RNA–Protein interactions for RNA: ENST00000503738.5

GPN1-209, Transcript of GPN-loop GTPase 1, humanhuman

TSL 5 BASIC

Gene GPN1, Length 984 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-209ENST00000503738 SULF1Q8IWU6 871 aa12.54□□□□□ -0.4
GPN1-209ENST00000503738 PITPNM2Q9BZ72 1349 aa12.54□□□□□ -0.4
GPN1-209ENST00000503738 SHTN1A0MZ66 631 aa12.53□□□□□ -0.4
GPN1-209ENST00000503738 TBC1D10BQ4KMP7 808 aaPredicted RBP12.53□□□□□ -0.4
GPN1-209ENST00000503738 TRMT112Q9UI30 125 aaKnown RBP12.53□□□□□ -0.4
GPN1-209ENST00000503738 ZBTB12Q9Y330 459 aaPredicted RBP12.53□□□□□ -0.4
GPN1-209ENST00000503738 RTL9Q8NET4 1388 aa12.53□□□□□ -0.4
GPN1-209ENST00000503738 ECE2O60344 883 aa12.52□□□□□ -0.41
GPN1-209ENST00000503738 VIL1P09327 827 aaKnown RBP12.52□□□□□ -0.41
GPN1-209ENST00000503738 HCLS1P14317 486 aaPredicted RBP12.52□□□□□ -0.41
GPN1-209ENST00000503738 KIF4BQ2VIQ3 1234 aa12.52□□□□□ -0.41
GPN1-209ENST00000503738 RASAL3Q86YV0 1011 aa12.52□□□□□ -0.41
GPN1-209ENST00000503738 CFHR5Q9BXR6 569 aa12.52□□□□□ -0.41
GPN1-209ENST00000503738 PODXL2Q9NZ53 605 aa12.52□□□□□ -0.41
GPN1-209ENST00000503738 HPS5Q9UPZ3 1129 aa12.52□□□□□ -0.41
GPN1-209ENST00000503738 ZNF646O15015 1829 aaPredicted RBP12.51□□□□□ -0.41
GPN1-209ENST00000503738 ADM5C9JUS6 153 aa12.51□□□□□ -0.41
GPN1-209ENST00000503738 EGFRP00533 1210 aa12.51□□□□□ -0.41
GPN1-209ENST00000503738 ZNF280AP59817 542 aaPredicted RBP12.51□□□□□ -0.41
GPN1-209ENST00000503738 AGBL3Q8NEM8 1001 aa12.51□□□□□ -0.41
GPN1-209ENST00000503738 CDCA5Q96FF9 252 aa12.51□□□□□ -0.41
GPN1-209ENST00000503738 DBNDD1Q9H9R9 158 aa12.51□□□□□ -0.41
GPN1-209ENST00000503738 GGA3Q9NZ52 723 aa12.51□□□□□ -0.41
GPN1-209ENST00000503738 TSPYL4Q9UJ04 414 aa12.51□□□□□ -0.41
GPN1-209ENST00000503738 COPS6Q7L5N1 327 aa12.5□□□□□ -0.41
GPN1-209ENST00000503738 POLLQ9UGP5 575 aa12.5□□□□□ -0.41
GPN1-209ENST00000503738 NSFL1CQ9UNZ2 370 aaKnown RBP12.5□□□□□ -0.41
GPN1-209ENST00000503738 MAPK8IP3Q9UPT6 1336 aa12.5□□□□□ -0.41
GPN1-209ENST00000503738 C6orf229H3BNL8 230 aa12.49□□□□□ -0.41
GPN1-209ENST00000503738 HOXB7P09629 217 aa12.49□□□□□ -0.41
GPN1-209ENST00000503738 HSP90B1P14625 803 aaKnown RBP12.49□□□□□ -0.41
GPN1-209ENST00000503738 TM4SF4P48230 202 aa12.49□□□□□ -0.41
GPN1-209ENST00000503738 MMP14P50281 582 aa12.49□□□□□ -0.41
GPN1-209ENST00000503738 TRIM28Q13263 835 aaKnown RBP12.49□□□□□ -0.41
GPN1-209ENST00000503738 PROSER3Q2NL68 480 aa12.49□□□□□ -0.41
GPN1-209ENST00000503738 FBXO46Q6PJ61 603 aaPredicted RBP12.49□□□□□ -0.41
GPN1-209ENST00000503738 THUMPD2Q9BTF0 503 aaKnown RBP12.49□□□□□ -0.41
GPN1-209ENST00000503738 COL4A1P02462 1669 aa12.48□□□□□ -0.41
GPN1-209ENST00000503738 EIF2S2P20042 333 aaKnown RBP12.48□□□□□ -0.41
GPN1-209ENST00000503738 LMOD3Q0VAK6 560 aa12.48□□□□□ -0.41
GPN1-209ENST00000503738 DLK2Q6UY11 383 aa12.48□□□□□ -0.41
GPN1-209ENST00000503738 PLBD2Q8NHP8 589 aa12.48□□□□□ -0.41
GPN1-209ENST00000503738 TBC1D16Q8TBP0 767 aa12.48□□□□□ -0.41
GPN1-209ENST00000503738 XAGE3Q8WTP9 111 aa12.48□□□□□ -0.41
GPN1-209ENST00000503738 CELF1Q92879 486 aaKnown RBP12.48□□□□□ -0.41
GPN1-209ENST00000503738 ISCA1Q9BUE6 129 aa12.48□□□□□ -0.41
GPN1-209ENST00000503738 ZC3H12CQ9C0D7 883 aaKnown RBP12.48□□□□□ -0.41
GPN1-209ENST00000503738 MYH3P11055 1940 aa12.47□□□□□ -0.41
GPN1-209ENST00000503738 RPS8P62241 208 aaKnown RBP12.47□□□□□ -0.41
GPN1-209ENST00000503738 GPSM2P81274 684 aa12.47□□□□□ -0.41
GPN1-209ENST00000503738 CNGB1Q14028 1251 aaPredicted RBP12.47□□□□□ -0.41
GPN1-209ENST00000503738 RSBN1LQ6PCB5 846 aaPredicted RBP12.47□□□□□ -0.41
GPN1-209ENST00000503738 ZNF296Q8WUU4 475 aaPredicted RBP12.47□□□□□ -0.41
GPN1-209ENST00000503738 GMLQ99445 158 aa12.47□□□□□ -0.41
GPN1-209ENST00000503738 HDAC9Q9UKV0 1011 aa12.47□□□□□ -0.41
GPN1-209ENST00000503738 ECM29Q5VYK3 1845 aa12.46□□□□□ -0.41
GPN1-209ENST00000503738 RIMBP2O15034 1052 aa12.46□□□□□ -0.41
GPN1-209ENST00000503738 SREBF2Q12772 1141 aa12.46□□□□□ -0.41
GPN1-209ENST00000503738 RBM26Q5T8P6 1007 aaKnown RBP12.46□□□□□ -0.41
GPN1-209ENST00000503738 ANGEL2Q5VTE6 544 aaKnown RBP12.46□□□□□ -0.41
GPN1-209ENST00000503738 GPR25O00155 361 aa12.45□□□□□ -0.42
GPN1-209ENST00000503738 ANXA1P04083 346 aa12.45□□□□□ -0.42
GPN1-209ENST00000503738 SCARF1Q14162 830 aa12.45□□□□□ -0.42
GPN1-209ENST00000503738 INTS3Q68E01 1043 aaKnown RBP12.45□□□□□ -0.42
GPN1-209ENST00000503738 ANKRD13DQ6ZTN6 518 aa12.45□□□□□ -0.42
GPN1-209ENST00000503738 PODNQ7Z5L7 613 aa12.45□□□□□ -0.42
GPN1-209ENST00000503738 MYOZ2Q9NPC6 264 aa12.45□□□□□ -0.42
GPN1-209ENST00000503738 KCNQ5Q9NR82 932 aa12.45□□□□□ -0.42
GPN1-209ENST00000503738 COL1A1P02452 1464 aaPredicted RBP12.45□□□□□ -0.42
GPN1-209ENST00000503738 HTTP42858 3142 aa12.44□□□□□ -0.42
GPN1-209ENST00000503738 ALDH1A1P00352 501 aa12.44□□□□□ -0.42
GPN1-209ENST00000503738 USP17L8P0C7I0 530 aa12.44□□□□□ -0.42
GPN1-209ENST00000503738 AIMP1Q12904 312 aaKnown RBP12.44□□□□□ -0.42
GPN1-209ENST00000503738 DOK7Q18PE1 504 aa12.44□□□□□ -0.42
GPN1-209ENST00000503738 DBF4Q9UBU7 674 aaPredicted RBP12.44□□□□□ -0.42
GPN1-209ENST00000503738 GGA1Q9UJY5 639 aa12.44□□□□□ -0.42
GPN1-209ENST00000503738 ASTN2O75129 1339 aaPredicted RBP12.43□□□□□ -0.42
GPN1-209ENST00000503738 MYO3BQ8WXR4 1341 aa12.43□□□□□ -0.42
GPN1-209ENST00000503738 G3V3G9 751 aa12.43□□□□□ -0.42
GPN1-209ENST00000503738 IRS4O14654 1257 aaPredicted RBP12.43□□□□□ -0.42
GPN1-209ENST00000503738 FKTNO75072 461 aa12.43□□□□□ -0.42
GPN1-209ENST00000503738 NF2P35240 595 aa12.43□□□□□ -0.42
GPN1-209ENST00000503738 DCAF8Q5TAQ9 597 aa12.43□□□□□ -0.42
GPN1-209ENST00000503738 FAM89AQ96GI7 184 aa12.43□□□□□ -0.42
GPN1-209ENST00000503738 XDHP47989 1333 aa12.42□□□□□ -0.42
GPN1-209ENST00000503738 USP17L3A6NCW0 530 aa12.42□□□□□ -0.42
GPN1-209ENST00000503738 USP17L4A6NCW7 530 aa12.42□□□□□ -0.42
GPN1-209ENST00000503738 CHL1O00533 1208 aa12.42□□□□□ -0.42
GPN1-209ENST00000503738 UFL1O94874 794 aa12.42□□□□□ -0.42
GPN1-209ENST00000503738 RIPK4P57078 832 aa12.42□□□□□ -0.42
GPN1-209ENST00000503738 INHBEP58166 350 aa12.42□□□□□ -0.42
GPN1-209ENST00000503738 USP17L1Q7RTZ2 530 aa12.42□□□□□ -0.42
GPN1-209ENST00000503738 ZBTB38Q8NAP3 1195 aaPredicted RBP12.42□□□□□ -0.42
GPN1-209ENST00000503738 HYPKQ9NX55 129 aa12.42□□□□□ -0.42
GPN1-209ENST00000503738 MED23Q9ULK4 1368 aa12.42□□□□□ -0.42
GPN1-209ENST00000503738 UNCXA6NJT0 531 aa12.41□□□□□ -0.42
GPN1-209ENST00000503738 TBC1D8O95759 1140 aa12.41□□□□□ -0.42
GPN1-209ENST00000503738 CCDC152Q4G0S7 254 aa12.41□□□□□ -0.42
GPN1-209ENST00000503738 HABP4Q5JVS0 413 aaKnown RBP12.41□□□□□ -0.42
GPN1-209ENST00000503738 CHPF2Q9P2E5 772 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms