RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 NUTM2EB1AL46 878 aaPredicted RBP26.88■■□□□ 1.89
PCDH1-204ENST00000503492 NUTM2AQ8IVF1 878 aaPredicted RBP26.88■■□□□ 1.89
PCDH1-204ENST00000503492 MARCH10Q8NA82 808 aaPredicted RBP26.88■■□□□ 1.89
PCDH1-204ENST00000503492 ACSBG1Q96GR2 724 aa26.88■■□□□ 1.89
PCDH1-204ENST00000503492 TCEANC2Q96MN5 208 aa26.88■■□□□ 1.89
PCDH1-204ENST00000503492 AKAP2Q9Y2D5 859 aa26.88■■□□□ 1.89
PCDH1-204ENST00000503492 U3KPZ7 1027 aaPredicted RBP26.88■■□□□ 1.89
PCDH1-204ENST00000503492 SYT1P21579 422 aa26.87■■□□□ 1.89
PCDH1-204ENST00000503492 CTSWP56202 376 aa26.87■■□□□ 1.89
PCDH1-204ENST00000503492 TICAM2Q86XR7 235 aa26.87■■□□□ 1.89
PCDH1-204ENST00000503492 XAGE2Q96GT9 111 aa26.87■■□□□ 1.89
PCDH1-204ENST00000503492 ALDH8A1Q9H2A2 487 aaPredicted RBP26.87■■□□□ 1.89
PCDH1-204ENST00000503492 GREM2Q9H772 168 aa26.87■■□□□ 1.89
PCDH1-204ENST00000503492 HELLSQ9NRZ9 838 aa26.87■■□□□ 1.89
PCDH1-204ENST00000503492 ITGA6P23229 1130 aa26.86■■□□□ 1.89
PCDH1-204ENST00000503492 ZMYM1Q5SVZ6 1142 aa26.86■■□□□ 1.89
PCDH1-204ENST00000503492 TRMT112Q9UI30 125 aaKnown RBP26.86■■□□□ 1.89
PCDH1-204ENST00000503492 SPATA31A5Q5VU36 1347 aa26.86■■□□□ 1.89
PCDH1-204ENST00000503492 SPATA31A7Q8IWB4 1347 aa26.86■■□□□ 1.89
PCDH1-204ENST00000503492 SPEF2Q9C093 1822 aa26.86■■□□□ 1.89
PCDH1-204ENST00000503492 A0A0G2JS52 829 aa26.86■■□□□ 1.89
PCDH1-204ENST00000503492 IRS4O14654 1257 aaPredicted RBP26.86■■□□□ 1.89
PCDH1-204ENST00000503492 NECAB1Q8N987 351 aa26.86■■□□□ 1.89
PCDH1-204ENST00000503492 STX6O43752 255 aa26.85■■□□□ 1.89
PCDH1-204ENST00000503492 DTNBO60941 627 aa26.85■■□□□ 1.89
PCDH1-204ENST00000503492 GJB2P29033 226 aa26.85■■□□□ 1.89
PCDH1-204ENST00000503492 RIPOR2Q9Y4F9 1068 aa26.85■■□□□ 1.89
PCDH1-204ENST00000503492 UBN2Q6ZU65 1347 aa26.85■■□□□ 1.89
PCDH1-204ENST00000503492 RIC1Q4ADV7 1423 aa26.85■■□□□ 1.89
PCDH1-204ENST00000503492 ZSCAN22P10073 491 aaPredicted RBP26.85■■□□□ 1.89
PCDH1-204ENST00000503492 TOB2Q14106 344 aaPredicted RBP26.85■■□□□ 1.89
PCDH1-204ENST00000503492 KRT32Q14532 448 aa26.85■■□□□ 1.89
PCDH1-204ENST00000503492 FOXD4L6Q3SYB3 417 aaPredicted RBP26.85■■□□□ 1.89
PCDH1-204ENST00000503492 CCDC158Q5M9N0 1113 aa26.85■■□□□ 1.89
PCDH1-204ENST00000503492 INTS5Q6P9B9 1019 aaKnown RBP26.85■■□□□ 1.89
PCDH1-204ENST00000503492 FOXD4L3Q6VB84 417 aaPredicted RBP26.85■■□□□ 1.89
PCDH1-204ENST00000503492 NSFL1CQ9UNZ2 370 aaKnown RBP26.85■■□□□ 1.89
PCDH1-204ENST00000503492 CYP21A2P08686 494 aa26.84■■□□□ 1.89
PCDH1-204ENST00000503492 ANKRD1Q15327 319 aa26.84■■□□□ 1.89
PCDH1-204ENST00000503492 ZNF34Q8IZ26 560 aa26.84■■□□□ 1.89
PCDH1-204ENST00000503492 MYH3P11055 1940 aa26.84■■□□□ 1.89
PCDH1-204ENST00000503492 EIF5P55010 431 aaKnown RBP26.84■■□□□ 1.89
PCDH1-204ENST00000503492 TTC39AQ5SRH9 613 aa26.84■■□□□ 1.89
PCDH1-204ENST00000503492 GORABQ5T7V8 394 aa26.84■■□□□ 1.89
PCDH1-204ENST00000503492 ZSCAN23Q3MJ62 389 aa26.83■■□□□ 1.89
PCDH1-204ENST00000503492 RBM27Q9P2N5 1060 aaKnown RBP26.83■■□□□ 1.89
PCDH1-204ENST00000503492 RNF113AO15541 343 aaKnown RBP26.83■■□□□ 1.88
PCDH1-204ENST00000503492 ZNF445P59923 1031 aa26.83■■□□□ 1.88
PCDH1-204ENST00000503492 LDHAL6AQ6ZMR3 332 aa26.83■■□□□ 1.88
PCDH1-204ENST00000503492 ANKRD18BA2A2Z9 1011 aa26.82■■□□□ 1.88
PCDH1-204ENST00000503492 ATP6V1AP38606 617 aa26.82■■□□□ 1.88
PCDH1-204ENST00000503492 FKBP4Q02790 459 aaKnown RBP eCLIP26.82■■□□□ 1.88
PCDH1-204ENST00000503492 NEK1Q96PY6 1258 aa26.82■■□□□ 1.88
PCDH1-204ENST00000503492 CCDC87Q9NVE4 849 aa26.82■■□□□ 1.88
PCDH1-204ENST00000503492 SLIT2O94813 1529 aa26.81■■□□□ 1.88
PCDH1-204ENST00000503492 PDE8AO60658 829 aa26.81■■□□□ 1.88
PCDH1-204ENST00000503492 PIP4K2BP78356 416 aa26.81■■□□□ 1.88
PCDH1-204ENST00000503492 SCARF1Q14162 830 aa26.81■■□□□ 1.88
PCDH1-204ENST00000503492 METTL24Q5JXM2 366 aa26.81■■□□□ 1.88
PCDH1-204ENST00000503492 MAST3O60307 1309 aa26.81■■□□□ 1.88
PCDH1-204ENST00000503492 CRKLP46109 303 aaKnown RBP26.8■■□□□ 1.88
PCDH1-204ENST00000503492 DSCC1Q9BVC3 393 aa26.8■■□□□ 1.88
PCDH1-204ENST00000503492 LOC102724428A0A0B4J2F2 783 aa26.8■■□□□ 1.88
PCDH1-204ENST00000503492 SIK1P57059 783 aa26.8■■□□□ 1.88
PCDH1-204ENST00000503492 ATP2B3Q16720 1220 aa26.8■■□□□ 1.88
PCDH1-204ENST00000503492 BARGINQ6ZT62 677 aa26.8■■□□□ 1.88
PCDH1-204ENST00000503492 GDPD2Q9HCC8 539 aa26.8■■□□□ 1.88
PCDH1-204ENST00000503492 TCHHQ07283 1943 aa26.8■■□□□ 1.88
PCDH1-204ENST00000503492 NWD2Q9ULI1 1742 aa26.8■■□□□ 1.88
PCDH1-204ENST00000503492 F13A1P00488 732 aa26.79■■□□□ 1.88
PCDH1-204ENST00000503492 TMEM63CQ9P1W3 806 aa26.79■■□□□ 1.88
PCDH1-204ENST00000503492 MBD3O95983 291 aa26.79■■□□□ 1.88
PCDH1-204ENST00000503492 ITPK1Q13572 414 aa26.79■■□□□ 1.88
PCDH1-204ENST00000503492 STOX1Q6ZVD7 989 aa26.78■■□□□ 1.88
PCDH1-204ENST00000503492 RTN4Q9NQC3 1192 aaKnown RBP26.78■■□□□ 1.88
PCDH1-204ENST00000503492 CNNM1Q9NRU3 951 aa26.78■■□□□ 1.88
PCDH1-204ENST00000503492 MTMR6Q9Y217 621 aa26.78■■□□□ 1.88
PCDH1-204ENST00000503492 VGLL2Q8N8G2 317 aa26.78■■□□□ 1.88
PCDH1-204ENST00000503492 M0R2C6 588 aa26.77■■□□□ 1.88
PCDH1-204ENST00000503492 HSPD1P10809 573 aaKnown RBP26.77■■□□□ 1.88
PCDH1-204ENST00000503492 USP48Q86UV5 1035 aa26.77■■□□□ 1.88
PCDH1-204ENST00000503492 ZAP70P43403 619 aa26.77■■□□□ 1.88
PCDH1-204ENST00000503492 OSBP2Q969R2 916 aa26.77■■□□□ 1.88
PCDH1-204ENST00000503492 SUSD4Q5VX71 490 aa26.76■■□□□ 1.87
PCDH1-204ENST00000503492 RREB1Q92766 1687 aa26.76■■□□□ 1.87
PCDH1-204ENST00000503492 GADD45BO75293 160 aaPredicted RBP26.75■■□□□ 1.87
PCDH1-204ENST00000503492 PI16Q6UXB8 463 aa26.75■■□□□ 1.87
PCDH1-204ENST00000503492 TMEM87AQ8NBN3 555 aa26.75■■□□□ 1.87
PCDH1-204ENST00000503492 CNPY2Q9Y2B0 182 aa26.75■■□□□ 1.87
PCDH1-204ENST00000503492 MYH14Q7Z406 1995 aaKnown RBP26.75■■□□□ 1.87
PCDH1-204ENST00000503492 Q6ZUG5 572 aa26.75■■□□□ 1.87
PCDH1-204ENST00000503492 ABCC12Q96J65 1359 aa26.74■■□□□ 1.87
PCDH1-204ENST00000503492 LAMA4Q16363 1823 aa26.74■■□□□ 1.87
PCDH1-204ENST00000503492 A0A0G2JLW4 131 aa26.74■■□□□ 1.87
PCDH1-204ENST00000503492 TOM1O60784 492 aa26.74■■□□□ 1.87
PCDH1-204ENST00000503492 CAMTA2O94983 1202 aa26.74■■□□□ 1.87
PCDH1-204ENST00000503492 STK3Q13188 491 aa26.73■■□□□ 1.87
PCDH1-204ENST00000503492 CICQ96RK0 1608 aaPredicted RBP26.73■■□□□ 1.87
PCDH1-204ENST00000503492 KCNQ2O43526 872 aa26.73■■□□□ 1.87
PCDH1-204ENST00000503492 LRRFIP1Q32MZ4 808 aaKnown RBP26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms