2.07
LSM6-203ENST00000503982 CAPNS2Q96L46 248 aa27.97■■■□□ 2.07
LSM6-203ENST00000503982 ANKRD2Q9GZV1 360 aa27.97■■■□□ 2.07
LSM6-203ENST00000503982 TLL2Q9Y6L7 1015 aa27.97■■■□□ 2.07
LSM6-203ENST00000503982 MED23Q9ULK4 1368 aa27.97■■■□□ 2.07
LSM6-203ENST00000503982 FOXN1O15353 648 aa27.96■■■□□ 2.07
LSM6-203ENST00000503982 EGFRP00533 1210 aa27.96■■■□□ 2.07
LSM6-203ENST00000503982 PODNQ7Z5L7 613 aa27.96■■■□□ 2.07
LSM6-203ENST00000503982 C9orf78Q9NZ63 289 aaPredicted RBP27.96■■■□□ 2.07
LSM6-203ENST00000503982 USP17L3A6NCW0 530 aa27.95■■■□□ 2.06
LSM6-203ENST00000503982 USP17L4A6NCW7 530 aa27.95■■■□□ 2.06
LSM6-203ENST00000503982 WTIPA6NIX2 430 aaPredicted RBP27.95■■■□□ 2.06
LSM6-203ENST00000503982 CSF1RP07333 972 aa27.95■■■□□ 2.06
LSM6-203ENST00000503982 TAF7LQ5H9L4 462 aa27.95■■■□□ 2.06
LSM6-203ENST00000503982 USP17L1Q7RTZ2 530 aa27.95■■■□□ 2.06
LSM6-203ENST00000503982 KRT26Q7Z3Y9 468 aa27.95■■■□□ 2.06
LSM6-203ENST00000503982 LEMD3Q9Y2U8 911 aa27.95■■■□□ 2.06
LSM6-203ENST00000503982 IFIT5Q13325 482 aaKnown RBP27.94■■■□□ 2.06
LSM6-203ENST00000503982 AGBL3Q8NEM8 1001 aa27.94■■■□□ 2.06
LSM6-203ENST00000503982 CCER2I3L3R5 266 aa27.93■■■□□ 2.06
LSM6-203ENST00000503982 SRCIN1Q9C0H9 1055 aa27.93■■■□□ 2.06
LSM6-203ENST00000503982 ZNF804BA4D1E1 1349 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms